Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11576 Corylus avellana HOM05D009286 ORTHO05D011130 1.7e-72 275.8 130 100.0
Cfa014890 Carpinus fangiana HOM05D009286 ORTHO05D011130 7.2e-71 270.4 130 98.5
QL06p023574 Quercus lobata HOM05D009286 ORTHO05D011130 1.3e-35 153.3 84 86.9
CiPaw.02G067700 Carya illinoinensis HOM05D009286 ORTHO05D011130 3.3e-31 138.7 86 77.9
CiPaw.01G125200 Carya illinoinensis HOM05D009286 ORTHO05D011130 1.6e-30 136.3 130 60.0
Manes.15G051025 Manihot esculenta HOM05D009286 ORTHO05D011130 1.6e-30 136.3 88 75.0
Duzib151G0679 Durio zibethinus HOM05D009286 ORTHO05D011130 5.8e-28 127.9 97 72.2
Manes.03G149800 Manihot esculenta HOM05D009286 ORTHO05D011130 2.2e-27 125.9 88 70.5
Duzib268G0949 Durio zibethinus HOM05D009286 ORTHO05D011130 1.4e-26 123.2 98 74.5
Thecc.04G210000 Theobroma cacao HOM05D009286 ORTHO05D011130 1.4e-26 123.2 93 73.1
Duzib268G0451 Durio zibethinus HOM05D009286 ORTHO05D011130 1.2e-25 120.2 98 73.5
Gohir.D02G031400 Gossypium hirsutum HOM05D009286 ORTHO05D011130 1.2e-25 120.2 85 74.1
Gorai.005G034900 Gossypium raimondii HOM05D009286 ORTHO05D011130 1.2e-25 120.2 85 74.1
Gohir.A02G024000 Gossypium hirsutum HOM05D009286 ORTHO05D011130 3.0e-24 115.5 85 71.8
Gohir.D09G196800 Gossypium hirsutum HOM05D009286 ORTHO05D011130 6.6e-24 114.4 82 70.7
Gorai.006G220200 Gossypium raimondii HOM05D009286 ORTHO05D011130 6.6e-24 114.4 82 70.7
Actinidia39956 Actinidia chinensis HOM05D000290 ORTHO05D006586 5.6e-23 111.3 106 56.6
Gohir.A09G202700 Gossypium hirsutum HOM05D009286 ORTHO05D011130 5.6e-23 111.3 91 65.9
COL.COLO4_20307 Corchorus olitorius HOM05D009286 ORTHO05D011130 1.4e-21 106.7 90 68.9
Potri.003G177200 Populus trichocarpa HOM05D009286 ORTHO05D011130 1.4e-21 106.7 95 63.2
Sabra03G0129800 Salix brachista HOM05D009286 ORTHO05D011130 1.5e-20 103.2 95 60.0
Sed0020601 Sechium edule HOM05D009286 ORTHO05D011130 3.4e-20 102.1 85 61.2
Potri.001G051300 Populus trichocarpa HOM05D009286 ORTHO05D011130 2.2e-19 99.4 94 66.0
MBI07_g22395_MAGBIO Magnolia biondii HOM05D009286 ORTHO05D011130 6.4e-19 97.8 86 59.3
Atru.chr4.1762 Acer truncatum HOM05D009286 ORTHO05D011130 1.1e-18 97.1 67 71.6
TAR633G2369 Trochodendron aralioides HOM05D009286 ORTHO05D011130 2.1e-17 92.8 62 74.2
ATR0787G204 Amborella trichopoda HOM05D009286 ORTHO05D011130 2.5e-15 85.9 67 62.7
Ciclev10006054m.g Citrus clementina HOM05D009286 ORTHO05D011130 2.1e-14 82.8 75 64.0
Cpa.g.sc59.104 Carica papaya HOM05D009286 ORTHO05D011130 1.8e-13 79.7 79 60.8
Oeu063490.1 Olea europaea HOM05D009286 ORTHO05D011130 7.6e-12 74.3 82 59.8
Sp1g03610 Schrenkiella parvula HOM05D008913 ORTHO05D011130 9.9e-12 73.9 69 65.2
CARHR004160 Cardamine hirsuta HOM05D008913 ORTHO05D011130 1.1e-10 70.5 80 57.5
CSS0021418 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006586 1.9e-10 69.7 57 57.9
Migut.G00633 Erythranthe guttata HOM05D009286 ORTHO05D011130 4.2e-10 68.6 93 48.4
Rhsim02G0053900 Rhododendron simsii HOM05D009286 ORTHO05D011130 7.1e-10 67.8 52 63.5
AL1G14490 Arabidopsis lyrata HOM05D009286 ORTHO05D011130 8.7e-08 60.8 48 68.8
A10p03200 Brassica napus HOM05D008913 ORTHO05D011130 2.5e-07 59.3 44 70.5
C05p02950 Brassica napus HOM05D008913 ORTHO05D011130 3.3e-07 58.9 67 53.7
BolC5t29076H Brassica oleracea HOM05D008913 ORTHO05D011130 3.3e-07 58.9 67 53.7
BraA10t42594Z Brassica rapa HOM05D008913 ORTHO05D011317 1.6e-06 56.6 40 72.5
SalBow2G0875 Salvia bowleyana HOM05D009286 ORTHO05D011130 1.6e-06 56.6 73 47.9
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 3.6e-06 55.5 79 43.0
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 3.6e-06 55.5 79 43.0
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 3.6e-06 55.5 79 43.0


User provided reference genes

Program Settings