Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11316 Corylus avellana HOM05D003860 ORTHO05D004218 1.6e-227 792.3 383 100.0
Haze_11318 Corylus avellana HOM05D003860 ORTHO05D004218 4.9e-168 594.7 429 75.5
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 1.4e-58 231.1 292 46.2
GSVIVG01017372001 Vitis vinifera HOM05D003860 ORTHO05D004218 4.2e-58 229.6 277 45.8
GSVIVG01018132001 Vitis vinifera HOM05D003860 ORTHO05D004218 4.6e-57 226.1 281 45.2
TAR365G0731 Trochodendron aralioides HOM05D003860 ORTHO05D004218 2.3e-56 223.8 256 48.4
Dinv29898 Davidia involucrata HOM05D003860 ORTHO05D004218 2.8e-54 216.9 257 47.9
Lj3C795G8 Lonicera japonica HOM05D003860 ORTHO05D004218 1.1e-53 214.9 257 45.1
TWI09G0161 Tripterygium wilfordii HOM05D003860 ORTHO05D004218 5.8e-52 209.1 261 43.3
Gohir.D04G018000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 3.8e-51 206.5 253 44.3
Gorai.012G021000 Gossypium raimondii HOM05D003860 ORTHO05D004218 3.8e-51 206.5 253 44.3
Actinidia05456 Actinidia chinensis HOM05D003860 ORTHO05D004218 8.4e-51 205.3 263 44.1
Nn1g02668 Nelumbo nucifera HOM05D003860 ORTHO05D004218 1.4e-50 204.5 286 40.9
Gohir.A05G398000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 1.2e-49 201.4 253 43.5
Prupe.1G033500 Prunus persica HOM05D003860 ORTHO05D004218 3.5e-49 199.9 258 44.2
Thecc.04G247900 Theobroma cacao HOM05D003860 ORTHO05D004218 3.5e-49 199.9 255 43.5
MBI01_g26745_MAGBIO Magnolia biondii HOM05D003860 ORTHO05D004218 5.1e-48 196.1 272 41.9
Duzib114G0251 Durio zibethinus HOM05D003860 ORTHO05D004218 1.1e-47 194.9 294 39.8
MD16G1211400 Malus domestica HOM05D003860 ORTHO05D004218 1.1e-47 194.9 270 40.7
vmacro08440 Vaccinium macrocarpon HOM05D003860 ORTHO05D004218 5.6e-47 192.6 260 42.7
Potri.008G163500 Populus trichocarpa HOM05D003860 ORTHO05D004218 1.3e-46 191.4 256 41.0
CSS0040755 Camellia sinensis var. sinensis HOM05D003860 ORTHO05D004218 1.6e-46 191.0 257 43.2
Aqoxy2G03595 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 6.2e-46 189.1 254 40.9
EL10Ac3g05899 Beta vulgaris HOM05D003860 ORTHO05D004218 6.2e-46 189.1 280 38.2
Sabra08G0124700 Salix brachista HOM05D003860 ORTHO05D004218 6.2e-46 189.1 258 41.1
Atru.chr4.2181 Acer truncatum HOM05D003860 ORTHO05D004218 8.1e-46 188.7 256 42.2
MELO3C026783.2 Cucumis melo HOM05D003860 ORTHO05D004218 3.1e-45 186.8 259 41.7
Sc19g0003450 Simmondsia chinensis HOM05D003860 ORTHO05D004218 4.0e-45 186.4 255 41.2
Glyma.12G000500 Glycine max HOM05D003860 ORTHO05D004218 6.9e-45 185.7 260 38.5
MSTRG.9921 Avicennia marina HOM05D003860 ORTHO05D004218 9.0e-45 185.3 261 41.0
RcHm_v2.0_Chr5g0051721 Rosa chinensis HOM05D003860 ORTHO05D004218 1.5e-44 184.5 261 41.4
Hund04555 Selenicereus undatus HOM05D003860 ORTHO05D004218 4.5e-44 183.0 258 38.8
Phvul.002G055200 Phaseolus vulgaris HOM05D003860 ORTHO05D004218 9.9e-44 181.8 260 39.2
Eucgr.H03148 Eucalyptus grandis HOM05D003860 ORTHO05D004218 1.3e-43 181.4 266 41.0
Lalb_Chr03g0043921 Lupinus albus HOM05D003860 ORTHO05D004218 1.3e-43 181.4 257 39.7
CiPaw.02G115700 Carya illinoinensis HOM05D003860 ORTHO05D004218 1.7e-43 181.0 263 40.7
Psat7g227280 Pisum sativum HOM05D003860 ORTHO05D004218 4.9e-43 179.5 258 39.5
SalBow6G3557 Salvia bowleyana HOM05D003860 ORTHO05D004218 8.4e-43 178.7 261 38.7
Lj3g0013538 Lotus japonicus HOM05D003860 ORTHO05D004218 1.4e-42 177.9 260 40.4
RcHm_v2.0_Chr7g0211841 Rosa chinensis HOM05D003860 ORTHO05D004218 2.4e-42 177.2 261 40.2
FAN25G1720 Fragaria x ananassa HOM05D003860 ORTHO05D004218 3.2e-42 176.8 260 40.4
PSO210G3069 Papaver somniferum HOM05D003860 ORTHO05D004218 3.2e-42 176.8 261 38.7
PSO832G4205 Papaver somniferum HOM05D003860 ORTHO05D004218 2.7e-41 173.7 261 37.9
CDE02G3490 Ceratophyllum demersum HOM05D003860 ORTHO05D004218 3.5e-41 173.3 264 37.5
Cc03_g05000 Coffea canephora HOM05D003860 ORTHO05D004218 7.9e-41 172.2 265 37.4
CANSAT78G0297 Cannabis sativa HOM05D003860 ORTHO05D004218 2.3e-40 170.6 256 40.2
FvH4_3g28990 Fragaria vesca HOM05D003860 ORTHO05D004218 2.3e-40 170.6 260 39.2
FAN21G0272 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.3e-40 170.6 260 40.4
Rhsim04G0189100 Rhododendron simsii HOM05D003860 ORTHO05D004218 2.3e-40 170.6 260 38.5
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea HOM05D003860 ORTHO05D004218 3.0e-40 170.2 259 37.1
RcHm_v2.0_Chr4g0391121 Rosa chinensis HOM05D003860 ORTHO05D004218 3.0e-40 170.2 261 39.1
Sed0002683 Sechium edule HOM05D003860 ORTHO05D004218 3.9e-40 169.9 259 39.4
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea HOM05D003860 ORTHO05D004218 5.1e-40 169.5 259 36.7
SalBow2G1275 Salvia bowleyana HOM05D003860 ORTHO05D004218 5.1e-40 169.5 264 37.9
Medtr4g032190 Medicago truncatula HOM05D003860 ORTHO05D004218 6.7e-40 169.1 258 37.2
FAN11G1859 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.1e-39 168.3 260 38.8
AUR62015467 Chenopodium quinoa HOM05D003860 ORTHO05D004218 1.5e-39 167.9 257 36.6
PGR004G1248 Punica granatum HOM05D003860 ORTHO05D004218 4.3e-39 166.4 261 37.2
Peaxi162Scf00204g00115 Petunia axillaris HOM05D003860 ORTHO05D004218 5.6e-39 166.0 255 38.8
DCAR_027287 Daucus carota HOM05D003860 ORTHO05D004218 9.6e-39 165.2 258 38.4
TPR.G34114 Trifolium pratense HOM05D003860 ORTHO05D004218 2.1e-38 164.1 257 36.2
Rhsim02G0034600 Rhododendron simsii HOM05D003860 ORTHO05D004218 2.8e-38 163.7 260 39.6
Nitab4.5_0000436g0080 Nicotiana tabacum HOM05D003860 ORTHO05D004218 3.7e-38 163.3 255 36.1
COL.COLO4_20681 Corchorus olitorius HOM05D003860 ORTHO05D004218 4.8e-38 162.9 137 54.7
Lsat_1_v5_gn_5_71460 Lactuca sativa HOM05D003860 ORTHO05D004218 4.8e-38 162.9 273 35.9
Manes.03G168100 Manihot esculenta HOM05D003860 ORTHO05D004218 8.1e-38 162.2 136 58.1
PSO386G0262 Papaver somniferum HOM05D003860 ORTHO05D004218 1.4e-37 161.4 260 37.3
PSO724G0870 Papaver somniferum HOM05D003860 ORTHO05D004218 1.4e-37 161.4 260 37.3
Sopen03g001470 Solanum pennellii HOM05D003860 ORTHO05D004218 1.8e-37 161.0 255 36.5
Oeu008802.1 Olea europaea HOM05D003860 ORTHO05D004218 3.1e-37 160.2 259 37.1
PGSC0003DMG400013397 Solanum tuberosum HOM05D003860 ORTHO05D004218 3.1e-37 160.2 255 36.9
Nitab4.5_0003331g0100 Nicotiana tabacum HOM05D003860 ORTHO05D004218 4.0e-37 159.8 259 35.5
PSO675G5794 Papaver somniferum HOM05D003860 ORTHO05D004218 9.0e-37 158.7 271 38.4
Ca_19732_v3 Cicer arietinum L. HOM05D003860 ORTHO05D004218 2.0e-36 157.5 153 51.6
Solyc03g005440.3 Solanum lycopersicum HOM05D003860 ORTHO05D004218 2.0e-36 157.5 255 36.5
CAN.G638.70 Capsicum annuum HOM05D003860 ORTHO05D004218 4.5e-36 156.4 256 35.2
SalBow2G2538 Salvia bowleyana HOM05D003860 ORTHO05D004218 4.5e-36 156.4 260 38.1
Solyc09g089570.4 Solanum lycopersicum HOM05D003860 ORTHO05D004218 7.6e-36 155.6 252 34.9
Sopen09g032490 Solanum pennellii HOM05D003860 ORTHO05D004218 1.7e-35 154.5 252 34.5
Peaxi162Scf00019g03122 Petunia axillaris HOM05D003860 ORTHO05D004218 2.9e-35 153.7 255 36.9
Lsat_1_v5_gn_5_72601 Lactuca sativa HOM05D003860 ORTHO05D004218 1.1e-34 151.8 255 36.1
Ciclev10005898m.g Citrus clementina HOM05D003860 ORTHO05D004218 1.4e-34 151.4 270 35.9
HPP92_016098 Vanilla planifolia HOM05D003860 ORTHO05D004218 1.9e-34 151.0 260 35.8
Ah.07g207450 Amaranthus hybridus HOM05D003860 ORTHO05D004218 2.5e-34 150.6 254 31.9
THA.LOC104798705 Tarenaya hassleriana HOM05D003860 ORTHO05D004218 2.5e-34 150.6 260 33.5
PSO170G3926 Papaver somniferum HOM05D003860 ORTHO05D004218 4.2e-34 149.8 261 34.9
Lsat_1_v5_gn_5_72621 Lactuca sativa HOM05D003860 ORTHO05D004218 5.5e-34 149.4 257 35.0
CARHR265010 Cardamine hirsuta HOM05D003860 ORTHO05D004218 1.6e-33 147.9 255 33.7
Nitab4.5_0009720g0020 Nicotiana tabacum HOM05D003860 ORTHO05D004218 2.7e-33 147.1 259 35.5
SHI00610 Sapria himalayana HOM05D003860 ORTHO05D004218 5.1e-32 142.9 126 52.4
Hund11859 Selenicereus undatus HOM05D003860 ORTHO05D004218 6.7e-32 142.5 170 41.8
PSO063G5549 Papaver somniferum HOM05D003860 ORTHO05D004218 1.1e-31 141.7 258 32.6
PSO724G0326 Papaver somniferum HOM05D003860 ORTHO05D004218 2.5e-31 140.6 256 34.4
ClCG06G006760 Citrullus lanatus HOM05D003860 ORTHO05D004218 3.3e-31 140.2 106 60.4
ECA233G4435 Erigeron canadensis HOM05D003860 ORTHO05D004218 7.4e-31 139.0 253 32.4
PSO386G0027 Papaver somniferum HOM05D003860 ORTHO05D004218 7.4e-31 139.0 251 33.9
Aa31LG3G8460 Aethionema arabicum HOM05D003860 ORTHO05D004218 1.6e-30 137.9 252 34.1
HanXRQChr12g0378901 Helianthus annuus HOM05D003860 ORTHO05D004218 1.1e-29 135.2 259 34.4
Thhalv10014347m.g Eutrema salsugineum HOM05D003860 ORTHO05D004218 3.1e-29 133.7 254 29.9
SpUn0060_0020 Schrenkiella parvula HOM05D003860 ORTHO05D004218 4.5e-28 129.8 253 32.8
Sp2g07130 Schrenkiella parvula HOM05D003860 ORTHO05D004218 7.6e-28 129.0 254 33.1
PGSC0003DMG400005308 Solanum tuberosum HOM05D003860 ORTHO05D004218 7.6e-28 129.0 109 52.3
AL8G26450 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 1.0e-27 128.6 256 31.2
Lsat_1_v5_gn_7_62061 Lactuca sativa HOM05D003860 ORTHO05D004218 1.3e-27 128.3 125 49.6
BcaB01g04181 Brassica carinata HOM05D003860 ORTHO05D004218 1.7e-27 127.9 252 31.7
CARHR156760 Cardamine hirsuta HOM05D003860 ORTHO05D004218 2.2e-27 127.5 255 32.5
PGSC0003DMG400017259 Solanum tuberosum HOM05D003860 ORTHO05D004218 2.2e-27 127.5 257 31.1
BcaC01g06158 Brassica carinata HOM05D003860 ORTHO05D004218 2.9e-27 127.1 252 30.6
HanXRQChr12g0386161 Helianthus annuus HOM05D003860 ORTHO05D004218 2.9e-27 127.1 260 33.8
Zm00001eb108590 Zea mays HOM05D003860 ORTHO05D004218 2.9e-27 127.1 258 30.6
BraA03t10876Z Brassica rapa HOM05D003860 ORTHO05D004218 5.0e-27 126.3 252 30.2
Peaxi162Scf00024g00515 Petunia axillaris HOM05D003860 ORTHO05D004218 1.4e-26 124.8 254 34.6
AT5G42670 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 3.2e-26 123.6 254 32.7
Os05g0140600 Oryza sativa ssp. japonica HOM05D003860 ORTHO05D004218 5.5e-26 122.9 147 40.8
Peaxi162Scf01247g00111 Petunia axillaris HOM05D003860 ORTHO05D004218 3.6e-25 120.2 114 51.8
C03p18580 Brassica napus HOM05D003860 ORTHO05D004218 4.6e-25 119.8 149 38.9
BolC3t14252H Brassica oleracea HOM05D003860 ORTHO05D004218 4.6e-25 119.8 149 38.9
BcaB01g04182 Brassica carinata HOM05D003860 ORTHO05D004218 6.1e-25 119.4 253 30.4
Carub.0008s0633 Capsella rubella HOM05D003860 ORTHO05D004218 1.0e-24 118.6 251 30.3
Carub.0008s1217 Capsella rubella HOM05D003860 ORTHO05D004218 1.0e-24 118.6 258 29.5
A03p15860 Brassica napus HOM05D003860 ORTHO05D004218 2.3e-24 117.5 149 38.3
SEGI_04428 Sequoiadendron giganteum HOM05D003860 ORTHO05D004218 3.0e-24 117.1 129 43.4
AL8G18530 Arabidopsis lyrata HOM05D003860 ORTHO05D004218 5.1e-24 116.3 255 30.2
unitig_32.g10833 Utricularia gibba HOM05D003860 ORTHO05D004218 6.7e-24 115.9 257 30.4
BcaB07g31066 Brassica carinata HOM05D003860 ORTHO05D004218 1.1e-23 115.2 254 31.9
BcaB07g31067 Brassica carinata HOM05D003860 ORTHO05D004218 1.1e-23 115.2 254 31.9
HanXRQChr16g0514681 Helianthus annuus HOM05D003860 ORTHO05D004218 1.5e-23 114.8 141 42.6
C02p19970 Brassica napus HOM05D003860 ORTHO05D004218 1.9e-23 114.4 253 29.2
BolC2t08132H Brassica oleracea HOM05D003860 ORTHO05D004218 1.9e-23 114.4 253 29.2
BolC9t55408H Brassica oleracea HOM05D003860 ORTHO05D004218 1.9e-23 114.4 265 31.3
Mapoly0001s0415 Marchantia polymorpha HOM05D003860 ORTHO05D004218 4.3e-23 113.2 252 29.4
AT5G52070 Arabidopsis thaliana HOM05D003860 ORTHO05D004218 7.4e-23 112.5 107 51.4
BcaC01g06162 Brassica carinata HOM05D003860 ORTHO05D004218 7.4e-23 112.5 148 39.2
A02p11970 Brassica napus HOM05D003860 ORTHO05D004218 1.3e-22 111.7 256 28.9
Lsat_1_v5_gn_2_69300 Lactuca sativa HOM05D003860 ORTHO05D004218 1.6e-22 111.3 124 46.0
BcaC04g21988 Brassica carinata HOM05D003860 ORTHO05D004218 3.7e-22 110.2 266 31.6
C09p25140 Brassica napus HOM05D003860 ORTHO05D004218 3.7e-22 110.2 266 31.6
BraA02t06261Z Brassica rapa HOM05D003860 ORTHO05D004218 4.8e-22 109.8 253 28.5
Sp6g14330 Schrenkiella parvula HOM05D003860 ORTHO05D004218 1.1e-21 108.6 121 46.3
SalBow5G0294 Salvia bowleyana HOM05D003860 ORTHO05D004218 1.4e-21 108.2 90 54.4
ATR0665G258 Amborella trichopoda HOM05D003860 ORTHO05D004218 3.1e-21 107.1 88 54.5
A09p19840 Brassica napus HOM05D003860 ORTHO05D004218 6.9e-21 105.9 256 29.7
BraA09t37590Z Brassica rapa HOM05D003860 ORTHO05D004218 2.0e-20 104.4 256 29.7
BcaC06g31848 Brassica carinata HOM05D003860 ORTHO05D004218 3.4e-20 103.6 252 29.8
SGA_v2.0_scaffold101G29803 Striga asiatica HOM05D003860 ORTHO05D004218 7.7e-20 102.4 261 30.7
AUR62002255 Chenopodium quinoa HOM05D003860 ORTHO05D004218 1.0e-19 102.1 253 30.0
Zm00001eb417650 Zea mays HOM05D003860 ORTHO05D004218 3.6e-17 93.6 79 49.4
BcaC03g14550 Brassica carinata HOM05D003860 ORTHO05D004218 5.1e-16 89.7 73 54.8
CARHR181580 Cardamine hirsuta HOM05D003860 ORTHO05D004218 6.3e-14 82.8 135 37.8
SMO358G0545 Selaginella moellendorffii HOM05D003860 ORTHO05D004218 1.1e-13 82.0 145 33.8
Pp3c1_19590 Physcomitrium patens HOM05D003860 ORTHO05D004218 1.8e-13 81.3 265 24.2
HPP92_016073 Vanilla planifolia HOM05D003860 ORTHO05D004218 4.1e-13 80.1 65 53.8
Cpa.g.sc126.47 Carica papaya HOM05D003860 ORTHO05D004218 5.9e-12 76.3 49 67.3
AagrBONN_evm.TU.Sc2ySwM_117.2824 Anthoceros agrestis HOM05D003860 ORTHO05D004218 1.7e-11 74.7 136 28.7
CBR_g50140 Chara braunii HOM05D003860 ORTHO05D004218 3.8e-11 73.6 220 26.8
VMungo0251G0597 Vigna mungo HOM05D003860 ORTHO05D004218 4.2e-10 70.1 39 76.9
Cpa.g.sc126.46 Carica papaya HOM05D003860 ORTHO05D004218 1.0e-08 65.5 46 63.0
PSO386G0085 Papaver somniferum HOM05D003860 ORTHO05D004218 1.8e-08 64.7 60 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1422 Anthoceros agrestis HOM05D003860 ORTHO05D004218 2.6e-07 60.8 139 29.5
C03p18530 Brassica napus HOM05D003860 ORTHO05D004218 1.7e-06 58.2 104 30.8
BolC3t14250H Brassica oleracea HOM05D003860 ORTHO05D004218 1.7e-06 58.2 104 30.8
FAN11G2919 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.7e-06 58.2 59 47.5
PSO724G0039 Papaver somniferum HOM05D003860 ORTHO05D004218 8.2e-06 55.8 45 53.3


User provided reference genes

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