Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.2e-72 276.6 156 100.0
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 6.7e-47 191.0 131 85.5
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.3e-45 186.8 110 97.3
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.9e-42 175.6 111 91.0
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.4e-41 173.3 129 78.3
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 2.5e-41 172.6 111 86.5
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 3.2e-41 172.2 111 86.5
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 3.2e-41 172.2 111 86.5
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 3.2e-41 172.2 111 85.6
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 5.5e-41 171.4 110 85.5
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 7.1e-41 171.0 111 86.5
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 7.1e-41 171.0 111 86.5
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.2e-40 170.2 110 88.2
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 2.1e-40 169.5 119 84.0
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.0e-39 167.2 111 85.6
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 1.3e-39 166.8 111 81.1
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.3e-39 166.8 111 85.6
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.3e-39 166.8 111 85.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-39 166.8 111 84.7
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.3e-39 166.8 111 84.7
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 3.0e-39 165.6 111 81.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.0e-39 165.6 111 84.7
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.1e-39 164.9 111 84.7
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 5.1e-39 164.9 111 81.1
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.7e-39 164.1 111 83.8
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.7e-39 164.1 111 83.8
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 8.7e-39 164.1 120 79.2
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 1.5e-38 163.3 110 83.6
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 4.3e-38 161.8 110 82.7
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 5.7e-38 161.4 131 72.5
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 5.7e-38 161.4 114 82.5
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 7.4e-38 161.0 117 79.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 9.7e-38 160.6 114 77.2
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 9.7e-38 160.6 112 83.0
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 1.3e-37 160.2 112 80.4
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 1.6e-37 159.8 117 77.8
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.2e-37 159.5 112 82.1
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 2.8e-37 159.1 112 82.1
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 3.7e-37 158.7 111 82.0
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.7e-37 158.7 111 78.4
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 3.7e-37 158.7 99 92.9
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 3.7e-37 158.7 111 80.2
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 3.7e-37 158.7 112 82.1
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 4.8e-37 158.3 114 79.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 4.8e-37 158.3 114 78.9
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 6.3e-37 157.9 105 85.7
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 6.3e-37 157.9 109 82.6
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 8.2e-37 157.5 117 77.8
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.4e-36 156.8 113 78.8
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.4e-36 156.8 113 78.8
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.8e-36 156.4 113 79.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 2.4e-36 156.0 112 80.4
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 4.1e-36 155.2 113 78.8
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 5.3e-36 154.8 117 76.9
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 6.9e-36 154.5 110 79.1
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.5e-35 153.3 111 78.4
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 2.0e-35 152.9 112 78.6
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.4e-35 152.1 113 75.2
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 4.5e-35 151.8 110 77.3
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.5e-35 151.8 110 76.4
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 4.5e-35 151.8 110 77.3
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 5.9e-35 151.4 110 76.4
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 5.9e-35 151.4 106 78.3
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.0e-34 150.6 113 75.2
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.0e-34 150.6 110 76.4
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.3e-34 150.2 114 74.6
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.3e-34 150.2 111 76.6
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 1.7e-34 149.8 133 71.4
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.2e-34 149.4 110 75.5
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 2.9e-34 149.1 108 78.7
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.8e-34 148.7 110 74.5
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 3.8e-34 148.7 110 75.5
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 3.8e-34 148.7 111 74.8
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 5.0e-34 148.3 110 74.5
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.0e-34 148.3 110 75.5
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 5.0e-34 148.3 110 77.3
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 8.5e-34 147.5 110 74.5
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.1e-33 147.1 113 74.3
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.4e-33 146.7 110 75.5
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 1.9e-33 146.4 112 75.0
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.9e-33 146.4 106 75.5
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.9e-33 146.4 113 75.2
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 2.5e-33 146.0 110 73.6
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 2.5e-33 146.0 96 89.6
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.5e-33 146.0 113 74.3
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.2e-33 145.6 114 76.3
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 5.5e-33 144.8 106 76.4
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 5.5e-33 144.8 106 76.4
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.2e-32 143.7 111 68.5
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.1e-32 142.9 97 84.5
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 3.6e-32 142.1 110 71.8
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 4.6e-32 141.7 109 76.1
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.3e-31 139.4 109 71.6
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.3e-31 139.4 106 70.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 3.0e-31 139.0 91 86.8
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 8.8e-31 137.5 108 77.8
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 8.8e-31 137.5 106 71.7
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 2.5e-30 136.0 103 78.6
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 5.7e-30 134.8 108 68.5
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 9.7e-30 134.0 107 69.2
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.3e-29 133.7 103 68.9
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 2.8e-29 132.5 89 87.6
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 8.2e-29 131.0 97 77.3
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 5.3e-28 128.3 85 87.1
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 5.3e-28 128.3 101 68.3
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.0e-27 126.3 97 78.4
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 2.2e-26 122.9 110 64.5
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 5.0e-26 121.7 110 66.4
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 5.0e-26 121.7 145 55.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 6.5e-26 121.3 82 85.4
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.1e-25 120.6 111 65.8
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.4e-25 120.2 110 66.4
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.4e-25 120.2 96 75.0
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.4e-23 113.6 107 62.6
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 6.7e-23 111.3 111 57.7
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.1e-20 104.0 111 51.4
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 1.8e-20 103.2 66 87.9
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.0e-19 99.8 111 59.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 3.5e-19 99.0 104 50.0
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 1.7e-18 96.7 105 49.5
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.8e-13 78.6 55 78.2
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.0e-11 73.2 53 71.7
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 4.5e-11 72.0 46 80.4
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 5.0e-10 68.6 42 85.7
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 6.5e-10 68.2 45 82.2


User provided reference genes

Program Settings