Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11623 Corylus avellana HOM05D002808 ORTHO05D044790 1.7e-111 406.0 199 100.0
Cfa014940 Carpinus fangiana HOM05D002808 ORTHO05D003135 7.9e-77 290.8 239 66.9
Potri.001G317001 Populus trichocarpa HOM05D002808 ORTHO05D003135 3.7e-18 95.9 108 49.1
Sabra16G0200400 Salix brachista HOM05D002808 ORTHO05D044790 2.0e-16 90.1 196 36.7
Manes.03G146300 Manihot esculenta HOM05D002808 ORTHO05D003135 2.3e-15 86.7 102 46.1
CiPaw.09G054500 Carya illinoinensis HOM05D002808 ORTHO05D003135 3.9e-15 85.9 120 42.5
TWI38G0056 Tripterygium wilfordii HOM05D002808 ORTHO05D003135 5.0e-15 85.5 100 46.0
Potri.004G038400 Populus trichocarpa HOM05D002808 ORTHO05D003135 6.6e-15 85.1 121 37.2
Potri.011G047100 Populus trichocarpa HOM05D002808 ORTHO05D003135 3.3e-14 82.8 95 46.3
TAR627G0014 Trochodendron aralioides HOM05D002808 ORTHO05D003135 4.3e-14 82.4 99 42.4
Sabra11G0032700 Salix brachista HOM05D002808 ORTHO05D003135 7.3e-14 81.6 135 34.8
TAR626G1282 Trochodendron aralioides HOM05D002808 ORTHO05D003135 1.6e-13 80.5 124 41.1
GSVIVG01007118001 Vitis vinifera HOM05D002808 ORTHO05D003135 2.1e-13 80.1 106 40.6
PSO675G4664 Papaver somniferum HOM05D002808 ORTHO05D003135 3.6e-13 79.3 95 45.3
Sabra04G0023500 Salix brachista HOM05D002808 ORTHO05D003135 3.6e-13 79.3 110 38.2
PSO541G4209 Papaver somniferum HOM05D002808 ORTHO05D003135 4.7e-13 79.0 95 45.3
QL05p038939 Quercus lobata HOM05D002808 ORTHO05D003135 6.2e-13 78.6 107 41.1
ClCG03G005720 Citrullus lanatus HOM05D002808 ORTHO05D003135 8.0e-13 78.2 94 42.6
Manes.17G042200 Manihot esculenta HOM05D002808 ORTHO05D003135 8.0e-13 78.2 99 38.4
TAR626G1215 Trochodendron aralioides HOM05D002808 ORTHO05D003135 8.0e-13 78.2 124 40.3
Dinv07522 Davidia involucrata HOM05D002808 ORTHO05D003135 1.1e-12 77.8 100 43.0
Sed0028146 Sechium edule HOM05D002808 ORTHO05D003135 1.1e-12 77.8 103 39.8
CiPaw.03G174400 Carya illinoinensis HOM05D002808 ORTHO05D003135 1.4e-12 77.4 162 33.3
Phvul.006G188600 Phaseolus vulgaris HOM05D002808 ORTHO05D003135 1.8e-12 77.0 105 41.0
CsaV3_1G011990 Cucumis sativus L. HOM05D002808 ORTHO05D003135 2.3e-12 76.6 94 42.6
Haze_06527 Corylus avellana HOM05D002808 ORTHO05D003135 5.2e-12 75.5 122 36.9
Ca_18516_v3 Cicer arietinum L. HOM05D002808 ORTHO05D003135 1.2e-11 74.3 99 39.4
Glyma.13G183300 Glycine max HOM05D002808 ORTHO05D003135 1.5e-11 73.9 105 41.9
Lalb_Chr05g0218311 Lupinus albus HOM05D002808 ORTHO05D003135 2.0e-11 73.6 102 34.3
Lalb_Chr09g0327531 Lupinus albus HOM05D002808 ORTHO05D003135 2.6e-11 73.2 105 36.2
Nn2g14250 Nelumbo nucifera HOM05D002808 ORTHO05D003135 3.4e-11 72.8 94 39.4
PGR004G0378 Punica granatum HOM05D002808 ORTHO05D003135 3.4e-11 72.8 99 39.4
GSVIVG01030542001 Vitis vinifera HOM05D002808 ORTHO05D003135 3.4e-11 72.8 95 44.2
VMungo0540G0036 Vigna mungo HOM05D002808 ORTHO05D003135 4.4e-11 72.4 99 39.4
Glyma.07G193100 Glycine max HOM05D002808 ORTHO05D003135 9.8e-11 71.2 107 38.3
Aqoxy1G02592 Aquilegia oxysepala HOM05D002808 ORTHO05D003135 1.7e-10 70.5 94 40.4
MELO3C002575.2 Cucumis melo HOM05D002808 ORTHO05D003135 1.7e-10 70.5 103 38.8
Lj6g0001777 Lotus japonicus HOM05D002808 ORTHO05D003135 1.7e-10 70.5 103 36.9
MD05G1320900 Malus domestica HOM05D002808 ORTHO05D003135 1.7e-10 70.5 105 38.1
Medtr2g013000 Medicago truncatula HOM05D002808 ORTHO05D003135 2.9e-10 69.7 109 37.6
CANSAT64G0853 Cannabis sativa HOM05D002808 ORTHO05D003135 3.7e-10 69.3 97 39.2
Rhsim04G0067100 Rhododendron simsii HOM05D002808 ORTHO05D003135 3.7e-10 69.3 100 37.0
COL.COLO4_22781 Corchorus olitorius HOM05D002808 ORTHO05D003135 4.9e-10 68.9 104 38.5
Oeu038236.1 Olea europaea HOM05D002808 ORTHO05D003135 6.4e-10 68.6 103 34.0
Thecc.06G193100 Theobroma cacao HOM05D002808 ORTHO05D003135 6.4e-10 68.6 102 35.3
Ca_00303_v3 Cicer arietinum L. HOM05D002808 ORTHO05D003135 8.3e-10 68.2 145 31.7
Manes.13G148600 Manihot esculenta HOM05D002808 ORTHO05D003135 8.3e-10 68.2 100 36.0
Nn1g06645 Nelumbo nucifera HOM05D002808 ORTHO05D003135 1.1e-09 67.8 96 36.5
Cc02_g12840 Coffea canephora HOM05D002808 ORTHO05D003135 1.4e-09 67.4 103 35.9
Cc09_g10780 Coffea canephora HOM05D002808 ORTHO05D003135 1.4e-09 67.4 103 35.9
VMungo0251G2678 Vigna mungo HOM05D002808 ORTHO05D003135 1.4e-09 67.4 99 38.4
Glyma.13G242700 Glycine max HOM05D002808 ORTHO05D003135 1.9e-09 67.0 100 41.0
Duzib235G0556 Durio zibethinus HOM05D002808 ORTHO05D003135 3.2e-09 66.2 104 36.5
Nn2g12560 Nelumbo nucifera HOM05D002808 ORTHO05D003135 7.0e-09 65.1 121 31.4
Phvul.002G225500 Phaseolus vulgaris HOM05D002808 ORTHO05D003135 7.0e-09 65.1 99 36.4
RhsimUnG0043100 Rhododendron simsii HOM05D002808 ORTHO05D003135 7.0e-09 65.1 119 31.9
TPR.G36820 Trifolium pratense HOM05D002808 ORTHO05D003135 7.0e-09 65.1 146 33.6
Gorai.011G025400 Gossypium raimondii HOM05D002808 ORTHO05D003135 9.2e-09 64.7 151 29.8
Dinv40529 Davidia involucrata HOM05D002808 ORTHO05D003135 1.2e-08 64.3 77 41.6
DCAR_028116 Daucus carota HOM05D002808 ORTHO05D003135 3.5e-08 62.8 174 24.7
MD05G1320400 Malus domestica HOM05D002808 ORTHO05D003135 3.5e-08 62.8 105 35.2
Cfa014582 Carpinus fangiana HOM05D002808 ORTHO05D003135 4.6e-08 62.4 97 37.1
Duzib192G0379 Durio zibethinus HOM05D002808 ORTHO05D003135 6.0e-08 62.0 102 37.3
Lj4g0010618 Lotus japonicus HOM05D002808 ORTHO05D003135 6.0e-08 62.0 104 34.6
QL08p038142 Quercus lobata HOM05D002808 ORTHO05D003135 6.0e-08 62.0 96 35.4
arahy.Tifrunner.gnm1.ann1.29L0YD Arachis hypogaea HOM05D002808 ORTHO05D003135 7.8e-08 61.6 204 27.5
Cpa.g.sc530.4 Carica papaya HOM05D002808 ORTHO05D003135 7.8e-08 61.6 121 33.1
Ciclev10017687m.g Citrus clementina HOM05D002808 ORTHO05D003135 7.8e-08 61.6 94 38.3
Psat1g206480 Pisum sativum HOM05D002808 ORTHO05D003135 7.8e-08 61.6 149 31.5
arahy.Tifrunner.gnm1.ann1.KT8XA7 Arachis hypogaea HOM05D002808 ORTHO05D003135 1.3e-07 60.8 204 27.5
Sp1g09760 Schrenkiella parvula HOM05D002808 ORTHO05D003135 3.9e-07 59.3 106 34.0
Atru.chr10.1958 Acer truncatum HOM05D002808 ORTHO05D003135 6.6e-07 58.5 97 41.2
Dinv12909 Davidia involucrata HOM05D000973 ORTHO05D000652 8.6e-07 58.2 70 40.0
MSTRG.7317 Avicennia marina HOM05D002808 ORTHO05D003135 1.5e-06 57.4 179 28.5
Carub.0002s0411 Capsella rubella HOM05D002808 ORTHO05D003135 1.5e-06 57.4 121 32.2
Cc03_g09780 Coffea canephora HOM05D002808 ORTHO05D003135 1.5e-06 57.4 74 41.9
PGR042G1039 Punica granatum HOM05D002808 ORTHO05D003135 1.5e-06 57.4 99 35.4
MD05G1320700 Malus domestica HOM05D002808 ORTHO05D003135 2.5e-06 56.6 68 42.6
AL1G22050 Arabidopsis lyrata HOM05D002808 ORTHO05D003135 3.3e-06 56.2 87 39.1
BcaC07g41790 Brassica carinata HOM05D002808 ORTHO05D003135 4.3e-06 55.8 102 32.4
MD10G1299500 Malus domestica HOM05D002808 ORTHO05D003135 4.3e-06 55.8 75 41.3
AL2G15350 Arabidopsis lyrata HOM05D002808 ORTHO05D003135 7.3e-06 55.1 105 33.3
AT1G61080 Arabidopsis thaliana HOM05D002808 ORTHO05D003135 7.3e-06 55.1 106 34.9
BcaB04g20313 Brassica carinata HOM05D002808 ORTHO05D003135 9.5e-06 54.7 99 32.3
Medtr4g089110 Medicago truncatula HOM05D002808 ORTHO05D003135 9.5e-06 54.7 99 32.3


User provided reference genes

Program Settings