Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 2.3e-171 605.5 319 100.0
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 7.6e-106 387.9 319 63.6
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 4.8e-92 342.0 258 67.4
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 3.1e-91 339.3 253 66.8
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.1e-83 314.3 251 61.4
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.1e-83 312.4 254 59.4
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.5e-82 310.5 251 60.6
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 5.9e-82 308.5 255 58.8
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.2e-80 302.8 258 58.9
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.0e-78 296.2 253 58.9
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 5.1e-78 295.4 251 58.6
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.1e-77 294.3 249 58.2
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.5e-77 293.1 253 57.3
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.3e-77 292.4 253 57.3
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 9.7e-77 291.2 250 58.4
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 2.4e-75 286.6 126 98.4
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.1e-75 286.2 253 56.1
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 3.2e-72 276.2 255 54.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.1e-71 273.5 258 55.8
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.7e-71 273.1 251 55.8
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 7.9e-71 271.6 251 53.0
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 5.1e-70 268.9 264 52.7
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.1e-69 267.7 252 53.2
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 2.6e-69 266.5 252 53.2
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 4.4e-69 265.8 249 55.0
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.8e-68 263.1 257 51.8
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.8e-68 263.1 254 52.4
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.8e-67 260.4 250 50.0
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 9.1e-67 258.1 254 52.4
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 2.0e-66 256.9 248 52.8
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 2.6e-66 256.5 248 52.4
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 4.5e-66 255.8 248 50.4
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.9e-66 255.4 265 50.2
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 8.5e-65 251.5 248 51.6
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.9e-64 250.4 250 50.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.1e-63 246.9 242 49.2
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.7e-63 246.5 250 49.6
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.5e-61 240.7 256 49.6
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.8e-60 236.5 256 48.8
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 2.8e-60 236.5 250 46.8
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.8e-59 233.8 132 75.0
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 5.3e-59 232.3 242 49.2
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 7.0e-59 231.9 248 48.4
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.1e-56 224.6 137 69.3
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.7e-55 219.9 128 68.8
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.7e-55 219.9 242 46.7
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 3.6e-55 219.5 261 42.9
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 8.0e-55 218.4 141 66.7
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.4e-54 217.6 124 69.4
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.5e-53 214.2 244 46.7
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 7.5e-53 211.8 123 73.2
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 5.4e-51 205.7 113 77.0
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 7.0e-51 205.3 131 65.6
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 2.7e-50 203.4 251 43.8
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 4.5e-50 202.6 127 64.6
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 7.2e-48 195.3 110 74.5
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.2e-47 194.5 118 72.9
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 8.0e-47 191.8 103 74.8
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 1.2e-45 188.0 254 40.6
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 4.1e-43 179.5 206 46.6
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.3e-41 174.5 259 37.1
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 7.3e-40 168.7 183 50.3
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 2.1e-39 167.2 192 45.3
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.1e-39 167.2 122 60.7
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 3.6e-39 166.4 98 68.4
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 8.9e-38 161.8 86 80.2
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.2e-37 161.4 256 36.7
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 7.5e-37 158.7 98 66.3
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 9.8e-37 158.3 166 51.8
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 7.0e-35 152.1 106 57.5
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.6e-31 141.0 143 48.3
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.9e-28 129.4 239 31.8
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 2.3e-25 120.6 73 67.1
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.2e-23 114.8 234 30.8
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.1e-22 110.2 242 30.2
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 9.2e-19 98.6 93 49.5
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.7e-18 97.1 236 29.7
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 7.8e-18 95.5 148 43.2
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.0e-17 95.1 224 28.1
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 6.2e-15 85.9 145 37.2
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 3.4e-13 80.1 54 70.4
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 4.4e-13 79.7 59 69.5
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 7.6e-13 79.0 170 31.2
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 1.4e-11 74.7 47 78.7
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.4e-11 73.9 50 74.0
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 9.2e-11 72.0 169 30.2
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 2.1e-10 70.9 50 72.0
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.7e-09 67.8 48 72.9
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.7e-09 67.8 50 64.0
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 3.9e-09 66.6 60 58.3
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 8.6e-09 65.5 48 60.4
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.6e-07 61.2 50 56.0


User provided reference genes

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