Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10415 Corylus avellana HOM05D002007 ORTHO05D000355 5.9e-97 357.5 172 100.0
Haze_10410 Corylus avellana HOM05D002007 ORTHO05D000355 5.4e-66 254.6 201 71.1
Haze_10416 Corylus avellana HOM05D002007 ORTHO05D000355 3.7e-46 188.7 127 74.8
Haze_10403 Corylus avellana HOM05D057700 ORTHO05D000355 5.8e-36 154.8 83 89.2
Haze_10405 Corylus avellana HOM05D002007 ORTHO05D000355 3.3e-31 139.0 131 58.0
Haze_14233 Corylus avellana HOM05D002007 ORTHO05D000355 1.3e-30 137.1 127 59.1
Dinv19018 Davidia involucrata HOM05D002007 ORTHO05D000355 1.1e-29 134.0 127 55.9
Ciclev10011615m.g Citrus clementina HOM05D002007 ORTHO05D000355 1.9e-26 123.2 125 52.0
CSS0003415 Camellia sinensis var. sinensis HOM05D002007 ORTHO05D000355 1.2e-25 120.6 127 47.2
CiPaw.03G069400 Carya illinoinensis HOM05D002007 ORTHO05D000355 1.2e-25 120.6 127 52.0
Prupe.3G160100 Prunus persica HOM05D002007 ORTHO05D000355 1.6e-25 120.2 127 47.2
Cfa007832 Carpinus fangiana HOM05D002007 ORTHO05D000355 4.6e-25 118.6 61 90.2
Atru.chr1.1841 Acer truncatum HOM05D002007 ORTHO05D000355 6.1e-25 118.2 127 48.0
MD17G1257200 Malus domestica HOM05D002007 ORTHO05D000355 6.1e-25 118.2 127 48.8
Cpa.g.sc116.29 Carica papaya HOM05D002007 ORTHO05D000355 5.1e-24 115.2 127 46.5
FAN10G3398 Fragaria x ananassa HOM05D002007 ORTHO05D000355 8.7e-24 114.4 127 45.7
FAN10G4320 Fragaria x ananassa HOM05D002007 ORTHO05D000355 8.7e-24 114.4 127 45.7
QL11p003913 Quercus lobata HOM05D002007 ORTHO05D000355 8.7e-24 114.4 133 47.4
EL10Ac2g04472 Beta vulgaris HOM05D002007 ORTHO05D000355 1.9e-23 113.2 127 45.7
PGR042G0958 Punica granatum HOM05D002007 ORTHO05D000355 3.3e-23 112.5 127 42.5
COL.COLO4_15732 Corchorus olitorius HOM05D002007 ORTHO05D000355 4.3e-23 112.1 127 45.7
FvH4_7g03480 Fragaria vesca HOM05D002007 ORTHO05D000355 4.3e-23 112.1 127 44.9
Duzib133G0117 Durio zibethinus HOM05D002007 ORTHO05D000355 5.7e-23 111.7 127 46.5
FAN03G1132 Fragaria x ananassa HOM05D002007 ORTHO05D000355 1.3e-22 110.5 127 44.9
Gohir.A05G212100 Gossypium hirsutum HOM05D002007 ORTHO05D000355 1.3e-22 110.5 127 44.1
Eucgr.J01548 Eucalyptus grandis HOM05D002007 ORTHO05D000355 1.7e-22 110.2 127 42.5
Lalb_Chr15g0084821 Lupinus albus HOM05D002007 ORTHO05D000355 2.2e-22 109.8 127 46.5
Nn4g24181 Nelumbo nucifera HOM05D002007 ORTHO05D000355 2.8e-22 109.4 127 45.7
CsaV3_5G024040 Cucumis sativus L. HOM05D002007 ORTHO05D000355 3.7e-22 109.0 129 43.4
AUR62023183 Chenopodium quinoa HOM05D002007 ORTHO05D000355 1.8e-21 106.7 127 44.1
AUR62023230 Chenopodium quinoa HOM05D002007 ORTHO05D000355 1.8e-21 106.7 127 43.3
ClCG03G008670 Citrullus lanatus HOM05D002007 ORTHO05D000355 2.4e-21 106.3 129 42.6
Ah.10g038020 Amaranthus hybridus HOM05D002007 ORTHO05D000355 4.1e-21 105.5 127 44.1
Sc11g0008660 Simmondsia chinensis HOM05D002007 ORTHO05D000355 4.1e-21 105.5 127 40.9
Actinidia22791 Actinidia chinensis HOM05D002007 ORTHO05D000355 1.5e-20 103.6 127 44.9
Rhsim08G0086500 Rhododendron simsii HOM05D002007 ORTHO05D000355 3.4e-20 102.4 141 41.8
Oeu047413.1 Olea europaea HOM05D002007 ORTHO05D000355 1.7e-19 100.1 127 40.9
Psat5g122600 Pisum sativum HOM05D002007 ORTHO05D000355 2.2e-19 99.8 127 40.9
SalBow3G3257 Salvia bowleyana HOM05D002007 ORTHO05D000355 5.0e-19 98.6 127 40.9
TPR.G2559 Trifolium pratense HOM05D002007 ORTHO05D000355 6.5e-19 98.2 127 40.2
Medtr3g067670 Medicago truncatula HOM05D002007 ORTHO05D000355 1.4e-18 97.1 127 40.9
Phvul.001G231300 Phaseolus vulgaris HOM05D002007 ORTHO05D000355 1.4e-18 97.1 129 41.9
Ca_08161_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 2.5e-18 96.3 127 39.4
Ca_17107_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 2.5e-18 96.3 127 39.4
Aqoxy3G00112 Aquilegia oxysepala HOM05D002007 ORTHO05D000355 3.2e-18 95.9 127 40.9
DCAR_010740 Daucus carota HOM05D002007 ORTHO05D000355 3.2e-18 95.9 127 40.2
Glyma.18G039300 Glycine max HOM05D002007 ORTHO05D000355 3.2e-18 95.9 127 42.5
SGA_v2.0_scaffold149G36498 Striga asiatica HOM05D002007 ORTHO05D000355 5.5e-18 95.1 127 40.2
Migut.H00273 Erythranthe guttata HOM05D002007 ORTHO05D000355 1.2e-17 94.0 127 37.8
Sed0014203 Sechium edule HOM05D002007 ORTHO05D000355 3.6e-17 92.4 129 38.0
VMungo1383G1228 Vigna mungo HOM05D002007 ORTHO05D000355 3.6e-17 92.4 129 40.3
MSTRG.2783 Avicennia marina HOM05D002007 ORTHO05D000355 7.9e-17 91.3 127 37.8
Glyma.11G217500 Glycine max HOM05D002007 ORTHO05D000355 1.8e-16 90.1 127 40.9
Lj6g0020415 Lotus japonicus HOM05D002007 ORTHO05D000355 2.3e-16 89.7 128 35.9
ECA238G3809 Erigeron canadensis HOM05D002007 ORTHO05D000355 3.9e-16 89.0 127 39.4
TPR.G32438 Trifolium pratense HOM05D002007 ORTHO05D000355 3.9e-16 89.0 128 37.5
CDE03G0080 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 5.1e-16 88.6 128 39.1
FAN06G1835 Fragaria x ananassa HOM05D002007 ORTHO05D000355 2.6e-15 86.3 112 41.1
Lsat_1_v5_gn_2_79961 Lactuca sativa HOM05D002007 ORTHO05D000355 4.4e-15 85.5 176 30.7
TAR371G1089 Trochodendron aralioides HOM05D002007 ORTHO05D000355 4.8e-14 82.0 127 37.0
Os02g0711100 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 6.3e-14 81.6 127 34.6
MELO3C022847.2 Cucumis melo HOM05D002007 ORTHO05D000355 1.1e-13 80.9 129 35.7
Gorai.009G222100 Gossypium raimondii HOM05D002007 ORTHO05D000355 1.4e-13 80.5 127 35.4
Sed0011706 Sechium edule HOM05D002007 ORTHO05D000355 1.8e-13 80.1 123 39.0
CDE04G2530 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 5.3e-13 78.6 107 38.3
Gohir.D05G215400 Gossypium hirsutum HOM05D002007 ORTHO05D000355 6.9e-13 78.2 127 34.6
HanXRQChr14g0440351 Helianthus annuus HOM05D002007 ORTHO05D000355 6.9e-13 78.2 127 35.4
Thecc.04G119300 Theobroma cacao HOM05D002007 ORTHO05D000355 1.2e-12 77.4 127 36.2
MD09G1262300 Malus domestica HOM05D002007 ORTHO05D000355 2.6e-12 76.3 61 59.0
Oeu000908.1 Olea europaea HOM05D002007 ORTHO05D000355 2.9e-11 72.8 61 55.7
RcHm_v2.0_Chr3g0493421 Rosa chinensis HOM05D002007 ORTHO05D000355 2.9e-11 72.8 91 45.1
Potri.017G126600 Populus trichocarpa HOM05D002007 ORTHO05D000355 3.8e-11 72.4 127 32.3
Hma1.2p1_0832F.1_g225550 Hydrangea macrophylla HOM05D002007 ORTHO05D000355 5.0e-11 72.0 61 59.0
Sabra17G0106500 Salix brachista HOM05D002007 ORTHO05D000355 5.0e-11 72.0 127 33.1
Dinv14885 Davidia involucrata HOM05D002007 ORTHO05D000355 8.5e-11 71.2 94 45.7
Lj2P434T45 Lonicera japonica HOM05D002007 ORTHO05D000355 3.2e-10 69.3 61 54.1
Manes.01G116200 Manihot esculenta HOM05D002007 ORTHO05D000355 3.2e-10 69.3 127 32.3
Os04g0520900 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 5.5e-10 68.6 122 33.6
TPR.G32446 Trifolium pratense HOM05D002007 ORTHO05D000355 1.6e-09 67.0 122 30.3
HPP92_014382 Vanilla planifolia HOM05D002007 ORTHO05D000355 1.4e-08 63.9 127 30.7
Zm00001eb077140 Zea mays HOM05D002007 ORTHO05D000355 2.3e-08 63.2 127 31.5
Zm00001eb364250 Zea mays HOM05D002007 ORTHO05D000355 3.9e-08 62.4 127 30.7
GSVIVG01030842001 Vitis vinifera HOM05D002007 ORTHO05D000355 6.7e-08 61.6 61 42.6
Actinidia17226 Actinidia chinensis HOM05D002007 ORTHO05D000355 1.1e-07 60.8 127 31.5


User provided reference genes

Program Settings