Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 7.1e-107 390.6 194 100.0
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.2e-67 258.8 131 96.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 3.5e-61 238.8 151 78.8
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.8e-60 235.3 135 84.4
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.8e-57 226.5 135 83.0
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 8.3e-55 217.6 135 78.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.4e-54 216.9 135 78.5
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 1.8e-54 216.5 124 81.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 4.1e-54 215.3 136 79.4
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 4.5e-53 211.8 135 75.6
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 7.7e-53 211.1 151 70.2
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.3e-52 210.3 134 79.1
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.3e-52 209.5 135 75.6
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.9e-52 209.1 135 73.3
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 8.6e-52 207.6 135 74.1
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 8.6e-52 207.6 151 69.5
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.9e-51 206.5 135 75.6
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.5e-51 206.1 151 69.5
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.3e-51 205.3 134 77.6
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.6e-51 204.9 135 72.6
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 5.6e-51 204.9 122 79.5
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.5e-51 204.1 164 67.1
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 3.6e-50 202.2 135 72.6
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.7e-50 201.8 124 79.8
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 4.7e-50 201.8 133 75.2
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 6.1e-50 201.4 124 79.0
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 3.0e-49 199.1 135 74.1
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 4.0e-49 198.7 151 64.9
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 4.0e-49 198.7 121 76.9
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.2e-48 197.2 133 72.2
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.5e-48 196.8 137 74.5
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 2.0e-48 196.4 137 74.5
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.4e-48 195.7 151 66.2
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 5.7e-48 194.9 131 70.2
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 5.7e-48 194.9 124 75.0
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 7.5e-48 194.5 128 74.2
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 9.8e-48 194.1 135 67.4
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 9.8e-48 194.1 132 71.2
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.3e-47 193.7 123 72.4
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 2.2e-47 193.0 135 71.9
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 2.2e-47 193.0 124 74.2
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 2.9e-47 192.6 124 74.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 4.9e-47 191.8 121 76.0
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 6.4e-47 191.4 121 75.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 8.3e-47 191.0 136 69.1
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.4e-46 190.3 123 70.7
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.4e-46 190.3 152 63.8
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.4e-46 190.3 144 63.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 1.8e-46 189.9 123 70.7
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.1e-46 188.7 121 77.7
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 5.4e-46 188.3 148 68.2
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 7.0e-46 188.0 130 67.7
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 7.0e-46 188.0 133 70.7
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 9.2e-46 187.6 130 67.7
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 9.2e-46 187.6 137 70.1
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 1.2e-45 187.2 144 64.6
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 3.5e-45 185.7 120 74.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 7.8e-45 184.5 150 60.0
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.3e-44 183.7 122 69.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.7e-44 183.3 136 64.0
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 2.5e-43 179.5 122 72.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 7.3e-43 177.9 134 65.7
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 7.3e-43 177.9 122 67.2
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.2e-42 177.2 125 66.4
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.2e-42 177.2 151 61.6
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.5e-40 170.2 121 66.1
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 2.0e-40 169.9 122 67.2
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 9.8e-40 167.5 130 62.3
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 9.8e-40 167.5 126 64.3
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.2e-38 162.5 120 65.8
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 4.6e-37 158.7 120 63.3
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 6.6e-36 154.8 104 76.0
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 8.6e-36 154.5 105 72.4
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 7.3e-35 151.4 122 59.0
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 8.1e-34 147.9 150 52.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.1e-33 146.0 96 74.0
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.0e-33 145.6 118 57.6
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.0e-33 145.6 118 57.6
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.0e-33 145.6 118 57.6
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 3.7e-31 139.0 139 56.1
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 7.8e-29 131.3 125 52.8
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 3.5e-13 79.3 63 57.1


User provided reference genes

Program Settings