Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11209 Corylus avellana HOM05D002650 ORTHO05D013293 6.0e-112 407.5 207 100.0
Haze_01688 Corylus avellana HOM05D029806 ORTHO05D013293 5.8e-14 82.0 158 42.4
Haze_23857 Corylus avellana HOM05D011710 ORTHO05D013293 4.9e-13 79.0 89 50.6
Haze_11208 Corylus avellana HOM05D002650 ORTHO05D002924 1.1e-12 77.8 111 44.1
Cfa008466 Carpinus fangiana HOM05D002650 ORTHO05D002924 1.3e-10 70.9 77 51.9
CiPaw.01G197800 Carya illinoinensis HOM05D002650 ORTHO05D002924 2.3e-10 70.1 77 50.6
QL06p001588 Quercus lobata HOM05D002650 ORTHO05D002924 2.3e-10 70.1 77 51.9
Nitab4.5_0000085g0370 Nicotiana tabacum HOM05D002650 ORTHO05D002924 6.6e-10 68.6 77 49.4
CAN.G1476.5 Capsicum annuum HOM05D002650 ORTHO05D002924 3.3e-09 66.2 77 48.1
Sopen09g031260 Solanum pennellii HOM05D002650 ORTHO05D002924 3.3e-09 66.2 77 46.8
vmacro15359 Vaccinium macrocarpon HOM05D002650 ORTHO05D002924 3.3e-09 66.2 78 47.4
ClCG05G005000 Citrullus lanatus HOM05D002650 ORTHO05D002924 4.3e-09 65.9 77 48.1
Eucgr.B01054 Eucalyptus grandis HOM05D002650 ORTHO05D002924 5.6e-09 65.5 77 45.5
FAN17G0389 Fragaria x ananassa HOM05D002650 ORTHO05D002924 5.6e-09 65.5 78 46.2
MD13G1197200 Malus domestica HOM05D002650 ORTHO05D002924 9.6e-09 64.7 77 48.1
TAR362G0085 Trochodendron aralioides HOM05D002650 ORTHO05D002924 9.6e-09 64.7 77 48.1
FAN22G1889 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.2e-08 64.3 78 44.9
MD16G1197400 Malus domestica HOM05D002650 ORTHO05D002924 1.2e-08 64.3 77 48.1
Haze_18375 Corylus avellana HOM05D029806 ORTHO05D013293 1.6e-08 63.9 78 48.7
Sed0009300 Sechium edule HOM05D002650 ORTHO05D002924 1.6e-08 63.9 84 44.0
Peaxi162Scf00092g00119 Petunia axillaris HOM05D002650 ORTHO05D002924 2.1e-08 63.5 77 48.1
TWI09G0495 Tripterygium wilfordii HOM05D002650 ORTHO05D002924 2.1e-08 63.5 77 48.1
HanXRQChr17g0564431 Helianthus annuus HOM05D002650 ORTHO05D002924 2.8e-08 63.2 98 38.8
Oeu010308.1 Olea europaea HOM05D002650 ORTHO05D002924 2.8e-08 63.2 75 48.0
Rhsim02G0027100 Rhododendron simsii HOM05D002650 ORTHO05D002924 2.8e-08 63.2 77 46.8
CANSAT78G1249 Cannabis sativa HOM05D002650 ORTHO05D002924 4.7e-08 62.4 77 44.2
DCAR_024182 Daucus carota HOM05D002650 ORTHO05D002924 4.7e-08 62.4 84 45.2
ECA234G0728 Erigeron canadensis HOM05D002650 ORTHO05D002924 4.7e-08 62.4 98 38.8
Nn1g02387 Nelumbo nucifera HOM05D002650 ORTHO05D002924 4.7e-08 62.4 77 46.8
RcHm_v2.0_Chr1g0322251 Rosa chinensis HOM05D002650 ORTHO05D002924 4.7e-08 62.4 77 44.2
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 4.7e-08 62.4 77 45.5
Actinidia08479 Actinidia chinensis HOM05D002650 ORTHO05D002924 6.2e-08 62.0 77 45.5
CsaV3_3G013050 Cucumis sativus L. HOM05D002650 ORTHO05D002924 6.2e-08 62.0 77 44.2
Duzib052G0834 Durio zibethinus HOM05D002650 ORTHO05D002924 6.2e-08 62.0 77 46.8
Hund12093 Selenicereus undatus HOM05D002650 ORTHO05D002924 6.2e-08 62.0 77 46.8
Sc13g0004600 Simmondsia chinensis HOM05D002650 ORTHO05D002924 6.2e-08 62.0 77 46.8
GSVIVG01018014001 Vitis vinifera HOM05D002650 ORTHO05D002924 6.2e-08 62.0 75 46.7
MELO3C006514.2 Cucumis melo HOM05D002650 ORTHO05D002924 8.1e-08 61.6 98 37.8
Lsat_1_v5_gn_4_29301 Lactuca sativa HOM05D002650 ORTHO05D002924 8.1e-08 61.6 98 37.8
Manes.03G175500 Manihot esculenta HOM05D002650 ORTHO05D002924 8.1e-08 61.6 77 45.5
RcHm_v2.0_Chr4g0386441 Rosa chinensis HOM05D002650 ORTHO05D002924 8.1e-08 61.6 77 44.2
Atru.chr4.2421 Acer truncatum HOM05D002650 ORTHO05D002924 1.1e-07 61.2 77 46.8
Cc03_g04080 Coffea canephora HOM05D002650 ORTHO05D002924 1.1e-07 61.2 80 45.0
Phvul.002G043200 Phaseolus vulgaris HOM05D002650 ORTHO05D002924 1.1e-07 61.2 74 47.3
TPR.G37883 Trifolium pratense HOM05D002650 ORTHO05D002924 1.1e-07 61.2 77 45.5
EL10Ac3g06476 Beta vulgaris HOM05D002650 ORTHO05D002924 1.8e-07 60.5 77 44.2
Sabra10G0058900 Salix brachista HOM05D002650 ORTHO05D002924 1.8e-07 60.5 90 40.0
Ciclev10004646m.g Citrus clementina HOM05D002650 ORTHO05D002924 2.4e-07 60.1 77 44.2
Dinv14024 Davidia involucrata HOM05D002650 ORTHO05D002924 2.4e-07 60.1 77 45.5
FAN12G3299 Fragaria x ananassa HOM05D002650 ORTHO05D002924 2.4e-07 60.1 77 42.9
Lj3A731G60 Lonicera japonica HOM05D002650 ORTHO05D002924 2.4e-07 60.1 75 45.3
Potri.010G084100 Populus trichocarpa HOM05D002650 ORTHO05D002924 2.4e-07 60.1 77 44.2
VMungo1215G1359 Vigna mungo HOM05D002650 ORTHO05D002924 2.4e-07 60.1 74 45.9
CSS0049240 Camellia sinensis var. sinensis HOM05D002650 ORTHO05D002924 4.0e-07 59.3 77 42.9
Ca_24415_v3 Cicer arietinum L. HOM05D002650 ORTHO05D002924 4.0e-07 59.3 77 45.5
COL.COLO4_21524 Corchorus olitorius HOM05D002650 ORTHO05D002924 4.0e-07 59.3 77 42.9
Glyma.01G235700 Glycine max HOM05D002650 ORTHO05D002924 4.0e-07 59.3 74 45.9
Gohir.A09G217900 Gossypium hirsutum HOM05D002650 ORTHO05D002924 5.3e-07 58.9 77 45.5
LjContig00408g0012632 Lotus japonicus HOM05D002650 ORTHO05D002924 5.3e-07 58.9 77 44.2
Os03g0746500 Oryza sativa ssp. japonica HOM05D002650 ORTHO05D002924 5.3e-07 58.9 163 30.7
Medtr5g006660 Medicago truncatula HOM05D002650 ORTHO05D002924 6.9e-07 58.5 77 42.9
Aqoxy5G00427 Aquilegia oxysepala HOM05D002650 ORTHO05D002924 1.2e-06 57.8 77 42.9
FvH4_4g00720 Fragaria vesca HOM05D002650 ORTHO05D002924 2.0e-06 57.0 158 30.4
Gohir.D09G220400 Gossypium hirsutum HOM05D002650 ORTHO05D002924 2.0e-06 57.0 77 42.9
Gorai.006G241400 Gossypium raimondii HOM05D002650 ORTHO05D002924 2.0e-06 57.0 77 42.9
AUR62034732 Chenopodium quinoa HOM05D002650 ORTHO05D002924 3.4e-06 56.2 77 42.9
Psat2g190360 Pisum sativum HOM05D002650 ORTHO05D002924 3.4e-06 56.2 77 42.9
Prupe.1G018300 Prunus persica HOM05D002650 ORTHO05D002924 3.4e-06 56.2 74 44.6
AUR62042447 Chenopodium quinoa HOM05D002650 ORTHO05D002924 4.4e-06 55.8 81 40.7
CDE04G2869 Ceratophyllum demersum HOM05D002650 ORTHO05D002924 7.6e-06 55.1 78 41.0
PSO832G4510 Papaver somniferum HOM05D002650 ORTHO05D002924 7.6e-06 55.1 85 38.8
Hma1.2p1_1572F.1_g291490 Hydrangea macrophylla HOM05D002650 ORTHO05D002924 9.9e-06 54.7 75 44.0
Lalb_Chr09g0319991 Lupinus albus HOM05D002650 ORTHO05D002924 9.9e-06 54.7 77 41.6
PSO210G7121 Papaver somniferum HOM05D002650 ORTHO05D002924 9.9e-06 54.7 98 34.7


User provided reference genes

Program Settings