Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 6.2e-111 404.1 192 100.0
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 3.6e-26 122.5 76 71.1
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.7e-20 103.6 84 57.1
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 2.9e-20 102.8 88 60.2
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 1.9e-19 100.1 67 68.7
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 6.1e-18 95.1 86 57.0
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 1.8e-17 93.6 80 56.2
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 3.4e-16 89.4 88 51.1
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 4.4e-16 89.0 73 57.5
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 4.4e-16 89.0 127 44.1
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 4.9e-15 85.5 123 44.7
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 1.1e-14 84.3 122 43.4
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 9.2e-14 81.3 122 43.4
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 9.2e-14 81.3 119 39.5
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 2.7e-13 79.7 63 57.1
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 3.5e-13 79.3 120 40.0
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 7.8e-13 78.2 165 33.3
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 1.3e-12 77.4 111 44.1
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 3.8e-12 75.9 75 53.3
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 3.8e-12 75.9 119 42.0
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 5.0e-12 75.5 74 48.6
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 5.0e-12 75.5 118 39.8
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 6.6e-12 75.1 74 50.0
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 1.5e-11 73.9 72 47.2
TPR.G34432 Trifolium pratense HOM05D008187 ORTHO05D009830 1.9e-11 73.6 73 46.6
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.3e-11 72.8 79 49.4
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.3e-11 72.8 79 49.4
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 4.3e-11 72.4 79 49.4
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.3e-11 72.4 79 49.4
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.3e-11 72.4 79 49.4
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 5.6e-11 72.0 114 37.7
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 5.6e-11 72.0 113 41.6
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 2.1e-10 70.1 123 39.0
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 2.1e-10 70.1 121 37.2
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.6e-10 69.3 76 48.7
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.6e-10 69.3 76 48.7
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 1.0e-09 67.8 73 52.1
Manes.18G118500 Manihot esculenta HOM05D000005 ORTHO05D000012 1.4e-09 67.4 84 36.9
Rhsim11G0011200 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.3e-09 66.6 86 34.9
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 3.1e-09 66.2 75 48.0
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 4.0e-09 65.9 89 43.8
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 4.0e-09 65.9 89 43.8
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 4.0e-09 65.9 98 36.7
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 5.2e-09 65.5 126 34.1
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 8.9e-09 64.7 41 65.9
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 1.5e-08 63.9 52 50.0
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 1.5e-08 63.9 84 45.2
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 2.6e-08 63.2 116 37.1
Rhsim11G0061400 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.6e-08 63.2 86 32.6
Atru.chr3.2011 Acer truncatum HOM05D000003 ORTHO05D000007 5.8e-08 62.0 77 39.0
Aqoxy2G02805 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.8e-08 62.0 89 40.4
Rhsim12G0084200 Rhododendron simsii HOM05D000089 ORTHO05D000007 5.8e-08 62.0 85 38.8
QL11p050687 Quercus lobata HOM05D023100 ORTHO05D026086 7.5e-08 61.6 84 40.5
Dinv17941 Davidia involucrata HOM05D028635 ORTHO05D000007 1.3e-07 60.8 83 32.5
Gorai.007G220400 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.3e-07 60.8 87 34.5
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 1.3e-07 60.8 97 40.2
QL10p051550 Quercus lobata HOM05D023100 ORTHO05D026086 1.3e-07 60.8 62 48.4
Rhsim02G0142500 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.3e-07 60.8 85 35.3
Rhsim04G0043700 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.7e-07 60.5 80 36.2
Rhsim01G0276400 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.2e-07 60.1 98 31.6
Rhsim04G0153000 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.2e-07 60.1 86 31.4
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 2.2e-07 60.1 80 43.8
Atru.chr5.2070 Acer truncatum HOM05D000003 ORTHO05D000007 2.9e-07 59.7 109 33.0
Aqoxy7G01708 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 2.9e-07 59.7 89 39.3
Aqoxy7G02859 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 2.9e-07 59.7 82 35.4
PGR004G0578 Punica granatum HOM05D000003 ORTHO05D000004 2.9e-07 59.7 106 34.0
Atru.chr5.2027 Acer truncatum HOM05D000003 ORTHO05D000007 3.7e-07 59.3 77 37.7
Rhsim04G0101400 Rhododendron simsii HOM05D000031 ORTHO05D000030 3.7e-07 59.3 87 34.5
Rhsim01G0053400 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.9e-07 58.9 80 35.0
Aqoxy2G01660 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 6.4e-07 58.5 80 38.8
Rhsim10G0086100 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.3e-07 58.2 81 39.5
Rhsim12G0066300 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.3e-07 58.2 86 32.6
Rhsim13G0137500 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.3e-07 58.2 86 31.4
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 1.1e-06 57.8 72 41.7
Rhsim11G0155800 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.1e-06 57.8 80 33.8
MELO3C035452.2 Cucumis melo HOM05D013939 ORTHO05D015887 1.4e-06 57.4 84 34.5
Rhsim01G0145600 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.4e-06 57.4 98 33.7
Rhsim04G0136500 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.4e-06 57.4 97 36.1
Atru.chr1.2113 Acer truncatum HOM05D000003 ORTHO05D000007 1.9e-06 57.0 77 35.1
RhsimUnG0127000 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.9e-06 57.0 80 33.8
TAR374G1419 Trochodendron aralioides HOM05D003603 ORTHO05D009830 1.9e-06 57.0 84 40.5
Rhsim01G0069100 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.4e-06 56.6 116 28.4
Rhsim11G0143400 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.4e-06 56.6 85 32.9
Aqoxy2G02537 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.1e-06 55.8 76 36.8
Aqoxy7G01173 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.1e-06 55.8 89 38.2
BraA03t14225Z Brassica rapa HOM05D000848 ORTHO05D000007 5.4e-06 55.5 97 27.8
Rhsim11G0147600 Rhododendron simsii HOM05D000003 ORTHO05D000007 5.4e-06 55.5 104 32.7
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 7.0e-06 55.1 37 59.5
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 7.0e-06 55.1 72 45.8
Aqoxy5G02895 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 9.2e-06 54.7 101 32.7
BcaC05g27937 Brassica carinata HOM05D003603 ORTHO05D004186 9.2e-06 54.7 101 33.7
A05p25320 Brassica napus HOM05D003603 ORTHO05D004186 9.2e-06 54.7 101 33.7
C05p39410 Brassica napus HOM05D003603 ORTHO05D004186 9.2e-06 54.7 101 33.7
BolC5t32678H Brassica oleracea HOM05D003603 ORTHO05D004186 9.2e-06 54.7 101 33.7
BraA05t21417Z Brassica rapa HOM05D003603 ORTHO05D004186 9.2e-06 54.7 101 33.7
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 9.2e-06 54.7 72 45.8
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 9.2e-06 54.7 72 45.8
Rhsim11G0071500 Rhododendron simsii HOM05D001245 ORTHO05D004475 9.2e-06 54.7 88 35.2


User provided reference genes

Program Settings