Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 8.0e-114 413.7 196 100.0
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 2.3e-76 289.3 137 97.8
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 6.2e-74 281.2 141 90.8
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 8.0e-74 280.8 138 92.0
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.4e-73 280.0 138 91.3
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 1.8e-73 279.6 139 91.4
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 5.2e-73 278.1 138 89.1
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 1.5e-72 276.6 138 89.1
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 2.0e-72 276.2 138 90.6
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 2.0e-72 276.2 138 89.1
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 2.6e-72 275.8 138 90.6
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 3.4e-72 275.4 138 89.1
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 4.4e-72 275.0 136 90.4
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 4.4e-72 275.0 138 89.1
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 5.8e-72 274.6 139 88.5
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 5.8e-72 274.6 137 89.8
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 7.5e-72 274.2 138 89.9
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 9.8e-72 273.9 139 89.2
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.3e-71 273.5 138 89.9
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 1.3e-71 273.5 139 87.1
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 3.7e-71 271.9 137 88.3
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 3.7e-71 271.9 137 88.3
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 3.7e-71 271.9 138 88.4
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 4.9e-71 271.6 138 87.0
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 6.4e-71 271.2 138 88.4
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 8.3e-71 270.8 137 89.1
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.1e-70 270.4 138 87.7
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.1e-70 270.4 137 89.1
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.4e-70 270.0 138 85.5
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 2.4e-70 269.2 139 85.6
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 4.1e-70 268.5 138 86.2
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 7.0e-70 267.7 139 84.9
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 7.0e-70 267.7 137 88.3
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 9.2e-70 267.3 138 87.0
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 9.2e-70 267.3 139 84.9
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 9.2e-70 267.3 139 87.8
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 1.2e-69 266.9 138 87.0
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 1.2e-69 266.9 138 86.2
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 2.1e-69 266.2 136 88.2
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 2.1e-69 266.2 141 83.7
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 2.7e-69 265.8 139 84.2
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.5e-69 265.4 137 85.4
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 4.6e-69 265.0 138 86.2
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 4.6e-69 265.0 139 85.6
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 4.6e-69 265.0 139 83.5
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 4.6e-69 265.0 139 84.2
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 6.0e-69 264.6 139 84.2
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 6.0e-69 264.6 138 87.0
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 6.0e-69 264.6 139 85.6
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 6.0e-69 264.6 139 86.3
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 1.0e-68 263.8 138 85.5
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 1.3e-68 263.5 139 82.7
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.3e-68 263.5 139 82.0
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 1.3e-68 263.5 138 84.1
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 1.3e-68 263.5 139 83.5
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 1.7e-68 263.1 139 84.9
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 3.0e-68 262.3 139 85.6
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 5.0e-68 261.5 139 85.6
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 6.6e-68 261.2 139 83.5
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 6.6e-68 261.2 139 84.2
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 6.6e-68 261.2 139 82.7
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.6e-68 261.2 139 84.2
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 6.6e-68 261.2 137 82.5
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 6.6e-68 261.2 136 83.8
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 8.6e-68 260.8 136 84.6
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 8.6e-68 260.8 138 84.8
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 8.6e-68 260.8 139 84.9
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 1.5e-67 260.0 138 82.6
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 1.5e-67 260.0 138 82.6
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.9e-67 259.6 134 86.6
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 2.5e-67 259.2 139 82.0
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 2.5e-67 259.2 139 81.3
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 2.5e-67 259.2 137 85.4
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.5e-67 259.2 134 85.8
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 2.5e-67 259.2 137 83.9
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 3.3e-67 258.8 139 81.3
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.3e-67 258.8 137 86.1
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 4.3e-67 258.5 139 83.5
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 4.3e-67 258.5 139 83.5
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 5.6e-67 258.1 139 82.7
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 7.3e-67 257.7 142 81.0
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 7.3e-67 257.7 138 81.9
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 7.3e-67 257.7 137 86.1
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 9.5e-67 257.3 139 83.5
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.2e-66 256.9 139 81.3
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 1.2e-66 256.9 137 81.0
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 1.2e-66 256.9 140 83.6
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 2.1e-66 256.1 139 80.6
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.6e-66 255.4 139 79.9
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 4.7e-66 255.0 139 80.6
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 4.7e-66 255.0 131 84.0
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 6.2e-66 254.6 130 86.9
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 1.1e-65 253.8 137 84.7
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.1e-65 253.8 137 80.3
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 1.1e-65 253.8 139 79.1
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 1.4e-65 253.4 136 83.1
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 1.4e-65 253.4 138 82.6
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.8e-65 253.1 133 83.5
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 2.3e-65 252.7 137 83.9
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 2.3e-65 252.7 137 83.9
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 2.3e-65 252.7 137 83.9
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 2.3e-65 252.7 137 83.9
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.3e-65 252.7 137 83.9
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.1e-65 252.3 137 81.8
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 4.0e-65 251.9 139 81.3
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 6.8e-65 251.1 137 81.8
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 6.8e-65 251.1 137 81.8
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 6.8e-65 251.1 139 80.6
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 8.9e-65 250.8 137 79.6
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 8.9e-65 250.8 137 81.8
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 1.2e-64 250.4 134 80.6
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.0e-64 249.6 139 78.4
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 3.4e-64 248.8 137 82.5
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 3.4e-64 248.8 137 82.5
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 7.5e-64 247.7 138 77.5
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 7.5e-64 247.7 137 81.8
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 7.5e-64 247.7 145 77.9
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 9.9e-64 247.3 137 81.8
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 1.7e-63 246.5 136 80.9
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 1.7e-63 246.5 141 78.0
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 3.7e-63 245.4 129 83.7
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 1.4e-62 243.4 134 78.4
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.2e-61 240.4 136 78.7
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 4.6e-61 238.4 140 77.1
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 4.6e-61 238.4 136 75.7
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 6.6e-60 234.6 130 77.7
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 5.4e-54 214.9 136 69.1
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 5.4e-54 214.9 123 76.4
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 7.8e-53 211.1 122 74.6
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 9.6e-51 204.1 136 66.9
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 4.7e-50 201.8 138 64.5
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 4.9e-47 191.8 135 63.0
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 4.3e-43 178.7 130 63.8
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 9.9e-40 167.5 135 53.3
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.5e-35 153.7 135 47.4
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 3.4e-32 142.5 139 48.2
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 9.9e-32 141.0 135 45.2
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 4.6e-29 132.1 71 83.1
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 3.3e-27 125.9 87 65.5
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 3.6e-13 79.3 61 59.0
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 1.0e-12 77.8 44 75.0
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.1e-11 74.3 88 47.7


User provided reference genes

Program Settings