Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.1e-116 421.4 212 100.0
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.7e-74 280.8 186 80.1
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 8.7e-66 254.2 185 71.4
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.3e-64 250.4 189 70.4
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 4.8e-56 221.9 281 48.0
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.7e-54 214.5 182 59.9
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.7e-54 214.5 182 59.9
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.7e-53 213.4 179 63.1
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 3.8e-53 212.2 174 62.6
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 6.5e-53 211.5 180 61.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.1e-52 210.7 183 60.1
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-52 210.3 183 59.6
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.4e-52 210.3 183 59.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.4e-52 210.3 172 64.0
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 3.2e-52 209.1 183 60.1
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 3.2e-52 209.1 184 59.8
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 5.5e-52 208.4 181 61.3
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.2e-51 207.2 178 63.5
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.6e-51 206.8 180 60.6
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.1e-51 206.5 180 60.6
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.1e-51 206.5 180 60.6
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.0e-50 204.1 186 60.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.0e-50 204.1 213 54.0
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.4e-50 203.8 184 59.8
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 2.5e-49 199.5 172 62.2
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 9.7e-49 197.6 179 58.7
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.3e-48 197.2 173 62.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 2.2e-48 196.4 169 62.1
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.8e-48 196.1 168 62.5
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.8e-48 196.1 171 59.6
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 3.7e-48 195.7 179 58.7
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.3e-48 194.9 180 59.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.2e-48 194.5 181 59.1
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-47 194.1 168 61.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.1e-47 194.1 181 59.1
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.4e-47 193.7 181 59.7
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.4e-47 193.7 181 56.9
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.4e-47 193.0 181 59.7
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.4e-47 193.0 182 60.4
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 2.4e-47 193.0 181 58.0
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.1e-47 192.6 181 58.6
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 3.1e-47 192.6 186 57.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 5.3e-47 191.8 179 57.0
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 5.3e-47 191.8 181 55.8
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 5.3e-47 191.8 179 58.7
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.2e-46 190.7 168 62.5
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.5e-46 190.3 185 54.1
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.6e-46 189.5 181 58.6
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.6e-46 189.5 184 56.0
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 2.6e-46 189.5 182 57.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 2.6e-46 189.5 179 56.4
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.2e-45 186.4 179 55.9
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 2.9e-45 186.0 168 56.5
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 2.9e-45 186.0 176 54.0
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 3.8e-45 185.7 164 58.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 6.5e-45 184.9 176 54.0
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 6.5e-45 184.9 179 55.3
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.1e-44 184.1 166 59.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.1e-44 184.1 181 56.9
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 2.5e-44 183.0 179 58.1
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 3.2e-44 182.6 179 53.6
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 5.5e-44 181.8 184 53.3
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 7.2e-44 181.4 179 57.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 6.1e-43 178.3 176 54.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 7.9e-43 177.9 174 58.0
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 7.9e-43 177.9 169 58.6
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.4e-42 177.2 195 51.8
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 6.7e-42 174.9 179 51.4
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.5e-41 173.7 179 52.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.5e-41 173.7 185 53.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.5e-41 173.7 183 55.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 5.7e-41 171.8 186 49.5
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 5.7e-41 171.8 173 53.2
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 7.4e-41 171.4 181 55.2
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.7e-40 170.2 186 49.5
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.2e-40 169.9 180 52.2
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.8e-40 169.5 212 46.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 3.7e-40 169.1 179 53.1
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.8e-40 168.7 183 50.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 8.2e-40 167.9 173 52.0
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.1e-39 167.5 212 45.8
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.1e-39 167.5 212 45.8
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.1e-39 167.5 212 45.8
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.4e-39 167.2 181 50.8
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.4e-39 167.2 176 52.8
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.4e-39 167.2 180 51.7
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 7.0e-39 164.9 182 51.6
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.6e-38 163.7 157 58.6
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.3e-37 160.6 184 46.7
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.5e-36 157.1 157 54.8
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.1e-35 153.3 160 56.2
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.7e-35 152.9 173 47.4
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 4.0e-34 149.1 181 47.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.1e-31 141.0 169 47.3
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.5e-29 131.7 97 68.0
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 2.0e-25 120.2 150 47.3
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.8e-23 113.6 77 72.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 7.0e-23 111.7 80 72.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.0e-21 107.8 180 37.8
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.5e-20 104.0 170 36.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 6.3e-16 88.6 178 34.3
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 8.3e-16 88.2 205 31.7
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 8.0e-11 71.6 43 79.1
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.7e-08 63.9 57 50.9
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 5.9e-06 55.5 175 26.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 5.9e-06 55.5 194 25.8


User provided reference genes

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