Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 1.4e-156 556.2 269 100.0
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 9.3e-73 277.7 160 80.6
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 2.1e-72 276.6 160 81.2
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 1.0e-71 274.2 159 81.1
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 1.3e-71 273.9 159 79.9
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 3.0e-71 272.7 159 80.5
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 6.7e-71 271.6 159 78.6
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 6.7e-71 271.6 159 78.6
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 4.3e-70 268.9 159 79.9
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 5.7e-70 268.5 160 78.8
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 1.6e-69 266.9 159 78.0
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 2.2e-69 266.5 159 77.4
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 2.8e-69 266.2 159 79.2
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 3.7e-69 265.8 160 78.8
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 8.2e-69 264.6 159 77.4
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 8.2e-69 264.6 159 77.4
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 1.8e-68 263.5 159 76.7
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 2.4e-68 263.1 161 77.0
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 3.1e-68 262.7 151 80.1
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 3.1e-68 262.7 162 77.2
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 3.1e-68 262.7 160 77.5
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 4.1e-68 262.3 160 75.0
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 5.3e-68 261.9 159 75.5
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 9.1e-68 261.2 159 76.1
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 9.1e-68 261.2 158 76.6
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 1.2e-67 260.8 159 74.2
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 1.5e-67 260.4 159 76.7
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 1.5e-67 260.4 160 76.9
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 3.4e-67 259.2 159 73.6
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 3.4e-67 259.2 160 76.2
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 5.9e-67 258.5 156 78.2
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 5.9e-67 258.5 160 75.0
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 7.7e-67 258.1 161 75.8
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 7.7e-67 258.1 159 75.5
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 1.3e-66 257.3 159 74.2
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 2.9e-66 256.1 160 74.4
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 2.9e-66 256.1 159 76.1
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 3.8e-66 255.8 160 76.2
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 5.0e-66 255.4 156 77.6
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 5.0e-66 255.4 159 73.6
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 6.5e-66 255.0 160 73.8
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 6.5e-66 255.0 159 73.6
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 1.1e-65 254.2 159 74.8
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 1.1e-65 254.2 163 73.0
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 1.9e-65 253.4 147 83.0
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 1.9e-65 253.4 160 73.1
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 3.2e-65 252.7 159 71.7
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 5.5e-65 251.9 160 71.2
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 5.5e-65 251.9 159 71.7
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 1.6e-64 250.4 157 75.2
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 4.6e-64 248.8 159 74.2
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 4.6e-64 248.8 152 76.3
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 7.9e-64 248.1 160 74.4
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 1.0e-63 247.7 197 62.9
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 1.0e-63 247.7 159 73.6
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 1.4e-63 247.3 159 73.0
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 1.8e-63 246.9 158 69.6
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 3.9e-63 245.7 159 71.1
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 3.9e-63 245.7 159 72.3
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 8.8e-63 244.6 159 73.6
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 2.0e-62 243.4 158 68.4
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.7e-61 240.4 183 63.4
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 8.2e-61 238.0 140 75.7
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 2.4e-60 236.5 161 69.6
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 3.1e-60 236.1 159 70.4
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 5.3e-60 235.3 157 69.4
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 5.3e-60 235.3 160 68.8
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 6.9e-60 235.0 159 69.2
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 6.9e-60 235.0 159 69.2
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 6.9e-60 235.0 159 69.2
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 9.1e-60 234.6 159 69.2
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 9.1e-60 234.6 159 69.2
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 1.2e-59 234.2 160 68.1
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.5e-59 233.8 159 69.8
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 1.5e-59 233.8 159 69.2
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 1.5e-59 233.8 160 68.1
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 2.0e-59 233.4 159 69.8
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 2.0e-59 233.4 159 68.6
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 2.6e-59 233.0 159 69.2
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 2.6e-59 233.0 159 69.8
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 4.5e-59 232.3 159 69.2
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 5.9e-59 231.9 159 71.1
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 7.7e-59 231.5 159 69.2
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 7.7e-59 231.5 159 69.2
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 7.7e-59 231.5 159 67.9
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 2.9e-58 229.6 159 68.6
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 2.9e-58 229.6 159 68.6
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 8.5e-58 228.0 160 66.9
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 4.2e-57 225.7 153 70.6
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 9.4e-57 224.6 159 63.5
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 2.7e-56 223.0 158 63.9
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 3.6e-56 222.6 153 69.9
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 4.7e-56 222.2 158 63.3
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 1.1e-54 217.6 160 65.6
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 2.2e-53 213.4 159 62.3
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 4.8e-53 212.2 159 61.6
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 8.2e-53 211.5 159 59.7
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 1.3e-50 204.1 159 64.2
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 4.7e-48 195.7 130 70.8
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 1.5e-46 190.7 157 57.3
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 2.0e-46 190.3 159 55.3
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 9.1e-44 181.4 159 52.8
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 4.5e-43 179.1 129 62.0
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea HOM05D005491 ORTHO05D006973 7.0e-36 155.2 91 81.3
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 1.7e-34 150.6 147 44.2
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 1.7e-34 150.6 129 57.4
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 4.2e-33 146.0 148 47.3
Glyma.14G098400 Glycine max HOM05D005491 ORTHO05D006973 1.6e-32 144.1 105 62.9
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 6.1e-32 142.1 86 75.6
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 3.0e-31 139.8 148 41.9
SMO146G0309 Selaginella moellendorffii HOM05D005491 ORTHO05D006973 3.0e-31 139.8 153 42.5
RcHm_v2.0_Chr3g0481151 Rosa chinensis HOM05D000090 ORTHO05D000083 1.4e-28 131.0 75 78.7
Medtr3g006055 Medicago truncatula HOM05D005491 ORTHO05D006973 7.0e-28 128.6 113 55.8
Medtr4g005800 Medicago truncatula HOM05D005491 ORTHO05D006973 5.0e-26 122.5 105 54.3
Cpa.g.c36201.2 Carica papaya HOM05D005491 ORTHO05D006973 2.1e-24 117.1 76 71.1
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 2.3e-23 113.6 73 69.9
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 8.3e-21 105.1 76 67.1
SEGI_08052 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 3.5e-19 99.8 87 51.7
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 4.4e-14 82.8 96 44.8
MCO13G019 Micromonas commoda HOM05D005491 ORTHO05D006973 3.2e-12 76.6 136 31.6
CBR_g22384 Chara braunii HOM05D005491 ORTHO05D006973 4.1e-12 76.3 76 47.4
Cre03.g156600 Chlamydomonas reinhardtii HOM05D005491 ORTHO05D006973 5.0e-10 69.3 115 33.9
PRCOL_00005430 Prasinoderma coloniale HOM05D005491 ORTHO05D006973 8.1e-08 62.0 108 33.3


User provided reference genes

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