Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10989 Corylus avellana HOM05D001046 ORTHO05D007174 3.6e-82 308.1 151 100.0
Cfa008619 Carpinus fangiana HOM05D001046 ORTHO05D007174 2.7e-61 238.8 141 87.2
QL01p001482 Quercus lobata HOM05D001046 ORTHO05D007174 1.4e-57 226.5 142 78.9
FAN12G0077 Fragaria x ananassa HOM05D001046 ORTHO05D007174 2.7e-53 212.2 142 74.6
TWI31G0274 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 3.5e-53 211.8 142 73.9
FAN07G0377 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.3e-52 209.9 142 73.9
FAN17G1443 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.8e-52 209.5 142 73.9
CiPaw.05G250600 Carya illinoinensis HOM05D001046 ORTHO05D007174 2.3e-52 209.1 143 77.6
GSVIVG01011746001 Vitis vinifera HOM05D001046 ORTHO05D007174 1.1e-51 206.8 140 73.6
Dinv14424 Davidia involucrata HOM05D001046 ORTHO05D007174 8.1e-50 200.7 142 71.8
Prupe.1G326000 Prunus persica HOM05D001046 ORTHO05D007174 1.4e-49 199.9 142 73.9
Sabra08G0098800 Salix brachista HOM05D001046 ORTHO05D007174 1.4e-49 199.9 132 78.0
Atru.chr11.504 Acer truncatum HOM05D001046 ORTHO05D007174 1.8e-49 199.5 142 71.8
TWI75G1880 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 2.4e-49 199.1 142 71.1
MD16G1027200 Malus domestica HOM05D001046 ORTHO05D007174 4.0e-49 198.4 142 73.2
RcHm_v2.0_Chr4g0441441 Rosa chinensis HOM05D001046 ORTHO05D007174 4.0e-49 198.4 142 73.2
Sc04g0005400 Simmondsia chinensis HOM05D001046 ORTHO05D007174 9.0e-49 197.2 142 71.8
FvH4_4g32570 Fragaria vesca HOM05D001046 ORTHO05D007174 1.5e-48 196.4 142 72.5
MD13G1024500 Malus domestica HOM05D001046 ORTHO05D007174 2.6e-48 195.7 142 72.5
CANSAT64G0447 Cannabis sativa HOM05D001046 ORTHO05D007174 3.4e-48 195.3 142 71.8
PGR119G0737 Punica granatum HOM05D001046 ORTHO05D007174 7.6e-48 194.1 142 72.5
arahy.Tifrunner.gnm1.ann1.3TS05T Arachis hypogaea HOM05D001046 ORTHO05D007174 1.3e-47 193.4 142 69.7
MELO3C018345.2 Cucumis melo HOM05D001046 ORTHO05D007174 2.9e-47 192.2 142 68.3
TAR622G0350 Trochodendron aralioides HOM05D001046 ORTHO05D007174 2.9e-47 192.2 142 70.4
TAR622G0834 Trochodendron aralioides HOM05D001046 ORTHO05D007174 2.9e-47 192.2 142 70.4
Manes.15G128300 Manihot esculenta HOM05D001046 ORTHO05D007174 1.1e-46 190.3 142 69.7
Ca_30694_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 1.4e-46 189.9 136 70.6
Potri.010G111900 Populus trichocarpa HOM05D001046 ORTHO05D007174 1.9e-46 189.5 142 71.1
Ciclev10014169m.g Citrus clementina HOM05D001046 ORTHO05D007174 7.1e-46 187.6 142 69.0
Rhsim09G0066100 Rhododendron simsii HOM05D001046 ORTHO05D007174 7.1e-46 187.6 142 69.0
arahy.Tifrunner.gnm1.ann1.R35CQ9 Arachis hypogaea HOM05D001046 ORTHO05D007174 9.3e-46 187.2 142 68.3
Thecc.02G282700 Theobroma cacao HOM05D001046 ORTHO05D007174 2.7e-45 185.7 142 66.2
Ca_18737_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 3.5e-45 185.3 132 71.2
Eucgr.G02183 Eucalyptus grandis HOM05D001046 ORTHO05D007174 3.5e-45 185.3 141 68.1
COL.COLO4_13162 Corchorus olitorius HOM05D001046 ORTHO05D007174 4.6e-45 184.9 142 66.9
TPR.G38338 Trifolium pratense HOM05D001046 ORTHO05D007174 4.6e-45 184.9 133 72.2
Oeu063607.3 Olea europaea HOM05D001046 ORTHO05D007174 1.8e-44 183.0 142 67.6
SalBow8G1368 Salvia bowleyana HOM05D001046 ORTHO05D007174 1.8e-44 183.0 142 65.5
SalBow8G3528 Salvia bowleyana HOM05D001046 ORTHO05D007174 1.8e-44 183.0 142 65.5
EL10Ac1g02062 Beta vulgaris HOM05D001046 ORTHO05D007174 2.3e-44 182.6 142 66.9
Psat7g128600 Pisum sativum HOM05D001046 ORTHO05D007174 2.3e-44 182.6 132 70.5
AUR62014179 Chenopodium quinoa HOM05D001046 ORTHO05D007174 3.0e-44 182.2 142 68.3
Lalb_Chr09g0328541 Lupinus albus HOM05D001046 ORTHO05D007174 3.0e-44 182.2 142 66.9
Medtr4g084660 Medicago truncatula HOM05D001046 ORTHO05D007174 3.0e-44 182.2 132 71.2
AUR62002755 Chenopodium quinoa HOM05D001046 ORTHO05D007174 3.9e-44 181.8 142 66.9
Glyma.07G218600 Glycine max HOM05D001046 ORTHO05D007174 3.9e-44 181.8 142 66.2
Potri.008G130200 Populus trichocarpa HOM05D001046 ORTHO05D007174 3.9e-44 181.8 142 69.0
vmacro00411 Vaccinium macrocarpon HOM05D001046 ORTHO05D007174 3.9e-44 181.8 142 66.9
Cpa.g.sc65.149 Carica papaya HOM05D001046 ORTHO05D007174 5.1e-44 181.4 142 69.0
Phvul.002G095000 Phaseolus vulgaris HOM05D001046 ORTHO05D007174 5.1e-44 181.4 142 66.9
Nn4g24188 Nelumbo nucifera HOM05D001046 ORTHO05D007174 8.7e-44 180.6 142 66.9
Actinidia18443 Actinidia chinensis HOM05D001046 ORTHO05D007174 1.5e-43 179.9 145 66.9
CAN.G1298.31 Capsicum annuum HOM05D001046 ORTHO05D007174 1.5e-43 179.9 145 66.2
Nitab4.5_0000688g0050 Nicotiana tabacum HOM05D001046 ORTHO05D007174 1.5e-43 179.9 144 66.7
VMungo0251G1068 Vigna mungo HOM05D001046 ORTHO05D007174 1.5e-43 179.9 142 65.5
CSS0021601 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 1.9e-43 179.5 142 69.0
CSS0048168 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 1.9e-43 179.5 142 69.0
Duzib251G0115 Durio zibethinus HOM05D001046 ORTHO05D007174 1.9e-43 179.5 142 64.8
Lj6A745T54 Lonicera japonica HOM05D001046 ORTHO05D007174 3.3e-43 178.7 147 64.6
Lalb_Chr16g0385001 Lupinus albus HOM05D001046 ORTHO05D007174 3.3e-43 178.7 142 66.2
Glyma.20G017000 Glycine max HOM05D001046 ORTHO05D007174 4.3e-43 178.3 142 64.8
CARHR143980 Cardamine hirsuta HOM05D001046 ORTHO05D007174 9.6e-43 177.2 142 65.5
CsaV3_5G013320 Cucumis sativus L. HOM05D001046 ORTHO05D007174 1.3e-42 176.8 142 66.9
Peaxi162Scf00159g01020 Petunia axillaris HOM05D001046 ORTHO05D007174 1.3e-42 176.8 148 64.9
Lj4g0011214 Lotus japonicus HOM05D001046 ORTHO05D007174 1.6e-42 176.4 142 66.2
MSTRG.13593 Avicennia marina HOM05D001046 ORTHO05D007174 2.1e-42 176.0 142 64.8
Aa31LG2G8470 Aethionema arabicum HOM05D001046 ORTHO05D007174 2.8e-42 175.6 142 66.2
AT2G01460 Arabidopsis thaliana HOM05D001046 ORTHO05D007174 2.8e-42 175.6 142 65.5
Migut.E00432 Erythranthe guttata HOM05D001046 ORTHO05D007174 1.4e-41 173.3 142 63.4
SGA_v2.0_scaffold257G45685 Striga asiatica HOM05D001046 ORTHO05D007174 1.4e-41 173.3 132 67.4
C02p49560 Brassica napus HOM05D001046 ORTHO05D007174 1.8e-41 172.9 142 66.2
BcaC03g17041 Brassica carinata HOM05D001046 ORTHO05D007174 2.4e-41 172.6 142 65.5
Carub.0005s0042 Capsella rubella HOM05D001046 ORTHO05D007174 2.4e-41 172.6 142 64.8
Sp2g12910 Schrenkiella parvula HOM05D001046 ORTHO05D007174 2.4e-41 172.6 142 64.8
BcaB07g30397 Brassica carinata HOM05D001046 ORTHO05D007174 4.1e-41 171.8 142 64.8
BolC2t11035H Brassica oleracea HOM05D001046 ORTHO05D007174 4.1e-41 171.8 142 65.5
A02p31990 Brassica napus HOM05D001046 ORTHO05D007174 5.3e-41 171.4 142 65.5
Sopen05g003840 Solanum pennellii HOM05D001046 ORTHO05D007174 6.9e-41 171.0 145 64.8
Thhalv10000761m.g Eutrema salsugineum HOM05D001046 ORTHO05D007174 9.0e-41 170.6 142 64.8
BraA02t08210Z Brassica rapa HOM05D001046 ORTHO05D007174 1.2e-40 170.2 142 64.8
Sed0013317 Sechium edule HOM05D001046 ORTHO05D007174 1.5e-40 169.9 142 64.1
PGSC0003DMG402018402 Solanum tuberosum HOM05D001046 ORTHO05D007174 2.6e-40 169.1 145 63.4
THA.LOC104824139 Tarenaya hassleriana HOM05D001046 ORTHO05D007174 2.6e-40 169.1 142 64.1
PSO478G0704 Papaver somniferum HOM05D001046 ORTHO05D007174 4.5e-40 168.3 142 63.4
Cc11_g08540 Coffea canephora HOM05D001046 ORTHO05D007174 7.6e-40 167.5 142 60.6
Gorai.005G161200 Gossypium raimondii HOM05D001046 ORTHO05D007174 1.3e-39 166.8 142 62.7
Gohir.A03G120500 Gossypium hirsutum HOM05D001046 ORTHO05D007174 2.2e-39 166.0 142 62.7
Duzib268G1566 Durio zibethinus HOM05D001046 ORTHO05D007174 5.0e-39 164.9 142 61.3
ECA234G2117 Erigeron canadensis HOM05D001046 ORTHO05D007174 7.2e-38 161.0 142 59.9
Solyc05g007990.4 Solanum lycopersicum HOM05D001046 ORTHO05D007174 7.2e-38 161.0 145 62.1
CDE07G1190 Ceratophyllum demersum HOM05D001046 ORTHO05D007174 1.2e-37 160.2 142 59.9
DCAR_030226 Daucus carota HOM05D001046 ORTHO05D007174 7.9e-37 157.5 145 57.9
unitig_699.g19534 Utricularia gibba HOM05D001046 ORTHO05D007174 1.0e-36 157.1 142 57.0
Gohir.D02G143700 Gossypium hirsutum HOM05D001046 ORTHO05D007174 6.3e-34 147.9 124 60.5
Aqoxy3G00111 Aquilegia oxysepala HOM05D001046 ORTHO05D007174 2.4e-33 146.0 144 56.2
SHI04600 Sapria himalayana HOM05D001046 ORTHO05D007174 7.7e-32 141.0 144 56.2
Lsat_1_v5_gn_4_13960 Lactuca sativa HOM05D001046 ORTHO05D007174 1.7e-31 139.8 144 51.4
HanXRQChr17g0566901 Helianthus annuus HOM05D001046 ORTHO05D007174 8.5e-31 137.5 142 54.9
SEGI_20016 Sequoiadendron giganteum HOM05D001046 ORTHO05D007174 1.9e-30 136.3 148 50.0
ClCG11G001250 Citrullus lanatus HOM05D001046 ORTHO05D007174 3.6e-29 132.1 108 63.9
ATR1102G048 Amborella trichopoda HOM05D001046 ORTHO05D007174 5.1e-28 128.3 135 54.1
HPP92_023398 Vanilla planifolia HOM05D001046 ORTHO05D007174 2.0e-27 126.3 131 51.1
Os04g0280200 Oryza sativa ssp. japonica HOM05D001046 ORTHO05D007174 2.8e-26 122.5 143 49.7
Hund24973 Selenicereus undatus HOM05D001046 ORTHO05D007174 1.5e-24 116.7 73 75.3
Mapoly0011s0131 Marchantia polymorpha HOM05D001046 ORTHO05D007174 7.4e-19 97.8 161 39.1
Pp3c20_690 Physcomitrium patens HOM05D001046 ORTHO05D007174 2.2e-18 96.3 148 40.5
AagrBONN_evm.TU.Sc2ySwM_228.2448 Anthoceros agrestis HOM05D001046 ORTHO05D007174 5.3e-17 91.7 174 36.2


User provided reference genes

Program Settings