Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11283 Corylus avellana HOM05D000615 ORTHO05D000447 1.7e-70 269.2 141 100.0
Cfa008388 Carpinus fangiana HOM05D000615 ORTHO05D000447 3.2e-24 115.5 80 75.0
Cfa008387 Carpinus fangiana HOM05D000615 ORTHO05D000447 2.4e-19 99.4 88 63.6
QL06p015434 Quercus lobata HOM05D000615 ORTHO05D000447 2.1e-15 86.3 79 55.7
Haze_11282 Corylus avellana HOM05D000615 ORTHO05D000447 6.1e-15 84.7 100 50.0
CiPaw.01G191000 Carya illinoinensis HOM05D000615 ORTHO05D000447 3.9e-14 82.0 67 61.2
QL06p015499 Quercus lobata HOM05D000615 ORTHO05D000447 1.1e-13 80.5 76 56.6
QL06p015544 Quercus lobata HOM05D000615 ORTHO05D000447 1.1e-13 80.5 76 56.6
QL06p015469 Quercus lobata HOM05D000615 ORTHO05D000447 1.5e-13 80.1 105 44.8
Cfa008386 Carpinus fangiana HOM05D000615 ORTHO05D000447 7.4e-13 77.8 139 36.0
QL06p015361 Quercus lobata HOM05D000615 ORTHO05D000447 2.2e-12 76.3 89 48.3
QL06p015507 Quercus lobata HOM05D000615 ORTHO05D000447 6.3e-12 74.7 105 43.8
QL06p015565 Quercus lobata HOM05D000615 ORTHO05D000447 6.3e-12 74.7 105 43.8
CiPaw.01G191800 Carya illinoinensis HOM05D000615 ORTHO05D000447 8.2e-12 74.3 64 59.4
CiPaw.01G191400 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.1e-11 73.9 64 59.4
CiPaw.01G191200 Carya illinoinensis HOM05D000615 ORTHO05D000447 3.1e-11 72.4 64 56.2
CiPaw.01G191300 Carya illinoinensis HOM05D000615 ORTHO05D000447 3.1e-11 72.4 64 56.2
CiPaw.01G190900 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.6e-10 69.3 68 57.4
QL03p030631 Quercus lobata HOM05D000615 ORTHO05D000447 2.6e-10 69.3 101 42.6
Medtr1g075230 Medicago truncatula HOM05D000615 ORTHO05D000447 3.5e-10 68.9 88 45.5
CiPaw.01G191700 Carya illinoinensis HOM05D000615 ORTHO05D000447 5.9e-10 68.2 64 54.7
QL03p031135 Quercus lobata HOM05D000615 ORTHO05D000447 7.7e-10 67.8 69 52.2
Prupe.1G028800 Prunus persica HOM05D000615 ORTHO05D000447 1.7e-09 66.6 85 48.2
RcHm_v2.0_Chr4g0389751 Rosa chinensis HOM05D000615 ORTHO05D000447 2.2e-09 66.2 103 39.8
MD16G1207500 Malus domestica HOM05D000615 ORTHO05D000447 2.9e-09 65.9 66 56.1
MD16G1207600 Malus domestica HOM05D000615 ORTHO05D000447 2.9e-09 65.9 66 56.1
RcHm_v2.0_Chr4g0389791 Rosa chinensis HOM05D000615 ORTHO05D000447 2.9e-09 65.9 103 39.8
arahy.Tifrunner.gnm1.ann1.N9PH3H Arachis hypogaea HOM05D000615 ORTHO05D000447 3.8e-09 65.5 109 36.7
Prupe.1G028500 Prunus persica HOM05D000615 ORTHO05D000447 3.8e-09 65.5 103 41.7
RcHm_v2.0_Chr4g0389771 Rosa chinensis HOM05D000615 ORTHO05D000447 3.8e-09 65.5 103 38.8
FvH4_4g02480 Fragaria vesca HOM05D000615 ORTHO05D000447 5.0e-09 65.1 59 62.7
FAN12G4284 Fragaria x ananassa HOM05D000615 ORTHO05D000447 5.0e-09 65.1 59 62.7
FAN17G0093 Fragaria x ananassa HOM05D000615 ORTHO05D000447 5.0e-09 65.1 59 62.7
Glyma.10G185800 Glycine max HOM05D000615 ORTHO05D000447 5.0e-09 65.1 84 46.4
Lj5g0015603 Lotus japonicus HOM05D000615 ORTHO05D000447 5.0e-09 65.1 83 47.0
QL03p030679 Quercus lobata HOM05D000615 ORTHO05D000447 6.5e-09 64.7 69 49.3
Medtr1g074990 Medicago truncatula HOM05D000615 ORTHO05D000447 8.5e-09 64.3 133 30.8
Glyma.20G204400 Glycine max HOM05D000615 ORTHO05D000447 1.1e-08 63.9 84 45.2
Phvul.L001759 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 1.1e-08 63.9 83 44.6
RcHm_v2.0_Chr4g0389901 Rosa chinensis HOM05D000615 ORTHO05D000447 1.1e-08 63.9 59 61.0
Medtr1g075030 Medicago truncatula HOM05D000615 ORTHO05D000447 1.5e-08 63.5 153 30.7
Medtr1g075095 Medicago truncatula HOM05D000615 ORTHO05D000447 1.5e-08 63.5 153 30.7
CANSAT78G0132 Cannabis sativa HOM05D000615 ORTHO05D000447 2.5e-08 62.8 67 53.7
VMungo0720G1150 Vigna mungo HOM05D000615 ORTHO05D000447 2.5e-08 62.8 83 42.2
arahy.Tifrunner.gnm1.ann1.D1TD5B Arachis hypogaea HOM05D000615 ORTHO05D000447 3.2e-08 62.4 129 36.4
arahy.Tifrunner.gnm1.ann1.GVM1TH Arachis hypogaea HOM05D000615 ORTHO05D000447 3.2e-08 62.4 129 37.2
Psat6g128360 Pisum sativum HOM05D000615 ORTHO05D000447 3.2e-08 62.4 66 48.5
Prupe.1G029000 Prunus persica HOM05D000615 ORTHO05D000447 3.2e-08 62.4 66 54.5
CiPaw.01G191900 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.2e-08 62.0 141 33.3
arahy.Tifrunner.gnm1.ann1.4D3FVT Arachis hypogaea HOM05D000615 ORTHO05D000447 5.5e-08 61.6 129 37.2
CANSAT21G1809 Cannabis sativa HOM05D000615 ORTHO05D000447 7.2e-08 61.2 67 53.7
Prupe.1G029100 Prunus persica HOM05D000615 ORTHO05D000447 9.4e-08 60.8 61 54.1
Haze_11285 Corylus avellana HOM05D000615 ORTHO05D000447 1.6e-07 60.1 52 57.7
FAN17G1035 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.1e-07 59.7 76 42.1
FvH4_4g02370 Fragaria vesca HOM05D000615 ORTHO05D000447 2.7e-07 59.3 103 35.0
FvH4_4g02430 Fragaria vesca HOM05D000615 ORTHO05D000447 2.7e-07 59.3 103 35.0
FAN22G2002 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.7e-07 59.3 103 35.0
QL05p007135 Quercus lobata HOM05D000615 ORTHO05D000447 2.7e-07 59.3 65 43.1
arahy.Tifrunner.gnm1.ann1.7FGL0C Arachis hypogaea HOM05D000615 ORTHO05D000447 4.7e-07 58.5 59 55.9
arahy.Tifrunner.gnm1.ann1.YILV44 Arachis hypogaea HOM05D000615 ORTHO05D000447 4.7e-07 58.5 59 55.9
CANSAT78G1350 Cannabis sativa HOM05D000615 ORTHO05D000447 4.7e-07 58.5 67 50.7
FvH4_4g02460 Fragaria vesca HOM05D000615 ORTHO05D000447 8.0e-07 57.8 66 48.5
FAN12G2024 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.0e-06 57.4 66 48.5
FAN17G2191 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.8e-06 56.6 66 47.0
Prupe.1G028400 Prunus persica HOM05D000615 ORTHO05D000447 1.8e-06 56.6 66 48.5
Haze_08398 Corylus avellana HOM05D000480 ORTHO05D000313 2.3e-06 56.2 54 51.9
RcHm_v2.0_Chr4g0412411 Rosa chinensis HOM05D000615 ORTHO05D000447 2.3e-06 56.2 68 47.1
CANSAT78G1655 Cannabis sativa HOM05D000615 ORTHO05D000447 3.0e-06 55.8 59 54.2
Cfa004436 Carpinus fangiana HOM05D000615 ORTHO05D000447 3.0e-06 55.8 65 56.9
Medtr1g074950 Medicago truncatula HOM05D000615 ORTHO05D000447 3.0e-06 55.8 59 54.2
Glyma.20G204500 Glycine max HOM05D000615 ORTHO05D000447 4.0e-06 55.5 59 52.5
TPR.G28506 Trifolium pratense HOM05D000615 ORTHO05D000447 8.8e-06 54.3 54 53.7


User provided reference genes

Program Settings