Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10797 Corylus avellana HOM05D003290 ORTHO05D003866 9.9e-118 426.8 213 100.0
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 1.2e-27 127.5 65 95.4
Sc03g0005950 Simmondsia chinensis HOM05D003290 ORTHO05D003866 1.2e-25 120.9 65 87.7
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 1.2e-25 120.9 64 87.5
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.5e-25 120.6 65 87.7
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 1.5e-25 120.6 65 87.7
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 2.0e-25 120.2 65 87.7
TAR629G1764 Trochodendron aralioides HOM05D003290 ORTHO05D003866 2.0e-25 120.2 65 87.7
FvH4_4g35890 Fragaria vesca HOM05D003290 ORTHO05D003866 4.4e-25 119.0 65 86.2
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 4.4e-25 119.0 65 86.2
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 4.4e-25 119.0 65 86.2
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 1.7e-24 117.1 65 84.6
CiPaw.05G160000 Carya illinoinensis HOM05D003290 ORTHO05D003866 1.7e-24 117.1 65 86.2
Dinv02702 Davidia involucrata HOM05D003290 ORTHO05D003866 1.7e-24 117.1 62 90.3
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 2.9e-24 116.3 65 83.1
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 2.9e-24 116.3 65 83.1
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 2.9e-24 116.3 65 83.1
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 2.9e-24 116.3 65 84.6
Nitab4.5_0001529g0050 Nicotiana tabacum HOM05D003290 ORTHO05D003866 2.9e-24 116.3 101 63.4
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 2.9e-24 116.3 65 83.1
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 3.7e-24 115.9 65 84.6
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 3.7e-24 115.9 65 83.1
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 3.7e-24 115.9 65 83.1
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 3.7e-24 115.9 65 84.6
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 3.7e-24 115.9 106 61.3
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 4.9e-24 115.5 65 84.6
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 4.9e-24 115.5 65 81.5
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 6.4e-24 115.2 65 84.6
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 6.4e-24 115.2 65 84.6
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 6.4e-24 115.2 65 84.6
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 8.3e-24 114.8 65 83.1
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 8.3e-24 114.8 65 83.1
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 8.3e-24 114.8 97 64.9
Os12g0641100 Oryza sativa ssp. japonica HOM05D003290 ORTHO05D003866 8.3e-24 114.8 65 83.1
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 8.3e-24 114.8 65 81.5
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 1.1e-23 114.4 64 84.4
Ciclev10018329m.g Citrus clementina HOM05D003290 ORTHO05D003866 1.4e-23 114.0 65 83.1
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 1.4e-23 114.0 65 81.5
Cpa.g.sc2.63 Carica papaya HOM05D003290 ORTHO05D003866 1.8e-23 113.6 65 81.5
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.8e-23 113.6 105 57.1
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 3.2e-23 112.8 65 83.1
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 3.2e-23 112.8 65 81.5
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 3.2e-23 112.8 65 81.5
Carub.0005s0099 Capsella rubella HOM05D003290 ORTHO05D003866 4.1e-23 112.5 65 80.0
MD13G1014200 Malus domestica HOM05D003290 ORTHO05D003866 4.1e-23 112.5 71 78.9
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 4.1e-23 112.5 65 80.0
vmacro10755 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 4.1e-23 112.5 116 58.6
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 7.0e-23 111.7 65 78.5
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 7.0e-23 111.7 106 60.4
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 9.2e-23 111.3 65 80.0
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 1.2e-22 110.9 112 58.9
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 1.2e-22 110.9 65 81.5
CDE06G1581 Ceratophyllum demersum HOM05D003290 ORTHO05D003866 1.6e-22 110.5 113 54.9
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 1.6e-22 110.5 120 53.3
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 1.6e-22 110.5 120 53.3
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 1.6e-22 110.5 120 53.3
PSO339G1388 Papaver somniferum HOM05D003290 ORTHO05D003866 1.6e-22 110.5 112 58.0
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 2.0e-22 110.2 65 78.5
Thhalv10003547m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 2.0e-22 110.2 65 78.5
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 2.7e-22 109.8 65 78.5
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 2.7e-22 109.8 112 58.0
MBI13_g26466_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 2.7e-22 109.8 112 58.0
AL1G26630 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 3.5e-22 109.4 113 55.8
Sp1g13030 Schrenkiella parvula HOM05D003290 ORTHO05D003866 3.5e-22 109.4 90 62.2
MD16G1011500 Malus domestica HOM05D003290 ORTHO05D003866 4.6e-22 109.0 138 49.3
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 4.6e-22 109.0 120 54.2
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 4.6e-22 109.0 65 75.4
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 5.9e-22 108.6 65 76.9
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 5.9e-22 108.6 120 53.3
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 7.8e-22 108.2 120 53.3
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 7.8e-22 108.2 120 53.3
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 7.8e-22 108.2 95 62.1
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 7.8e-22 108.2 95 62.1
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 1.0e-21 107.8 106 61.3
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 1.0e-21 107.8 87 65.5
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 1.0e-21 107.8 93 59.1
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 1.0e-21 107.8 112 55.4
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 1.0e-21 107.8 120 54.2
unitig_27.g25301 Utricularia gibba HOM05D003290 ORTHO05D003866 1.0e-21 107.8 65 76.9
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 1.3e-21 107.5 120 55.8
Carub.0001s1442 Capsella rubella HOM05D003290 ORTHO05D003866 1.7e-21 107.1 113 54.9
CARHR015160 Cardamine hirsuta HOM05D003290 ORTHO05D003866 1.7e-21 107.1 113 54.9
AT1G14660 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 2.3e-21 106.7 113 54.9
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 2.3e-21 106.7 120 52.5
AL5G11170 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 3.0e-21 106.3 65 76.9
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 3.9e-21 105.9 114 55.3
Thhalv10006906m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 3.9e-21 105.9 113 54.9
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 5.0e-21 105.5 95 60.0
Sp2g13410 Schrenkiella parvula HOM05D003290 ORTHO05D003866 5.0e-21 105.5 65 75.4
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 6.6e-21 105.1 125 53.6
AT2G01980 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 6.6e-21 105.1 65 76.9
PGR102G1943 Punica granatum HOM05D003290 ORTHO05D003866 6.6e-21 105.1 90 60.0
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 6.6e-21 105.1 120 51.7
BcaB02g06535 Brassica carinata HOM05D003290 ORTHO05D003866 8.6e-21 104.8 95 57.9
BcaC05g25381 Brassica carinata HOM05D003290 ORTHO05D003866 8.6e-21 104.8 95 57.9
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 8.6e-21 104.8 117 54.7
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.1e-20 104.4 67 71.6
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 1.1e-20 104.4 106 58.5
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 1.1e-20 104.4 118 53.4
Nitab4.5_0005031g0060 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.5e-20 104.0 89 59.6
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 1.5e-20 104.0 114 54.4
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.5e-20 104.0 114 55.3
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 1.5e-20 104.0 112 56.2
Cc11_g05270 Coffea canephora HOM05D003290 ORTHO05D003866 1.9e-20 103.6 58 87.9
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.9e-20 103.6 106 58.5
A09p23700 Brassica napus HOM05D003290 ORTHO05D003866 2.5e-20 103.2 113 53.1
BolC9t55917H Brassica oleracea HOM05D003290 ORTHO05D003866 2.5e-20 103.2 113 53.1
BraA09t37969Z Brassica rapa HOM05D003290 ORTHO05D003866 2.5e-20 103.2 113 53.1
C05p12620 Brassica napus HOM05D003290 ORTHO05D003866 4.3e-20 102.4 95 56.8
BolC5t30005H Brassica oleracea HOM05D003290 ORTHO05D003866 4.3e-20 102.4 95 56.8
BraA06t24252Z Brassica rapa HOM05D003290 ORTHO05D003866 4.3e-20 102.4 95 56.8
BcaC04g21541 Brassica carinata HOM05D003290 ORTHO05D003866 5.6e-20 102.1 113 52.2
C09p30540 Brassica napus HOM05D003290 ORTHO05D003866 5.6e-20 102.1 113 52.2
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 5.6e-20 102.1 88 60.2
ECA246G3356 Erigeron canadensis HOM05D003290 ORTHO05D003866 5.6e-20 102.1 113 54.0
BcaC05g25383 Brassica carinata HOM05D003290 ORTHO05D003866 9.5e-20 101.3 95 55.8
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 1.2e-19 100.9 105 51.4
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 1.6e-19 100.5 107 51.4
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 2.1e-19 100.1 107 53.3
DCAR_030318 Daucus carota HOM05D003290 ORTHO05D003866 2.1e-19 100.1 90 57.8
Peaxi162Scf00130g01212 Petunia axillaris HOM05D003290 ORTHO05D003866 2.8e-19 99.8 86 58.1
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 6.2e-19 98.6 134 47.0
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 2.3e-18 96.7 107 50.5
Lsat_1_v5_gn_6_55260 Lactuca sativa HOM05D003290 ORTHO05D003866 3.1e-18 96.3 118 48.3
Solyc04g018090.2 Solanum lycopersicum HOM05D003290 ORTHO05D003866 5.2e-18 95.5 173 35.8
Pp3c22_9570 Physcomitrium patens HOM05D003290 ORTHO05D003866 1.2e-17 94.4 115 50.4
Sopen04g009310 Solanum pennellii HOM05D003290 ORTHO05D003866 1.2e-17 94.4 134 41.8
SMO367G0300 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 1.5e-17 94.0 68 66.2
Mapoly0206s0002 Marchantia polymorpha HOM05D003290 ORTHO05D003866 2.6e-17 93.2 107 49.5
AagrBONN_evm.TU.Sc2ySwM_344.5331 Anthoceros agrestis HOM05D003290 ORTHO05D003866 3.4e-17 92.8 120 47.5
Medtr2g038400 Medicago truncatula HOM05D003290 ORTHO05D003866 7.5e-17 91.7 58 74.1
AagrBONN_evm.TU.Sc2ySwM_368.1085 Anthoceros agrestis HOM05D003290 ORTHO05D003866 3.7e-16 89.4 95 50.5
Mapoly0062s0025 Marchantia polymorpha HOM05D003290 ORTHO05D003866 4.9e-16 89.0 109 49.5
SMO367G0872 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 4.9e-16 89.0 107 50.5
MCO04G150 Micromonas commoda HOM05D003290 ORTHO05D003866 1.4e-15 87.4 64 60.9
Pp3c16_14280 Physcomitrium patens HOM05D003290 ORTHO05D003866 1.0e-13 81.3 115 46.1
DCAR_030316 Daucus carota HOM05D003290 ORTHO05D003866 4.7e-11 72.4 52 67.3
Aa31LG2G2650 Aethionema arabicum HOM05D003290 ORTHO05D003866 1.4e-10 70.9 64 56.2
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 1.8e-10 70.5 36 88.9
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 1.8e-10 70.5 39 82.1
PRCOL_00005089 Prasinoderma coloniale HOM05D003290 ORTHO05D003866 6.8e-10 68.6 63 49.2
SHI04225 Sapria himalayana HOM05D003290 ORTHO05D003866 8.9e-10 68.2 79 53.2
Sp1g13020 Schrenkiella parvula HOM05D003290 ORTHO05D003866 3.4e-09 66.2 69 52.2
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 7.5e-09 65.1 94 46.8


User provided reference genes

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