Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10688 Corylus avellana HOM05D003737 ORTHO05D004640 8.8e-137 490.3 257 100.0
Haze_03384 Corylus avellana HOM05D003737 ORTHO05D004640 1.3e-42 177.6 127 77.2
Cfa010430 Carpinus fangiana HOM05D003737 ORTHO05D004640 2.1e-42 176.8 127 77.2
CiPaw.14G038200 Carya illinoinensis HOM05D003737 ORTHO05D004640 3.8e-23 112.8 129 53.5
Gorai.012G020700 Gossypium raimondii HOM05D003737 ORTHO05D004640 3.8e-23 112.8 145 44.8
TAR636G0393 Trochodendron aralioides HOM05D003737 ORTHO05D004640 3.8e-23 112.8 117 49.6
Gohir.D04G017900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 5.0e-23 112.5 145 44.8
Gohir.A05G398100 Gossypium hirsutum HOM05D003737 ORTHO05D004640 8.5e-23 111.7 126 50.8
Sabra10G0193400 Salix brachista HOM05D003737 ORTHO05D004640 1.1e-22 111.3 131 48.9
CiPaw.13G048500 Carya illinoinensis HOM05D003737 ORTHO05D004640 1.4e-22 110.9 140 49.3
Gorai.010G212200 Gossypium raimondii HOM05D003737 ORTHO05D004640 1.4e-22 110.9 150 44.0
Potri.010G247900 Populus trichocarpa HOM05D003737 ORTHO05D004640 1.4e-22 110.9 131 48.9
Hma1.2p1_0233F.1_g098040 Hydrangea macrophylla HOM05D003737 ORTHO05D004640 1.9e-22 110.5 129 48.8
TAR633G0465 Trochodendron aralioides HOM05D003737 ORTHO05D004640 1.9e-22 110.5 170 40.0
Gohir.A06G171900 Gossypium hirsutum HOM05D003737 ORTHO05D004640 2.5e-22 110.2 150 43.3
Gohir.D06G180700 Gossypium hirsutum HOM05D003737 ORTHO05D004640 2.5e-22 110.2 150 43.3
Glyma.13G185300 Glycine max HOM05D003737 ORTHO05D004640 4.2e-22 109.4 128 47.7
COL.COLO4_05028 Corchorus olitorius HOM05D003737 ORTHO05D004640 5.5e-22 109.0 145 49.0
VMungo0647G1094 Vigna mungo HOM05D003737 ORTHO05D004640 1.2e-21 107.8 125 50.4
Phvul.011G188500 Phaseolus vulgaris HOM05D003737 ORTHO05D004640 1.6e-21 107.5 125 49.6
Duzib128G0026 Durio zibethinus HOM05D003737 ORTHO05D004640 2.7e-21 106.7 150 42.7
Duzib128G0945 Durio zibethinus HOM05D003737 ORTHO05D004640 2.7e-21 106.7 150 42.7
Glyma.15G223100 Glycine max HOM05D003737 ORTHO05D004640 3.6e-21 106.3 125 47.2
Thecc.10G131100 Theobroma cacao HOM05D003737 ORTHO05D004640 3.6e-21 106.3 151 45.0
Lalb_Chr03g0032471 Lupinus albus HOM05D003737 ORTHO05D004640 4.6e-21 105.9 129 48.1
Duzib106G0442 Durio zibethinus HOM05D003737 ORTHO05D004640 7.9e-21 105.1 145 41.4
Potri.008G010900 Populus trichocarpa HOM05D003737 ORTHO05D004640 1.4e-20 104.4 117 52.1
QL93p0223_0017 Quercus lobata HOM05D003737 ORTHO05D004640 2.3e-20 103.6 124 51.6
CDE09G1399 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 3.0e-20 103.2 132 48.5
Manes.05G191000 Manihot esculenta HOM05D003737 ORTHO05D004640 3.0e-20 103.2 129 45.0
Lj3g0019804 Lotus japonicus HOM05D003737 ORTHO05D004640 5.1e-20 102.4 125 46.4
Prupe.2G056900 Prunus persica HOM05D003737 ORTHO05D004640 5.1e-20 102.4 123 46.3
QL04p051647 Quercus lobata HOM05D003737 ORTHO05D004640 6.7e-20 102.1 124 50.8
Lalb_Chr01g0007591 Lupinus albus HOM05D003737 ORTHO05D004640 2.0e-19 100.5 128 46.1
MD02G1266700 Malus domestica HOM05D003737 ORTHO05D004640 2.6e-19 100.1 125 47.2
Sabra08G0006600 Salix brachista HOM05D003737 ORTHO05D004640 2.6e-19 100.1 129 45.7
MD07G1053000 Malus domestica HOM05D003737 ORTHO05D004640 3.3e-19 99.8 134 44.0
TWI34G0525 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 3.3e-19 99.8 112 49.1
Medtr8g043510 Medicago truncatula HOM05D003737 ORTHO05D004640 4.4e-19 99.4 127 45.7
CDE08G0077 Ceratophyllum demersum HOM05D003737 ORTHO05D004640 5.7e-19 99.0 132 47.0
ClCG08G008580 Citrullus lanatus HOM05D003737 ORTHO05D004640 5.7e-19 99.0 125 47.2
Eucgr.J00319 Eucalyptus grandis HOM05D003737 ORTHO05D004640 5.7e-19 99.0 149 42.3
Lj9C660G5 Lonicera japonica HOM05D003737 ORTHO05D004640 1.3e-18 97.8 136 45.6
Ciclev10001582m.g Citrus clementina HOM05D003737 ORTHO05D004640 2.2e-18 97.1 127 43.3
PSO170G3077 Papaver somniferum HOM05D003737 ORTHO05D004640 2.8e-18 96.7 119 42.0
PSO675G8349 Papaver somniferum HOM05D003737 ORTHO05D004640 8.2e-18 95.1 122 45.9
Psat4g141920 Pisum sativum HOM05D003737 ORTHO05D004640 8.2e-18 95.1 125 48.0
MELO3C019928.2 Cucumis melo HOM05D003737 ORTHO05D004640 1.1e-17 94.7 125 44.8
PGR044G1985 Punica granatum HOM05D003737 ORTHO05D004640 1.4e-17 94.4 135 42.2
Ca_24114_v3 Cicer arietinum L. HOM05D003737 ORTHO05D004640 1.8e-17 94.0 129 43.4
CsaV3_6G004570 Cucumis sativus L. HOM05D003737 ORTHO05D004640 1.8e-17 94.0 125 44.8
MBI19_g24737_MAGBIO Magnolia biondii HOM05D003737 ORTHO05D004640 2.4e-17 93.6 123 39.8
PSO017G3614 Papaver somniferum HOM05D003737 ORTHO05D004640 2.4e-17 93.6 122 41.0
Sed0018433 Sechium edule HOM05D003737 ORTHO05D004640 2.4e-17 93.6 137 44.5
Dinv20457 Davidia involucrata HOM05D003737 ORTHO05D004640 4.1e-17 92.8 130 43.8
Sed0006452 Sechium edule HOM05D003737 ORTHO05D004640 4.1e-17 92.8 128 42.2
Actinidia12270 Actinidia chinensis HOM05D003737 ORTHO05D004640 6.9e-17 92.0 134 43.3
Atru.chr12.1119 Acer truncatum HOM05D003737 ORTHO05D004640 9.1e-17 91.7 148 37.8
Actinidia31420 Actinidia chinensis HOM05D003737 ORTHO05D004640 9.1e-17 91.7 135 43.0
TWI32G0890 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 9.1e-17 91.7 124 45.2
CSS0038854 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 1.2e-16 91.3 130 44.6
CSS0046027 Camellia sinensis var. sinensis HOM05D003737 ORTHO05D004640 1.2e-16 91.3 130 44.6
Cpa.g.sc33.135 Carica papaya HOM05D003737 ORTHO05D004640 2.0e-16 90.5 119 45.4
Sc09g0004980 Simmondsia chinensis HOM05D003737 ORTHO05D004640 7.7e-16 88.6 126 42.1
vmacro13791 Vaccinium macrocarpon HOM05D003737 ORTHO05D004640 7.7e-16 88.6 118 46.6
EL10Ac4g08805 Beta vulgaris HOM05D003737 ORTHO05D004640 8.5e-15 85.1 132 38.6
CANSAT56G0630 Cannabis sativa HOM05D003737 ORTHO05D004640 8.5e-15 85.1 130 40.8
PSO782G4010 Papaver somniferum HOM05D003737 ORTHO05D004640 1.1e-14 84.7 123 39.0
Hund06832 Selenicereus undatus HOM05D003737 ORTHO05D004640 1.1e-14 84.7 132 35.6
PSO170G6472 Papaver somniferum HOM05D003737 ORTHO05D004640 2.5e-14 83.6 123 38.2
Peaxi162Scf00220g00010 Petunia axillaris HOM05D003737 ORTHO05D004640 2.5e-14 83.6 123 41.5
Oeu013042.2 Olea europaea HOM05D003737 ORTHO05D004640 9.4e-14 81.6 127 41.7
CANSAT78G1307 Cannabis sativa HOM05D003737 ORTHO05D004640 1.2e-13 81.3 117 43.6
Migut.B01171 Erythranthe guttata HOM05D003737 ORTHO05D004640 6.1e-13 79.0 123 37.4
Aqoxy2G00024 Aquilegia oxysepala HOM05D003737 ORTHO05D004640 7.9e-13 78.6 143 33.6
AUR62041279 Chenopodium quinoa HOM05D003737 ORTHO05D004640 7.9e-13 78.6 125 40.0
ATR0307G049 Amborella trichopoda HOM05D003737 ORTHO05D004640 1.8e-12 77.4 105 42.9
Ah.04g162720 Amaranthus hybridus HOM05D000296 ORTHO05D000175 5.2e-12 75.9 118 37.3
Lsat_1_v5_gn_7_65181 Lactuca sativa HOM05D003737 ORTHO05D004640 5.2e-12 75.9 112 40.2
TPR.G25035 Trifolium pratense HOM05D003737 ORTHO05D004640 6.7e-12 75.5 107 42.1
Nn6g33270 Nelumbo nucifera HOM05D003737 ORTHO05D004640 1.1e-11 74.7 131 37.4
PGSC0003DMG402027528 Solanum tuberosum HOM05D003737 ORTHO05D004640 1.5e-11 74.3 126 35.7
ECA240G2259 Erigeron canadensis HOM05D003737 ORTHO05D004640 3.3e-11 73.2 144 37.5
BraA05t22639Z Brassica rapa HOM05D003737 ORTHO05D004640 7.4e-11 72.0 133 36.1
Solyc01g096780.4 Solanum lycopersicum HOM05D003737 ORTHO05D004640 9.7e-11 71.6 126 34.9
Rhsim07G0072700 Rhododendron simsii HOM05D003737 ORTHO05D004640 1.3e-10 71.2 137 38.0
SHI21216 Sapria himalayana HOM05D003737 ORTHO05D004640 1.7e-10 70.9 126 35.7
C05p57390 Brassica napus HOM05D005327 ORTHO05D006655 2.2e-10 70.5 133 35.3
Sopen01g040480 Solanum pennellii HOM05D003737 ORTHO05D004640 2.8e-10 70.1 126 34.1
BolC5t34394H Brassica oleracea HOM05D003737 ORTHO05D004640 3.7e-10 69.7 133 35.3
Thhalv10020697m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 3.7e-10 69.7 132 35.6
Aa31LG3G3660 Aethionema arabicum HOM05D003737 ORTHO05D004640 4.8e-10 69.3 131 35.9
RcHm_v2.0_Chr1g0330551 Rosa chinensis HOM05D003737 ORTHO05D004640 6.3e-10 68.9 117 36.8
TWI63G1132 Tripterygium wilfordii HOM05D003737 ORTHO05D004640 1.4e-09 67.8 124 37.9
HPP92_021189 Vanilla planifolia HOM05D003737 ORTHO05D004640 1.4e-09 67.8 134 32.1
A05p38490 Brassica napus HOM05D005327 ORTHO05D006655 1.8e-09 67.4 160 33.1
Carub.0003s0996 Capsella rubella HOM05D003737 ORTHO05D004640 2.4e-09 67.0 132 34.1
HanXRQChr03g0073711 Helianthus annuus HOM05D003737 ORTHO05D004640 2.4e-09 67.0 117 36.8
CARHR085310 Cardamine hirsuta HOM05D003737 ORTHO05D004640 4.1e-09 66.2 132 34.8
AT3G10730 Arabidopsis thaliana HOM05D003737 ORTHO05D004640 5.3e-09 65.9 131 32.8
AL3G22200 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 7.0e-09 65.5 131 33.6
FvH4_7g04870 Fragaria vesca HOM05D003737 ORTHO05D004640 1.2e-08 64.7 117 37.6
MSTRG.20485 Avicennia marina HOM05D003737 ORTHO05D004640 1.6e-08 64.3 119 36.1
Nitab4.5_0004903g0010 Nicotiana tabacum HOM05D003737 ORTHO05D004640 2.0e-08 63.9 113 35.4
FAN06G1525 Fragaria x ananassa HOM05D003737 ORTHO05D004640 2.6e-08 63.5 117 37.6
FAN10G1609 Fragaria x ananassa HOM05D003737 ORTHO05D004640 2.6e-08 63.5 117 37.6
SGA_v2.0_scaffold182G39819 Striga asiatica HOM05D003737 ORTHO05D004640 2.6e-08 63.5 124 33.1
Nitab4.5_0002687g0030 Nicotiana tabacum HOM05D003737 ORTHO05D004640 3.5e-08 63.2 101 35.6
FAN03G1506 Fragaria x ananassa HOM05D003737 ORTHO05D004640 5.9e-08 62.4 117 37.6
Os01g0267600 Oryza sativa ssp. japonica HOM05D003737 ORTHO05D004640 7.7e-08 62.0 130 32.3
THA.LOC104823158 Tarenaya hassleriana HOM05D003737 ORTHO05D004640 1.0e-07 61.6 92 39.1
SGA_v2.0_scaffold309G48158 Striga asiatica HOM05D003737 ORTHO05D004640 1.7e-07 60.8 129 30.2
C09p71760 Brassica napus HOM05D003737 ORTHO05D004081 2.9e-07 60.1 122 35.2
BcaC06g32214 Brassica carinata HOM05D003737 ORTHO05D004640 3.8e-07 59.7 123 35.0
RcHm_v2.0_Chr1g0324281 Rosa chinensis HOM05D003737 ORTHO05D004640 3.8e-07 59.7 122 33.6
SEGI_05544 Sequoiadendron giganteum HOM05D003737 ORTHO05D004640 3.8e-07 59.7 116 31.9
BolC9t59927H Brassica oleracea HOM05D003737 ORTHO05D004081 5.0e-07 59.3 122 34.4
Thhalv10013430m.g Eutrema salsugineum HOM05D003737 ORTHO05D004640 5.0e-07 59.3 125 32.8
BcaC06g32213 Brassica carinata HOM05D003737 ORTHO05D004640 1.1e-06 58.2 102 37.3
Lsat_1_v5_gn_1_105000 Lactuca sativa HOM05D003737 ORTHO05D004640 2.5e-06 57.0 151 31.1
AL532U10020 Arabidopsis lyrata HOM05D003737 ORTHO05D004640 3.2e-06 56.6 98 37.8
A10p31150 Brassica napus HOM05D003737 ORTHO05D004081 5.5e-06 55.8 123 34.1
BraA10t45159Z Brassica rapa HOM05D003737 ORTHO05D004081 5.5e-06 55.8 123 34.1
unitig_26.g9749 Utricularia gibba HOM05D003737 ORTHO05D004640 7.2e-06 55.5 122 27.0
Aa31LG11G5690 Aethionema arabicum HOM05D003737 ORTHO05D004640 9.4e-06 55.1 126 33.3


User provided reference genes

Program Settings