Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 6.2e-126 454.1 230 100.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 6.3e-62 241.5 229 65.1
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 6.3e-62 241.5 229 65.1
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.5e-60 235.7 230 65.2
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 4.5e-60 235.3 230 63.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.3e-59 233.8 229 63.3
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.3e-59 233.8 229 63.3
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.7e-59 233.4 229 62.9
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 2.3e-59 233.0 229 62.9
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.3e-59 233.0 229 62.9
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.9e-59 232.6 229 62.9
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.9e-59 232.6 229 62.9
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.9e-59 232.6 229 62.9
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 3.9e-59 232.3 229 62.9
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.9e-59 232.3 229 62.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.4
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.0
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.0
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.0
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.9
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 5.0e-59 231.9 229 62.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 6.6e-59 231.5 229 62.4
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.6e-59 231.5 229 62.9
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 6.6e-59 231.5 229 62.4
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 6.6e-59 231.5 229 62.4
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 6.6e-59 231.5 229 62.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 8.6e-59 231.1 229 62.4
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 8.6e-59 231.1 229 62.0
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 8.6e-59 231.1 229 62.0
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 8.6e-59 231.1 229 62.0
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 8.6e-59 231.1 229 62.4
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 1.1e-58 230.7 229 62.0
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.1e-58 230.7 229 62.4
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.5e-58 230.3 229 62.0
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.9e-58 229.9 229 61.1
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.9e-58 229.9 229 62.0
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.9e-58 229.9 229 62.0
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.9e-58 229.9 229 62.0
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 2.5e-58 229.6 229 61.6
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 2.5e-58 229.6 234 59.8
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 3.3e-58 229.2 229 61.6
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.6e-58 228.4 229 61.6
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 5.6e-58 228.4 229 62.4
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 5.6e-58 228.4 229 62.0
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 5.6e-58 228.4 229 61.1
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 5.6e-58 228.4 229 61.6
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 9.5e-58 227.6 229 61.1
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 9.5e-58 227.6 229 61.6
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.6e-57 226.9 229 61.1
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.6e-57 226.9 227 61.7
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.6e-57 226.9 227 61.7
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.6e-57 226.9 227 61.7
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.6e-57 226.9 229 61.1
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.6e-57 226.9 229 61.1
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.1e-57 226.5 229 61.1
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.1e-57 226.5 229 62.0
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 2.1e-57 226.5 229 60.7
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.1e-57 226.5 230 60.9
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 2.1e-57 226.5 229 59.8
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 2.8e-57 226.1 229 60.3
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 4.7e-57 225.3 229 60.7
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 6.1e-57 224.9 229 60.7
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 6.1e-57 224.9 229 60.7
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 6.1e-57 224.9 229 60.7
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 6.1e-57 224.9 229 60.7
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 6.1e-57 224.9 229 60.3
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 8.0e-57 224.6 228 59.6
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 8.0e-57 224.6 229 60.7
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 8.0e-57 224.6 229 60.7
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 1.0e-56 224.2 229 60.7
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.0e-56 224.2 229 60.3
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.3e-56 223.0 229 60.3
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 3.4e-55 219.2 229 58.5
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 3.4e-55 219.2 229 59.0
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.3e-54 217.2 229 60.3
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.7e-54 216.9 228 58.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 8.3e-54 214.5 229 57.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.9e-53 213.4 229 59.4
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 4.1e-53 212.2 227 56.4
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 1.7e-51 206.8 227 55.5
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 3.9e-51 205.7 221 57.9
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 3.9e-51 205.7 216 59.3
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 6.6e-51 204.9 216 58.8
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 6.6e-51 204.9 185 67.6
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.2e-49 200.7 168 70.2
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.6e-49 200.3 211 59.7
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.6e-49 199.1 167 70.1
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.6e-49 199.1 167 70.1
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 1.8e-48 196.8 210 59.0
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 2.3e-48 196.4 302 47.4
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 5.2e-48 195.3 181 64.1
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 6.8e-48 194.9 181 64.1
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 8.9e-48 194.5 223 55.2
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 2.0e-47 193.4 181 63.5
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 9.8e-47 191.0 229 50.2
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 1.3e-46 190.7 190 60.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.2e-46 189.9 178 64.0
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 4.1e-45 185.7 184 60.9
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 6.6e-43 178.3 229 52.4
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 1.5e-42 177.2 229 52.0
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 1.1e-40 171.0 250 51.2
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.6e-39 166.4 229 49.8
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 6.4e-38 161.8 229 48.5
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.4e-37 159.8 228 47.4
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 9.2e-37 157.9 155 61.3
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 2.8e-33 146.4 138 63.0
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 4.0e-32 142.5 227 41.4
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.6e-31 139.8 129 65.1
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 9.6e-26 121.3 115 62.6
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.6e-25 120.6 115 62.6
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 2.8e-25 119.8 181 45.9
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 5.8e-23 112.1 66 87.9
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.9e-22 109.8 224 36.6
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 5.1e-19 99.0 113 54.0
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.3e-18 95.1 229 34.5
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 1.4e-13 80.9 95 53.7
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.4e-13 80.1 95 53.7
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.3e-09 67.8 107 45.8


User provided reference genes

Program Settings