Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11711 Corylus avellana HOM05D010496 ORTHO05D010879 2.1e-160 568.9 284 100.0
Cfa008703 Carpinus fangiana HOM05D010496 ORTHO05D010879 2.5e-148 528.9 287 92.7
QL06p027780 Quercus lobata HOM05D010496 ORTHO05D010879 1.2e-91 340.5 294 62.6
CiPaw.01G109800 Carya illinoinensis HOM05D010496 ORTHO05D010879 2.4e-87 326.2 300 63.7
Prupe.1G176100 Prunus persica HOM05D010496 ORTHO05D010879 8.1e-51 204.9 300 43.7
MD04G1026500 Malus domestica HOM05D010496 ORTHO05D010879 4.8e-43 179.1 302 40.1
GSVIVG01031653001 Vitis vinifera HOM05D010496 ORTHO05D010879 1.0e-40 171.4 320 37.2
RcHm_v2.0_Chr4g0410661 Rosa chinensis HOM05D010496 ORTHO05D010879 5.1e-37 159.1 317 38.2
Glyma.20G243300 Glycine max HOM05D011141 ORTHO05D010879 1.4e-34 151.0 283 38.5
FAN12G2147 Fragaria x ananassa HOM05D010496 ORTHO05D010879 3.4e-33 146.4 325 35.4
Glyma.10G293200 Glycine max HOM05D011141 ORTHO05D010879 5.9e-33 145.6 289 37.4
FAN22G0913 Fragaria x ananassa HOM05D010496 ORTHO05D010879 6.5e-32 142.1 325 35.1
TAR365G1027 Trochodendron aralioides HOM05D010496 ORTHO05D010879 4.2e-31 139.4 302 36.4
FvH4_4g12430 Fragaria vesca HOM05D010496 ORTHO05D010879 9.3e-31 138.3 324 34.3
Duzib151G0883 Durio zibethinus HOM05D010496 ORTHO05D010879 2.1e-30 137.1 272 39.0
FAN07G2091 Fragaria x ananassa HOM05D010496 ORTHO05D010879 6.7e-29 132.1 298 34.6
Glyma.10G293000 Glycine max HOM05D011141 ORTHO05D010879 8.7e-29 131.7 285 37.5
TAR365G0164 Trochodendron aralioides HOM05D003788 ORTHO05D010879 1.1e-28 131.3 311 37.9
Lj2g0022590 Lotus japonicus HOM05D011141 ORTHO05D010879 3.7e-27 126.3 267 39.0
Glyma.20G243200 Glycine max HOM05D011141 ORTHO05D010879 8.2e-27 125.2 243 37.9
Phvul.007G007000 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 1.5e-25 120.9 279 32.6
arahy.Tifrunner.gnm1.ann1.R8V4SK Arachis hypogaea HOM05D011141 ORTHO05D010879 3.4e-25 119.8 290 33.8
arahy.Tifrunner.gnm1.ann1.P32IB9 Arachis hypogaea HOM05D011141 ORTHO05D010879 1.3e-24 117.9 297 32.3
Nn1g09760 Nelumbo nucifera HOM05D003788 ORTHO05D010879 2.2e-24 117.1 311 32.2
VMungo0720G3183 Vigna mungo HOM05D011141 ORTHO05D010879 1.1e-23 114.8 288 34.0
Gorai.006G226800 Gossypium raimondii HOM05D010496 ORTHO05D010879 1.6e-22 110.9 179 42.5
TPR.G10391 Trifolium pratense HOM05D011141 ORTHO05D010879 2.1e-22 110.5 213 38.0
Gohir.D09G202900 Gossypium hirsutum HOM05D010496 ORTHO05D010879 3.6e-22 109.8 179 41.9
Thecc.04G186900 Theobroma cacao HOM05D010496 ORTHO05D010879 7.9e-22 108.6 187 39.0
Gohir.A09G209500 Gossypium hirsutum HOM05D010496 ORTHO05D010879 1.0e-21 108.2 176 41.5
Medtr1g116100 Medicago truncatula HOM05D011141 ORTHO05D010879 5.1e-21 105.9 287 32.8
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 2.2e-19 100.5 219 36.1
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 6.9e-18 95.5 219 35.2
Sed0016606 Sechium edule HOM05D010496 ORTHO05D010879 1.2e-17 94.7 241 32.8
VMungo0720G2993 Vigna mungo HOM05D011141 ORTHO05D010879 1.5e-17 94.4 216 33.3
VMungo0720G1878 Vigna mungo HOM05D011141 ORTHO05D010879 5.0e-16 89.4 252 32.5
Aqoxy2G04009 Aquilegia oxysepala HOM05D003788 ORTHO05D010879 1.0e-13 81.6 258 28.3
Phvul.007G006800 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 7.4e-12 75.5 189 32.8
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 9.7e-12 75.1 185 32.4
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 9.7e-12 75.1 222 29.3
Phvul.007G006900 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 1.7e-11 74.3 180 33.9
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 4.8e-11 72.8 79 43.0
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 6.3e-11 72.4 60 46.7
EL10Ac3g07401 Beta vulgaris HOM05D010496 ORTHO05D010879 4.1e-10 69.7 41 68.3
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 5.3e-10 69.3 138 37.0
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 5.3e-10 69.3 50 56.0
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 7.0e-10 68.9 127 32.3
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 7.0e-10 68.9 75 42.7
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 7.0e-10 68.9 47 57.4
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 9.1e-10 68.6 165 34.5
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 2.0e-09 67.4 46 58.7
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 2.0e-09 67.4 113 37.2
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 2.6e-09 67.0 47 57.4
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 3.5e-09 66.6 70 41.4
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 4.5e-09 66.2 123 36.6
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 4.5e-09 66.2 113 35.4
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 4.5e-09 66.2 139 35.3
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 5.9e-09 65.9 246 30.1
Lalb_Chr06g0164061 Lupinus albus HOM05D011141 ORTHO05D010879 5.9e-09 65.9 178 32.6
PSO017G0918 Papaver somniferum HOM05D061670 ORTHO05D010879 5.9e-09 65.9 46 58.7
PSO675G9246 Papaver somniferum HOM05D061670 ORTHO05D010879 5.9e-09 65.9 46 58.7
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 7.7e-09 65.5 74 41.9
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 7.7e-09 65.5 139 33.8
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 7.7e-09 65.5 74 41.9
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 1.0e-08 65.1 164 31.1
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 1.3e-08 64.7 138 34.1
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 1.7e-08 64.3 77 42.9
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 1.7e-08 64.3 204 28.9
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 1.7e-08 64.3 141 29.8
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 2.2e-08 63.9 113 34.5
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 2.9e-08 63.5 261 28.4
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 3.8e-08 63.2 46 54.3
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 3.8e-08 63.2 79 40.5
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 5.0e-08 62.8 168 33.3
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 5.0e-08 62.8 184 29.3
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 6.5e-08 62.4 294 27.6
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 6.5e-08 62.4 100 35.0
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 8.5e-08 62.0 87 35.6
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 8.5e-08 62.0 145 29.7
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 1.1e-07 61.6 45 55.6
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 1.1e-07 61.6 143 30.8
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 1.5e-07 61.2 213 29.1
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 1.5e-07 61.2 213 29.1
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 1.5e-07 61.2 213 29.1
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.5e-07 61.2 78 37.2
CDE03G0063 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 1.5e-07 61.2 50 48.0
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 1.9e-07 60.8 164 31.7
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 1.9e-07 60.8 202 30.2
Phvul.005G092100 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 1.9e-07 60.8 112 32.1
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.9e-07 60.8 45 55.6
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 2.5e-07 60.5 69 40.6
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 2.5e-07 60.5 137 32.1
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 2.5e-07 60.5 145 29.0
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 3.2e-07 60.1 245 27.3
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 3.2e-07 60.1 72 40.3
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 3.2e-07 60.1 72 41.7
BraA02t05990Z Brassica rapa HOM05D003788 ORTHO05D004633 4.2e-07 59.7 72 40.3
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 4.2e-07 59.7 84 39.3
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 4.2e-07 59.7 196 29.6
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 7.2e-07 58.9 276 26.4
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 7.2e-07 58.9 137 32.1
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 7.2e-07 58.9 279 24.7
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 7.2e-07 58.9 289 24.9
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 7.2e-07 58.9 137 31.4
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 9.4e-07 58.5 79 35.4
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 9.4e-07 58.5 177 27.1
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 1.2e-06 58.2 64 40.6
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.2e-06 58.2 150 28.7
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.2e-06 58.2 190 26.8
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 1.2e-06 58.2 157 29.9
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 1.6e-06 57.8 56 42.9
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.6e-06 57.8 44 50.0
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 2.1e-06 57.4 72 38.9
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 2.1e-06 57.4 71 40.8
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 2.1e-06 57.4 71 40.8
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 2.1e-06 57.4 251 25.9
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 2.7e-06 57.0 257 25.7
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 3.6e-06 56.6 229 27.5
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 3.6e-06 56.6 152 27.6
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 4.7e-06 56.2 69 37.7
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 6.1e-06 55.8 165 26.1
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 6.1e-06 55.8 286 24.8
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 6.1e-06 55.8 221 25.8
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 8.0e-06 55.5 294 24.8
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 8.0e-06 55.5 184 27.2


User provided reference genes

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