Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11054 Corylus avellana HOM05D000149 ORTHO05D000076 1.0e-69 266.5 129 100.0
Cfa008564 Carpinus fangiana HOM05D000149 ORTHO05D000076 5.7e-28 127.9 122 60.7
Haze_11052 Corylus avellana HOM05D000149 ORTHO05D000076 4.1e-26 121.7 120 57.5
Haze_11051 Corylus avellana HOM05D000149 ORTHO05D000076 1.0e-24 117.1 120 56.7
Haze_07384 Corylus avellana HOM05D000149 ORTHO05D000076 1.0e-21 107.1 96 62.5
QL01p002623 Quercus lobata HOM05D000149 ORTHO05D000076 1.8e-13 79.7 112 42.9
CiPaw.05G246400 Carya illinoinensis HOM05D000149 ORTHO05D000076 5.2e-13 78.2 111 41.4
QL01p002634 Quercus lobata HOM05D000149 ORTHO05D000076 8.9e-13 77.4 114 40.4
TAR371G0782 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.6e-12 75.9 138 34.1
CiPaw.05G246500 Carya illinoinensis HOM05D000149 ORTHO05D000076 1.7e-11 73.2 112 38.4
Dinv16181 Davidia involucrata HOM05D000149 ORTHO05D000076 3.7e-11 72.0 114 37.7
Nn3g18396 Nelumbo nucifera HOM05D000149 ORTHO05D000076 6.4e-11 71.2 104 34.6
TAR371G0562 Trochodendron aralioides HOM05D000149 ORTHO05D000076 6.4e-11 71.2 115 35.7
Migut.E00399 Erythranthe guttata HOM05D000149 ORTHO05D000076 8.3e-11 70.9 123 31.7
Thecc.10G170000 Theobroma cacao HOM05D000149 ORTHO05D000076 8.3e-11 70.9 122 36.9
TAR371G0466 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.1e-10 70.5 138 31.9
TAR371G0648 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.4e-10 70.1 114 35.1
Oeu059625.1 Olea europaea HOM05D000149 ORTHO05D000076 1.9e-10 69.7 116 36.2
TWI60G0045 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.9e-10 69.7 107 42.1
Dinv14858 Davidia involucrata HOM05D000149 ORTHO05D000076 2.4e-10 69.3 95 41.1
SalBow8G5547 Salvia bowleyana HOM05D000149 ORTHO05D000076 4.1e-10 68.6 125 36.0
Dinv33975 Davidia involucrata HOM05D000149 ORTHO05D000076 5.4e-10 68.2 118 37.3
SGA_v2.0_scaffold14G06921 Striga asiatica HOM05D000149 ORTHO05D000076 5.4e-10 68.2 116 34.5
Aqoxy3G01917 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 2.0e-09 66.2 103 37.9
Nn6g34657 Nelumbo nucifera HOM05D000149 ORTHO05D000076 2.0e-09 66.2 118 35.6
Nn4g24050 Nelumbo nucifera HOM05D000149 ORTHO05D000076 4.6e-09 65.1 110 35.5
Thecc.10G169800 Theobroma cacao HOM05D000149 ORTHO05D000076 4.6e-09 65.1 115 33.9
Nn3g18397 Nelumbo nucifera HOM05D000149 ORTHO05D000076 1.0e-08 63.9 109 33.9
Thecc.02G309400 Theobroma cacao HOM05D000149 ORTHO05D000076 1.0e-08 63.9 109 36.7
TAR629G2002 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.3e-08 63.5 144 29.9
Eucgr.B02883 Eucalyptus grandis HOM05D000149 ORTHO05D000076 1.7e-08 63.2 115 35.7
Hma1.2p1_0283F.1_g113730 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 1.7e-08 63.2 121 35.5
PGR042G1424 Punica granatum HOM05D000149 ORTHO05D000076 1.7e-08 63.2 110 34.5
GSVIVG01030940001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.7e-08 63.2 101 37.6
COL.COLO4_09971 Corchorus olitorius HOM05D000149 ORTHO05D000076 2.3e-08 62.8 82 41.5
RcHm_v2.0_Chr2g0128631 Rosa chinensis HOM05D000149 ORTHO05D000076 2.3e-08 62.8 105 37.1
Nn3g18399 Nelumbo nucifera HOM05D000149 ORTHO05D000076 3.0e-08 62.4 109 33.0
QL03p037026 Quercus lobata HOM05D000149 ORTHO05D000076 3.0e-08 62.4 113 34.5
COL.COLO4_27636 Corchorus olitorius HOM05D000149 ORTHO05D000076 3.9e-08 62.0 110 36.4
Dinv10418 Davidia involucrata HOM05D000149 ORTHO05D000076 3.9e-08 62.0 101 35.6
Dinv19750 Davidia involucrata HOM05D000149 ORTHO05D000076 3.9e-08 62.0 101 35.6
Gohir.A13G027300 Gossypium hirsutum HOM05D000149 ORTHO05D000076 3.9e-08 62.0 67 46.3
THA.LOC104822559 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 3.9e-08 62.0 105 35.2
AT1G15125 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 5.0e-08 61.6 111 34.2
AT5G38100 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 5.0e-08 61.6 124 31.5
Gohir.D13G026100 Gossypium hirsutum HOM05D000149 ORTHO05D000076 5.0e-08 61.6 67 46.3
Carub.0001s1489 Capsella rubella HOM05D000149 ORTHO05D000076 6.6e-08 61.2 111 35.1
COL.COLO4_27634 Corchorus olitorius HOM05D000149 ORTHO05D000076 6.6e-08 61.2 109 35.8
Prupe.5G228500 Prunus persica HOM05D000149 ORTHO05D000076 6.6e-08 61.2 99 41.4
TAR371G0715 Trochodendron aralioides HOM05D000149 ORTHO05D000076 6.6e-08 61.2 111 33.3
COL.COLO4_27637 Corchorus olitorius HOM05D000149 ORTHO05D000076 8.6e-08 60.8 75 42.7
COL.COLO4_27639 Corchorus olitorius HOM05D000149 ORTHO05D000076 8.6e-08 60.8 96 34.4
Eucgr.B02884 Eucalyptus grandis HOM05D000149 ORTHO05D000076 8.6e-08 60.8 109 35.8
Cpa.g.sc170.3 Carica papaya HOM05D000149 ORTHO05D000076 1.1e-07 60.5 111 34.2
COL.COLO4_27638 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.1e-07 60.5 75 42.7
Dinv14856 Davidia involucrata HOM05D000149 ORTHO05D000076 1.1e-07 60.5 103 35.0
Migut.H02148 Erythranthe guttata HOM05D000149 ORTHO05D000076 1.1e-07 60.5 115 32.2
Aqoxy1G01070 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 1.9e-07 59.7 119 30.3
AT5G37990 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 1.9e-07 59.7 106 34.0
Potri.012G049900 Populus trichocarpa HOM05D000149 ORTHO05D000076 1.9e-07 59.7 108 31.5
BcaB02g08019 Brassica carinata HOM05D000149 ORTHO05D000076 2.5e-07 59.3 117 30.8
Dinv19664 Davidia involucrata HOM05D000149 ORTHO05D000076 2.5e-07 59.3 101 36.6
Duzib251G0587 Durio zibethinus HOM05D000149 ORTHO05D000076 2.5e-07 59.3 68 41.2
Gorai.013G029300 Gossypium raimondii HOM05D000149 ORTHO05D000076 2.5e-07 59.3 67 44.8
Prupe.5G228700 Prunus persica HOM05D000149 ORTHO05D000076 2.5e-07 59.3 114 34.2
TAR629G1630 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.5e-07 59.3 102 33.3
GSVIVG01030939001 Vitis vinifera HOM05D000149 ORTHO05D000076 2.5e-07 59.3 118 33.1
Prupe.5G228900 Prunus persica HOM05D000149 ORTHO05D000076 3.3e-07 58.9 107 37.4
QL03p037112 Quercus lobata HOM05D000149 ORTHO05D000076 3.3e-07 58.9 109 35.8
Hma1.2p1_1029F.1_g249570 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 4.3e-07 58.5 101 35.6
Hma1.2p1_3112F.1_g332766 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 4.3e-07 58.5 101 35.6
MD06G1227300 Malus domestica HOM05D000149 ORTHO05D000076 4.3e-07 58.5 98 34.7
QL03p037375 Quercus lobata HOM05D000149 ORTHO05D000076 4.3e-07 58.5 99 36.4
Actinidia15911 Actinidia chinensis HOM05D000149 ORTHO05D000076 5.6e-07 58.2 130 32.3
MSTRG.23604 Avicennia marina HOM05D000149 ORTHO05D000076 5.6e-07 58.2 113 32.7
Cc00_g28250 Coffea canephora HOM05D000149 ORTHO05D000076 5.6e-07 58.2 132 31.8
TAR629G1902 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.6e-07 58.2 102 32.4
AL7G52810 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 7.3e-07 57.8 117 30.8
Oeu055004.1 Olea europaea HOM05D000149 ORTHO05D000076 7.3e-07 57.8 151 28.5
TAR629G1798 Trochodendron aralioides HOM05D000149 ORTHO05D000076 7.3e-07 57.8 102 33.3
TAR629G2533 Trochodendron aralioides HOM05D000149 ORTHO05D000076 7.3e-07 57.8 102 33.3
Dinv18913 Davidia involucrata HOM05D000149 ORTHO05D000076 9.5e-07 57.4 102 34.3
Thhalv10008074m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 9.5e-07 57.4 112 32.1
MD14G1232900 Malus domestica HOM05D000149 ORTHO05D000076 9.5e-07 57.4 123 31.7
QL03p036644 Quercus lobata HOM05D000149 ORTHO05D000076 9.5e-07 57.4 99 36.4
QL03p037466 Quercus lobata HOM05D000149 ORTHO05D000076 9.5e-07 57.4 109 34.9
QL10p027354 Quercus lobata HOM05D000149 ORTHO05D000076 9.5e-07 57.4 103 34.0
Thecc.10G169600 Theobroma cacao HOM05D000149 ORTHO05D000076 9.5e-07 57.4 103 35.9
A07p19590 Brassica napus HOM05D000149 ORTHO05D000076 1.2e-06 57.0 117 30.8
BraA07t29662Z Brassica rapa HOM05D000149 ORTHO05D000076 1.2e-06 57.0 117 30.8
MD09G1254300 Malus domestica HOM05D000149 ORTHO05D000076 1.2e-06 57.0 99 34.3
Prupe.5G228400 Prunus persica HOM05D000149 ORTHO05D000076 1.2e-06 57.0 102 31.4
THA.LOC104805592 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 1.2e-06 57.0 116 30.2
A06p11130 Brassica napus HOM05D000149 ORTHO05D000076 1.6e-06 56.6 111 33.3
Dinv19753 Davidia involucrata HOM05D000149 ORTHO05D000076 1.6e-06 56.6 101 34.7
Duzib251G0572 Durio zibethinus HOM05D000149 ORTHO05D000076 1.6e-06 56.6 68 41.2
Prupe.5G228600 Prunus persica HOM05D000149 ORTHO05D000076 1.6e-06 56.6 104 36.5
TPR.G4891 Trifolium pratense HOM05D000149 ORTHO05D000076 1.6e-06 56.6 111 29.7
TWI15G0664 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.6e-06 56.6 101 36.6
TWI63G0601 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.6e-06 56.6 108 33.3
COL.COLO4_27148 Corchorus olitorius HOM05D000149 ORTHO05D019044 2.1e-06 56.2 72 41.7
MD06G1223600 Malus domestica HOM05D000149 ORTHO05D000076 2.1e-06 56.2 100 37.0
THA.LOC104822498 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 2.1e-06 56.2 71 40.8
TWI81G0278 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 2.1e-06 56.2 69 34.8
TAR629G2309 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.1e-06 56.2 109 33.0
C06p17990 Brassica napus HOM05D000149 ORTHO05D000076 2.8e-06 55.8 117 30.8
BolC6t36996H Brassica oleracea HOM05D000149 ORTHO05D000076 2.8e-06 55.8 117 30.8
CSS0006906 Camellia sinensis var. sinensis HOM05D000149 ORTHO05D000076 2.8e-06 55.8 112 33.9
COL.COLO4_27145 Corchorus olitorius HOM05D000149 ORTHO05D019044 2.8e-06 55.8 67 43.3
Oeu036131.1 Olea europaea HOM05D000149 ORTHO05D000076 2.8e-06 55.8 122 30.3
RcHm_v2.0_Chr4g0400921 Rosa chinensis HOM05D000149 ORTHO05D000076 2.8e-06 55.8 67 43.3
SGA_v2.0_scaffold38G15045 Striga asiatica HOM05D000149 ORTHO05D000076 2.8e-06 55.8 115 28.7
Aqoxy1G03729 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 3.6e-06 55.5 99 36.4
Eucgr.K02253 Eucalyptus grandis HOM05D000149 ORTHO05D000076 3.6e-06 55.5 120 33.3
Lj6A736T78 Lonicera japonica HOM05D000149 ORTHO05D000076 3.6e-06 55.5 85 37.6
Oeu035020.1 Olea europaea HOM05D000149 ORTHO05D000076 3.6e-06 55.5 148 29.1
AL7G52990 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 4.7e-06 55.1 106 32.1
BcaB02g10081 Brassica carinata HOM05D000149 ORTHO05D000076 4.7e-06 55.1 117 28.2
Cc07_g18730 Coffea canephora HOM05D000149 ORTHO05D000076 4.7e-06 55.1 116 30.2
COL.COLO4_27150 Corchorus olitorius HOM05D000149 ORTHO05D000076 4.7e-06 55.1 87 36.8
Dinv10416 Davidia involucrata HOM05D000149 ORTHO05D000076 4.7e-06 55.1 133 29.3
MD10G1005200 Malus domestica HOM05D000149 ORTHO05D000076 4.7e-06 55.1 102 35.3
Nitab4.5_0005700g0010 Nicotiana tabacum HOM05D000149 ORTHO05D000076 4.7e-06 55.1 104 30.8
RcHm_v2.0_Chr7g0178281 Rosa chinensis HOM05D000149 ORTHO05D000076 4.7e-06 55.1 107 34.6
TWI81G1096 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 4.7e-06 55.1 69 39.1
Medtr1g108660 Medicago truncatula HOM05D000149 ORTHO05D000076 6.2e-06 54.7 109 31.2
Oeu008438.1 Olea europaea HOM05D000149 ORTHO05D000076 6.2e-06 54.7 112 29.5
QL10p027335 Quercus lobata HOM05D000149 ORTHO05D000076 6.2e-06 54.7 107 31.8
THA.LOC104805597 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 6.2e-06 54.7 106 31.1
BcaC08g44356 Brassica carinata HOM05D000149 ORTHO05D000076 8.1e-06 54.3 117 29.9
Migut.I00587 Erythranthe guttata HOM05D000149 ORTHO05D000076 8.1e-06 54.3 83 38.6
Eucgr.J01532 Eucalyptus grandis HOM05D000149 ORTHO05D000076 8.1e-06 54.3 142 31.7
Eucgr.K02252 Eucalyptus grandis HOM05D000149 ORTHO05D000076 8.1e-06 54.3 120 34.2
Eucgr.L01415 Eucalyptus grandis HOM05D000149 ORTHO05D000076 8.1e-06 54.3 120 34.2
GSVIVG01011642001 Vitis vinifera HOM05D000149 ORTHO05D000076 8.1e-06 54.3 99 34.3
GSVIVG01021440001 Vitis vinifera HOM05D000149 ORTHO05D000076 8.1e-06 54.3 99 34.3


User provided reference genes

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