Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 2.5e-74 282.0 135 100.0
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 4.3e-26 121.7 93 71.0
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 1.5e-23 113.2 93 66.7
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 9.3e-21 104.0 93 61.3
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.6e-20 103.2 93 61.3
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 2.1e-20 102.8 86 65.1
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 7.9e-20 100.9 93 59.1
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 7.9e-20 100.9 93 59.1
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.8e-19 99.8 93 58.1
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 2.3e-19 99.4 93 59.1
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 2.3e-19 99.4 93 59.1
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 3.0e-19 99.0 93 58.1
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 3.9e-19 98.6 90 58.9
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 8.7e-19 97.4 91 57.1
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 1.1e-18 97.1 88 60.2
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.1e-18 97.1 88 60.2
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.9e-18 96.3 88 59.1
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 3.3e-18 95.5 91 56.0
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 3.3e-18 95.5 91 56.0
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 3.3e-18 95.5 91 56.0
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 3.3e-18 95.5 90 58.9
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 5.6e-18 94.7 84 59.5
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 5.6e-18 94.7 93 51.6
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 7.4e-18 94.4 91 56.0
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 9.6e-18 94.0 92 55.4
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 9.6e-18 94.0 88 59.1
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 1.3e-17 93.6 90 56.7
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 2.1e-17 92.8 82 57.3
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 2.1e-17 92.8 93 54.8
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 2.8e-17 92.4 87 58.6
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 2.8e-17 92.4 87 58.6
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 2.8e-17 92.4 78 61.5
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 4.8e-17 91.7 93 54.8
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 4.8e-17 91.7 93 57.0
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 6.2e-17 91.3 94 55.3
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 6.2e-17 91.3 91 56.0
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 8.1e-17 90.9 81 60.5
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 8.1e-17 90.9 82 53.7
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 8.1e-17 90.9 87 55.2
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 8.1e-17 90.9 91 56.0
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.4e-16 90.1 93 53.8
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 1.8e-16 89.7 113 43.4
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 2.4e-16 89.4 90 55.6
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 2.4e-16 89.4 93 52.7
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 3.1e-16 89.0 93 52.7
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 4.0e-16 88.6 90 55.6
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 4.0e-16 88.6 90 55.6
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 4.0e-16 88.6 90 53.3
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 5.3e-16 88.2 90 52.2
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 5.3e-16 88.2 90 52.2
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 5.3e-16 88.2 81 58.0
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 5.3e-16 88.2 81 58.0
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 6.9e-16 87.8 78 59.0
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 6.9e-16 87.8 90 55.6
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 6.9e-16 87.8 85 58.8
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 9.0e-16 87.4 87 54.0
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 9.0e-16 87.4 78 56.4
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 1.5e-15 86.7 78 56.4
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.5e-15 86.7 81 56.8
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 1.5e-15 86.7 79 59.5
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 1.5e-15 86.7 87 56.3
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 1.5e-15 86.7 93 57.0
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 1.5e-15 86.7 86 54.7
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 2.6e-15 85.9 89 56.2
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 2.6e-15 85.9 81 58.0
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 7.6e-15 84.3 82 58.5
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 9.9e-15 84.0 82 58.5
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 9.9e-15 84.0 84 56.0
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.3e-14 83.6 87 54.0
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 1.7e-14 83.2 88 52.3
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 2.2e-14 82.8 82 52.4
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 2.9e-14 82.4 81 54.3
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 2.9e-14 82.4 87 55.2
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 3.8e-14 82.0 92 52.2
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 4.9e-14 81.6 92 53.3
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 4.9e-14 81.6 82 51.2
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 1.9e-13 79.7 79 53.2
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 1.9e-13 79.7 90 50.0
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 1.9e-13 79.7 79 51.9
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 2.4e-13 79.3 79 55.7
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 3.2e-13 79.0 92 48.9
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 5.5e-13 78.2 87 55.2
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 7.1e-13 77.8 92 50.0
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 1.2e-12 77.0 84 53.6
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.6e-12 76.6 43 83.7
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 3.5e-12 75.5 75 56.0
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 3.5e-12 75.5 53 75.5
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 6.0e-12 74.7 84 52.4
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 1.0e-11 73.9 42 81.0
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.3e-11 73.6 43 79.1
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.9e-10 69.7 79 48.1
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 2.5e-10 69.3 78 47.4
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 3.3e-10 68.9 88 47.7
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 2.1e-09 66.2 84 44.0
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 2.1e-09 66.2 81 43.2
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 6.2e-09 64.7 78 47.4
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 3.1e-08 62.4 52 59.6
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.6e-07 59.3 78 43.6
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 3.4e-07 58.9 43 67.4


User provided reference genes

Program Settings