Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 2.5e-40 168.3 83 100.0
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 3.3e-37 157.9 87 93.1
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 5.7e-37 157.1 83 94.0
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 1.7e-33 145.6 87 87.4
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 1.6e-26 122.5 70 90.0
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 1.6e-26 122.5 70 90.0
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 5.9e-26 120.6 70 88.6
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 1.7e-25 119.0 71 85.9
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 6.1e-23 110.5 70 81.4
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 6.1e-23 110.5 70 81.4
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 2.3e-22 108.6 64 82.8
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 5.2e-22 107.5 63 82.5
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 6.7e-22 107.1 73 78.1
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 6.7e-22 107.1 71 73.2
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 8.8e-22 106.7 67 79.1
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 1.5e-21 105.9 65 81.5
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 2.6e-21 105.1 64 81.2
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 2.6e-21 105.1 64 81.2
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.3e-21 104.8 67 77.6
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.3e-21 104.8 67 77.6
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.3e-21 104.8 67 77.6
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 3.3e-21 104.8 75 68.0
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.3e-21 104.8 65 80.0
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.3e-21 104.8 72 73.6
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 3.3e-21 104.8 71 74.6
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.4e-21 104.4 67 76.1
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 5.7e-21 104.0 64 81.2
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 7.5e-21 103.6 64 81.2
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 7.5e-21 103.6 67 77.6
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 7.5e-21 103.6 62 82.3
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 7.5e-21 103.6 64 76.6
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 9.7e-21 103.2 65 76.9
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 9.7e-21 103.2 68 79.4
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 9.7e-21 103.2 67 76.1
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 9.7e-21 103.2 67 77.6
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.3e-20 102.8 67 76.1
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 1.3e-20 102.8 64 79.7
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 1.7e-20 102.4 63 77.8
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.7e-20 102.4 67 76.1
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.7e-20 102.4 67 76.1
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 2.2e-20 102.1 66 77.3
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 2.2e-20 102.1 74 71.6
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 2.2e-20 102.1 67 74.6
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 2.2e-20 102.1 64 79.7
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 2.8e-20 101.7 63 81.0
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 2.8e-20 101.7 64 78.1
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 2.8e-20 101.7 69 71.0
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 2.8e-20 101.7 62 80.6
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 3.7e-20 101.3 64 76.6
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 3.7e-20 101.3 73 72.6
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 4.8e-20 100.9 64 75.0
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.8e-20 100.9 64 78.1
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 4.8e-20 100.9 64 78.1
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 4.8e-20 100.9 66 75.8
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 4.8e-20 100.9 72 75.0
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 4.8e-20 100.9 63 79.4
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 6.3e-20 100.5 66 75.8
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 6.3e-20 100.5 66 75.8
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 6.3e-20 100.5 61 80.3
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 6.3e-20 100.5 61 82.0
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 8.2e-20 100.1 66 75.8
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 8.2e-20 100.1 63 77.8
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 8.2e-20 100.1 63 77.8
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 1.1e-19 99.8 64 78.1
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 1.1e-19 99.8 67 71.6
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 1.1e-19 99.8 64 78.1
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 1.4e-19 99.4 65 73.8
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 1.4e-19 99.4 61 80.3
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 1.4e-19 99.4 61 80.3
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 1.4e-19 99.4 66 71.2
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 1.4e-19 99.4 64 76.6
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 1.8e-19 99.0 64 73.4
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 1.8e-19 99.0 62 79.0
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 1.8e-19 99.0 64 76.6
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 1.8e-19 99.0 61 78.7
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 2.4e-19 98.6 69 72.5
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 2.4e-19 98.6 67 71.6
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 2.4e-19 98.6 69 71.0
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 3.1e-19 98.2 66 74.2
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 3.1e-19 98.2 63 76.2
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 3.1e-19 98.2 66 68.2
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 4.1e-19 97.8 61 75.4
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 5.3e-19 97.4 61 77.0
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 7.0e-19 97.1 66 72.7
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 7.0e-19 97.1 66 72.7
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 9.1e-19 96.7 67 70.1
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 1.2e-18 96.3 66 69.7
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 1.2e-18 96.3 64 71.9
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 1.2e-18 96.3 66 71.2
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 1.2e-18 96.3 72 70.8
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 1.6e-18 95.9 61 75.4
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.6e-18 95.9 61 75.4
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 1.6e-18 95.9 67 71.6
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 2.0e-18 95.5 66 69.7
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 2.0e-18 95.5 63 74.6
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 2.7e-18 95.1 66 69.7
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 2.7e-18 95.1 66 69.7
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 2.7e-18 95.1 66 69.7
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 2.7e-18 95.1 66 69.7
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 2.7e-18 95.1 73 69.9
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 3.5e-18 94.7 62 75.8
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 5.9e-18 94.0 64 71.9
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 5.9e-18 94.0 67 68.7
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 7.7e-18 93.6 67 68.7
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 1.7e-17 92.4 79 62.0
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 1.7e-17 92.4 64 70.3
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 2.2e-17 92.0 66 69.7
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 2.9e-17 91.7 66 69.7
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 2.9e-17 91.7 67 67.2
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.8e-17 91.3 60 75.0
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 5.0e-17 90.9 66 69.7
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 5.0e-17 90.9 66 68.2
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 5.0e-17 90.9 66 68.2
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 5.0e-17 90.9 66 68.2
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 5.0e-17 90.9 66 68.2
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 1.9e-16 89.0 66 68.2
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 2.1e-15 85.5 98 49.0
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 2.8e-12 75.1 47 72.3
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 8.3e-12 73.6 63 57.1
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 8.3e-12 73.6 38 81.6
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 1.1e-11 73.2 49 73.5
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 1.8e-11 72.4 37 78.4
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 9.1e-11 70.1 79 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 8.5e-09 63.5 60 51.7
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 1.1e-08 63.2 35 71.4
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 1.1e-08 63.2 35 71.4
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 1.1e-08 63.2 35 71.4
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 3.2e-08 61.6 46 58.7
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 3.2e-08 61.6 46 58.7
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 5.5e-08 60.8 47 59.6
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 7.2e-08 60.5 47 59.6
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 2.7e-07 58.5 36 61.1
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 8.0e-07 57.0 55 50.9
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.0e-06 56.6 38 81.6
SalBow5G0226 Salvia bowleyana HOM05D005881 ORTHO05D007298 1.4e-06 56.2 60 45.0


User provided reference genes

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