Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 0.0e+00 1458.0 725 100.0
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 0.0e+00 1161.0 729 83.1
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 1.4e-256 889.8 719 64.8
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 7.7e-255 884.0 722 64.8
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 3.8e-254 881.7 706 64.7
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 1.3e-249 866.7 713 64.8
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 2.2e-249 865.9 745 62.1
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 1.1e-248 863.6 714 63.0
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.2e-247 860.1 676 65.7
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 2.6e-247 859.0 712 63.9
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 2.9e-246 855.5 708 62.6
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 3.8e-246 855.1 722 61.5
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 1.9e-245 852.8 717 63.0
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 2.5e-245 852.4 717 63.2
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 2.3e-243 845.9 727 61.8
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 8.8e-243 844.0 726 59.8
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 1.5e-242 843.2 728 61.5
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 7.5e-242 840.9 727 61.5
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 9.7e-242 840.5 718 61.8
CiPaw.01G113700 Carya illinoinensis HOM05D006559 ORTHO05D008867 4.5e-239 831.6 541 78.4
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 1.3e-238 830.1 718 62.4
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 2.9e-238 828.9 738 58.5
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 6.1e-236 821.2 725 61.1
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 1.0e-235 820.5 708 61.0
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 8.8e-235 817.4 721 61.3
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 4.4e-234 815.1 713 60.6
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 4.1e-232 808.5 719 58.8
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 5.4e-232 808.1 726 61.3
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 9.1e-232 807.4 722 60.4
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 1.5e-229 800.0 712 59.7
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 6.1e-228 794.7 743 58.8
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 1.8e-227 793.1 725 59.0
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 6.8e-227 791.2 718 59.2
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 1.5e-226 790.0 733 58.4
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 9.8e-226 787.3 747 57.0
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 9.8e-226 787.3 712 58.4
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 1.3e-225 786.9 727 58.0
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 2.2e-225 786.2 733 58.5
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 3.7e-225 785.4 727 58.2
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 4.9e-225 785.0 752 57.4
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 4.9e-225 785.0 729 59.4
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 8.3e-225 784.3 719 59.4
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 1.4e-224 783.5 704 58.4
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 1.8e-224 783.1 709 59.2
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 2.4e-224 782.7 744 57.4
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 1.6e-223 780.0 715 59.0
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 2.7e-223 779.2 709 59.2
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 5.9e-223 778.1 708 59.0
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 7.8e-223 777.7 739 56.7
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 2.5e-221 772.7 714 58.1
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 7.3e-221 771.2 714 58.5
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 9.5e-221 770.8 707 58.3
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.6e-220 770.0 747 55.3
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 2.1e-220 769.6 708 57.9
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 4.0e-219 765.4 708 57.8
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 4.4e-218 761.9 703 58.7
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 9.8e-218 760.8 700 57.7
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.3e-217 760.4 800 51.6
Lj6A690G72 Lonicera japonica HOM05D006559 ORTHO05D008867 3.2e-216 755.7 516 73.1
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 4.1e-216 755.4 704 57.4
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 6.6e-214 748.0 701 58.9
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 6.6e-214 748.0 735 53.6
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 8.6e-214 747.7 722 56.4
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 7.3e-213 744.6 723 57.7
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 7.3e-213 744.6 738 53.8
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 7.3e-213 744.6 727 56.9
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 7.3e-213 744.6 633 60.2
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 1.2e-212 743.8 735 54.0
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 1.6e-212 743.4 732 53.6
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 2.1e-212 743.0 729 53.5
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 3.4e-210 735.7 724 54.8
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 7.5e-210 734.6 733 54.8
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 5.4e-208 728.4 722 54.4
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 1.3e-206 723.8 729 53.4
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 6.6e-206 721.5 729 53.4
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 2.1e-204 716.5 726 52.5
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 3.6e-204 715.7 727 52.8
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 3.1e-203 712.6 762 52.8
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 5.2e-203 711.8 727 52.5
Actinidia40373 Actinidia chinensis HOM05D006559 ORTHO05D008867 6.8e-203 711.4 485 74.4
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 1.9e-200 703.4 745 51.4
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 1.0e-198 697.6 715 54.7
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 3.3e-197 692.6 721 52.7
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 1.6e-196 690.3 722 53.6
Nitab4.5_0000169g0190 Nicotiana tabacum HOM05D006559 ORTHO05D008867 9.9e-194 681.0 511 67.3
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 1.2e-186 657.5 710 53.4
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 1.7e-185 653.7 708 52.4
Hma1.2p1_0078F.1_g039960 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.5e-181 640.6 523 64.1
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 1.3e-180 637.5 726 50.1
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 2.4e-168 596.7 723 48.3
ClCG00G004240 Citrullus lanatus HOM05D006559 ORTHO05D008867 4.2e-168 595.9 505 63.6
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 3.4e-162 576.2 713 47.7
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 4.1e-155 552.7 715 45.9
CARHR092280 Cardamine hirsuta HOM05D006559 ORTHO05D008867 1.7e-140 504.2 400 63.8
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 5.3e-139 499.2 703 43.4
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 2.6e-133 480.3 704 42.6
RcHm_v2.0_Chr4g0424931 Rosa chinensis HOM05D006559 ORTHO05D008867 3.5e-114 416.8 399 57.9
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 1.7e-108 397.9 658 38.3
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 2.8e-103 380.6 615 38.0
TAR365G1053 Trochodendron aralioides HOM05D006559 ORTHO05D008867 9.5e-96 355.5 247 72.1
SMO116G0303 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 5.2e-78 296.6 465 38.1
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 4.4e-69 266.9 477 38.2
SMO239G0200 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 6.4e-68 263.1 543 33.5
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.9e-35 155.2 298 33.9
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.2e-35 153.3 284 36.6
Actinidia27128 Actinidia chinensis HOM05D006559 ORTHO05D008867 1.6e-34 152.1 98 73.5
SMO195G0016 Selaginella moellendorffii HOM05D006559 ORTHO05D008867 6.7e-33 146.7 375 29.9
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 8.2e-31 139.8 246 37.0
Cc03_g00880 Coffea canephora HOM05D006559 ORTHO05D008867 8.2e-31 139.8 87 73.6
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.3e-28 132.5 169 46.2
MBI14_g17950_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D241410 3.9e-25 120.9 157 46.5
RcHm_v2.0_Chr4g0425061 Rosa chinensis HOM05D006559 ORTHO05D008867 1.1e-22 112.8 113 57.5
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 6.7e-17 93.6 81 58.0
BcaB04g20870 Brassica carinata HOM05D006559 ORTHO05D019951 2.6e-16 91.7 87 56.3
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 3.3e-16 91.3 121 46.3
RcHm_v2.0_Chr4g0425071 Rosa chinensis HOM05D006559 ORTHO05D343184 1.4e-14 85.9 79 57.0
BcaC01g05501 Brassica carinata HOM05D006559 ORTHO05D019951 2.6e-13 81.6 89 53.9
Potri.008G105850 Populus trichocarpa HOM05D006559 ORTHO05D050582 6.5e-12 77.0 70 54.3
RcHm_v2.0_Chr3g0458131 Rosa chinensis HOM05D006559 ORTHO05D050582 1.1e-11 76.3 74 55.4


User provided reference genes

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