Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 3.1e-146 521.9 292 100.0
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 2.6e-44 183.3 114 86.8
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 2.7e-41 173.3 266 44.7
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 3.5e-41 172.9 265 42.6
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 6.0e-41 172.2 263 43.7
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 7.8e-41 171.8 261 42.9
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 3.0e-40 169.9 268 42.5
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 5.1e-40 169.1 265 41.9
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 8.7e-40 168.3 263 42.6
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 8.7e-40 168.3 261 43.3
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 8.7e-40 168.3 261 43.3
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.1e-39 167.9 268 42.5
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 1.5e-39 167.5 267 41.6
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 1.9e-39 167.2 266 41.4
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 1.9e-39 167.2 266 42.5
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 1.9e-39 167.2 264 42.0
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 2.5e-39 166.8 263 42.6
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 4.3e-39 166.0 264 42.0
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 4.3e-39 166.0 264 42.0
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 4.3e-39 166.0 264 42.4
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 5.6e-39 165.6 267 40.8
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 7.3e-39 165.2 264 42.0
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 7.3e-39 165.2 265 42.6
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 9.6e-39 164.9 264 42.4
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 1.6e-38 164.1 261 41.4
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 1.6e-38 164.1 267 40.4
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 2.1e-38 163.7 262 41.6
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 2.1e-38 163.7 263 41.8
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 6.2e-38 162.2 265 41.1
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 8.1e-38 161.8 262 40.8
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 8.1e-38 161.8 261 41.8
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.1e-37 161.4 262 40.8
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 1.4e-37 161.0 264 40.2
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 1.8e-37 160.6 262 40.8
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 1.8e-37 160.6 265 41.1
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 1.8e-37 160.6 257 42.4
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 2.4e-37 160.2 263 40.3
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 2.4e-37 160.2 263 39.2
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 4.0e-37 159.5 254 42.5
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 6.9e-37 158.7 266 40.6
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.2e-36 157.9 266 40.2
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 1.5e-36 157.5 267 39.3
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 2.0e-36 157.1 263 41.4
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 2.6e-36 156.8 262 39.7
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 2.6e-36 156.8 265 41.5
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.6e-36 156.8 263 39.5
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 4.5e-36 156.0 257 41.2
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 7.6e-36 155.2 248 41.1
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.3e-35 154.5 266 40.6
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 1.3e-35 154.5 253 41.5
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 2.2e-35 153.7 260 39.6
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 2.2e-35 153.7 254 41.3
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.2e-35 153.7 259 39.8
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 2.2e-35 153.7 268 38.4
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 3.8e-35 152.9 266 40.6
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 6.4e-35 152.1 261 37.9
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 6.4e-35 152.1 262 39.3
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 6.4e-35 152.1 261 39.1
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 6.4e-35 152.1 259 39.8
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 6.4e-35 152.1 259 39.8
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 6.4e-35 152.1 259 40.2
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 8.4e-35 151.8 255 40.4
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 1.1e-34 151.4 261 38.3
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 1.1e-34 151.4 258 39.9
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 3.2e-34 149.8 253 40.3
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 3.2e-34 149.8 263 38.8
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 4.2e-34 149.4 254 40.6
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 4.2e-34 149.4 260 39.6
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 4.2e-34 149.4 261 38.3
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 5.4e-34 149.1 253 40.7
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 5.4e-34 149.1 261 37.9
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 7.1e-34 148.7 261 41.0
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 7.1e-34 148.7 261 41.0
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 1.6e-33 147.5 261 38.3
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 4.6e-33 146.0 261 40.2
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 6.0e-33 145.6 254 39.8
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 1.0e-32 144.8 255 38.4
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 1.8e-32 144.1 257 39.7
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 2.3e-32 143.7 261 39.5
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 2.3e-32 143.7 261 39.5
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 3.0e-32 143.3 256 39.5
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 3.0e-32 143.3 256 39.5
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 3.0e-32 143.3 261 39.5
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 6.7e-32 142.1 261 39.1
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 6.7e-32 142.1 250 38.8
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 8.7e-32 141.7 261 38.7
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 1.1e-31 141.4 261 38.7
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 1.9e-31 140.6 261 39.1
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 4.3e-31 139.4 255 36.5
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 5.6e-31 139.0 253 38.3
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 7.4e-31 138.7 251 38.2
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 9.6e-31 138.3 98 68.4
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 1.3e-30 137.9 256 39.5
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 2.1e-30 137.1 251 37.1
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.8e-29 134.0 242 39.3
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 4.0e-29 132.9 253 36.4
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 5.3e-29 132.5 259 36.3
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.5e-28 131.0 92 72.8
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 2.6e-28 130.2 86 76.7
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 8.4e-27 125.2 91 73.6
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 5.5e-26 122.5 242 36.4
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 2.1e-25 120.6 263 33.8
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 1.1e-23 114.8 92 60.9
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 1.2e-20 104.8 259 30.9
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.2e-19 100.5 90 57.8
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 4.9e-19 99.4 94 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.2e-17 94.7 95 50.5
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 2.8e-14 83.6 196 32.7
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 3.7e-14 83.2 86 48.8
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 8.2e-14 82.0 196 32.1
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 9.0e-13 78.6 116 41.4
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 3.4e-12 76.6 100 46.0
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 1.3e-11 74.7 85 44.7
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 7.2e-10 68.9 86 51.2
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.1e-07 61.6 37 70.3


User provided reference genes

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