Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 9.7e-92 340.1 170 100.0
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 1.8e-77 292.7 154 94.2
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 2.2e-64 249.2 130 96.2
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 4.7e-62 241.5 154 79.2
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 3.0e-61 238.8 155 78.1
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 1.2e-60 236.9 166 72.9
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 7.5e-60 234.2 154 74.0
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 7.7e-57 224.2 155 74.2
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 2.3e-56 222.6 160 68.8
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 8.9e-53 210.7 155 71.0
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 1.5e-52 209.9 158 70.3
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 1.7e-51 206.5 155 71.0
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 2.0e-49 199.5 159 66.0
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 1.7e-48 196.4 167 63.5
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 6.6e-48 194.5 158 63.3
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 6.6e-48 194.5 156 66.0
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 3.3e-47 192.2 155 65.2
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 9.5e-47 190.7 155 63.9
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 9.5e-47 190.7 151 63.6
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 1.2e-46 190.3 154 61.7
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 4.7e-46 188.3 170 57.6
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 6.2e-46 188.0 155 65.2
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 8.0e-46 187.6 154 64.9
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 1.8e-45 186.4 154 61.0
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 1.8e-45 186.4 156 65.4
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 1.8e-45 186.4 156 65.4
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 4.0e-45 185.3 146 69.2
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 1.2e-44 183.7 158 62.7
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.5e-44 183.3 155 64.5
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.6e-44 182.6 161 65.2
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 2.6e-44 182.6 155 60.0
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 2.6e-44 182.6 154 57.8
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 1.1e-42 177.2 147 59.9
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 1.4e-42 176.8 161 64.6
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.9e-42 176.4 163 59.5
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 4.1e-42 175.3 159 61.0
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 9.2e-42 174.1 154 60.4
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 4.6e-41 171.8 179 54.7
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 6.0e-41 171.4 160 59.4
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 6.0e-41 171.4 175 53.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 6.0e-41 171.4 147 58.5
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 1.0e-40 170.6 159 58.5
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 1.0e-40 170.6 155 59.4
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 1.0e-40 170.6 160 58.8
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 3.9e-40 168.7 159 56.6
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 1.1e-39 167.2 154 59.1
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 2.5e-39 166.0 161 57.8
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 2.5e-39 166.0 158 57.0
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 3.3e-39 165.6 160 60.0
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 3.3e-39 165.6 160 60.0
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 4.3e-39 165.2 161 57.8
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 9.5e-39 164.1 154 58.4
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 9.5e-39 164.1 160 59.4
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 2.1e-38 162.9 160 57.5
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 2.1e-38 162.9 160 57.5
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 4.7e-38 161.8 159 56.0
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 4.7e-38 161.8 99 78.8
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 6.2e-38 161.4 156 58.3
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 8.1e-38 161.0 159 56.0
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 1.4e-37 160.2 165 54.5
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 3.1e-37 159.1 156 58.3
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 5.2e-37 158.3 168 53.0
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 6.8e-37 157.9 159 58.5
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 8.9e-37 157.5 159 57.9
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 2.0e-36 156.4 156 57.7
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 2.0e-36 156.4 156 57.7
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 2.6e-36 156.0 156 56.4
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.6e-36 156.0 157 58.6
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 9.8e-36 154.1 156 57.1
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 9.8e-36 154.1 163 53.4
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 1.7e-35 153.3 133 59.4
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.4e-34 150.2 155 56.1
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.9e-34 149.8 155 56.8
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 4.1e-34 148.7 166 54.8
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 4.1e-34 148.7 141 57.4
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 7.1e-34 147.9 141 57.4
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 3.5e-33 145.6 142 56.3
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 1.0e-32 144.1 155 53.5
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 1.0e-32 144.1 144 56.2
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.1e-31 140.6 152 55.3
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 1.9e-31 139.8 120 60.0
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 1.9e-31 139.8 152 52.6
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 7.3e-31 137.9 141 51.8
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 2.3e-29 132.9 82 73.2
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 5.2e-29 131.7 159 53.5
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 6.8e-29 131.3 163 50.3
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 6.8e-29 131.3 117 56.4
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 3.8e-27 125.6 160 49.4
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 4.9e-27 125.2 166 51.2
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 6.4e-27 124.8 170 48.2
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 6.4e-27 124.8 117 58.1
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 1.1e-26 124.0 82 69.5
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 1.4e-26 123.6 160 48.1
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 2.4e-26 122.9 163 47.9
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 4.1e-26 122.1 166 50.0
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 5.4e-26 121.7 112 61.6
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 3.5e-25 119.0 160 47.5
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 6.0e-25 118.2 110 57.3
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 7.8e-25 117.9 159 48.4
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 7.8e-25 117.9 108 60.2
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 1.0e-24 117.5 86 66.3
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 2.3e-24 116.3 82 64.6
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 2.3e-24 116.3 86 65.1
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 1.1e-23 114.0 95 63.2
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 1.1e-21 107.5 134 50.7
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.4e-21 107.1 126 55.6
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 4.0e-21 105.5 107 59.8
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 5.2e-21 105.1 107 58.9
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 1.1e-18 97.4 131 43.5
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.9e-18 96.7 157 42.7
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 3.2e-18 95.9 102 55.9
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 4.2e-18 95.5 148 37.2
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 1.6e-17 93.6 91 53.8
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 2.1e-17 93.2 116 48.3
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 2.1e-17 93.2 91 52.7
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.0e-16 90.9 84 58.3
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 1.7e-16 90.1 93 48.4
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 5.1e-16 88.6 92 47.8
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 6.6e-16 88.2 84 57.1
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 1.1e-15 87.4 85 56.5
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 3.3e-15 85.9 50 74.0
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 7.3e-15 84.7 97 43.3
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 4.8e-14 82.0 135 40.0
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 2.0e-12 76.6 70 60.0
FvH4_6g36141 Fragaria vesca HOM05D002283 ORTHO05D005725 7.1e-10 68.2 83 50.6
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 5.6e-07 58.5 41 68.3


User provided reference genes

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