Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10410 Corylus avellana HOM05D002007 ORTHO05D000355 2.2e-218 761.9 369 100.0
Haze_10415 Corylus avellana HOM05D002007 ORTHO05D000355 3.1e-66 256.5 201 71.1
Haze_10416 Corylus avellana HOM05D002007 ORTHO05D000355 3.4e-49 199.9 127 78.7
Dinv19018 Davidia involucrata HOM05D002007 ORTHO05D000355 3.0e-37 160.2 129 63.6
Haze_10403 Corylus avellana HOM05D057700 ORTHO05D000355 9.0e-34 148.7 80 90.0
Prupe.3G160100 Prunus persica HOM05D002007 ORTHO05D000355 3.8e-32 143.3 129 53.5
CSS0003415 Camellia sinensis var. sinensis HOM05D002007 ORTHO05D000355 1.4e-31 141.4 129 52.7
FAN10G3398 Fragaria x ananassa HOM05D002007 ORTHO05D000355 5.4e-31 139.4 129 52.7
FAN10G4320 Fragaria x ananassa HOM05D002007 ORTHO05D000355 5.4e-31 139.4 129 52.7
Atru.chr1.1841 Acer truncatum HOM05D002007 ORTHO05D000355 7.1e-31 139.0 129 54.3
MD17G1257200 Malus domestica HOM05D002007 ORTHO05D000355 7.1e-31 139.0 129 53.5
Cpa.g.sc116.29 Carica papaya HOM05D002007 ORTHO05D000355 2.7e-30 137.1 218 37.6
Ciclev10011615m.g Citrus clementina HOM05D002007 ORTHO05D000355 3.5e-30 136.7 125 55.2
FvH4_7g03480 Fragaria vesca HOM05D002007 ORTHO05D000355 6.0e-30 136.0 129 51.9
FAN03G1132 Fragaria x ananassa HOM05D002007 ORTHO05D000355 7.9e-30 135.6 129 51.9
CsaV3_5G024040 Cucumis sativus L. HOM05D002007 ORTHO05D000355 1.3e-29 134.8 215 36.7
AUR62023183 Chenopodium quinoa HOM05D002007 ORTHO05D000355 2.3e-29 134.0 129 52.7
AUR62023230 Chenopodium quinoa HOM05D002007 ORTHO05D000355 2.3e-29 134.0 129 51.9
Haze_14233 Corylus avellana HOM05D002007 ORTHO05D000355 3.0e-29 133.7 229 39.7
Haze_10405 Corylus avellana HOM05D002007 ORTHO05D000355 8.7e-29 132.1 169 46.7
EL10Ac2g04472 Beta vulgaris HOM05D002007 ORTHO05D000355 1.5e-28 131.3 129 51.9
Eucgr.J01548 Eucalyptus grandis HOM05D002007 ORTHO05D000355 2.5e-28 130.6 129 47.3
Rhsim08G0086500 Rhododendron simsii HOM05D002007 ORTHO05D000355 2.5e-28 130.6 129 51.2
ClCG03G008670 Citrullus lanatus HOM05D002007 ORTHO05D000355 4.3e-28 129.8 128 48.4
COL.COLO4_15732 Corchorus olitorius HOM05D002007 ORTHO05D000355 4.3e-28 129.8 129 48.8
QL11p003913 Quercus lobata HOM05D002007 ORTHO05D000355 4.3e-28 129.8 135 51.9
Ah.10g038020 Amaranthus hybridus HOM05D002007 ORTHO05D000355 5.6e-28 129.4 128 50.0
Lalb_Chr15g0084821 Lupinus albus HOM05D002007 ORTHO05D000355 9.6e-28 128.6 129 48.8
PGR042G0958 Punica granatum HOM05D002007 ORTHO05D000355 1.3e-27 128.3 129 46.5
Sc11g0008660 Simmondsia chinensis HOM05D002007 ORTHO05D000355 1.6e-27 127.9 129 49.6
Ca_08161_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 6.2e-27 125.9 129 46.5
Ca_17107_v3 Cicer arietinum L. HOM05D002007 ORTHO05D000355 6.2e-27 125.9 129 46.5
FAN06G1835 Fragaria x ananassa HOM05D002007 ORTHO05D000355 1.4e-26 124.8 120 50.8
Psat5g122600 Pisum sativum HOM05D002007 ORTHO05D000355 2.4e-26 124.0 129 46.5
Glyma.18G039300 Glycine max HOM05D002007 ORTHO05D000355 4.0e-26 123.2 129 48.1
Duzib133G0117 Durio zibethinus HOM05D002007 ORTHO05D000355 6.9e-26 122.5 129 48.8
Gohir.A05G212100 Gossypium hirsutum HOM05D002007 ORTHO05D000355 6.9e-26 122.5 129 46.5
Sed0014203 Sechium edule HOM05D002007 ORTHO05D000355 6.9e-26 122.5 220 32.3
DCAR_010740 Daucus carota HOM05D002007 ORTHO05D000355 9.0e-26 122.1 129 48.1
Medtr3g067670 Medicago truncatula HOM05D002007 ORTHO05D000355 2.6e-25 120.6 129 46.5
Lj6g0020415 Lotus japonicus HOM05D002007 ORTHO05D000355 5.8e-25 119.4 130 43.1
TPR.G2559 Trifolium pratense HOM05D002007 ORTHO05D000355 1.3e-24 118.2 129 45.0
Phvul.001G231300 Phaseolus vulgaris HOM05D002007 ORTHO05D000355 2.2e-24 117.5 131 46.6
Actinidia22791 Actinidia chinensis HOM05D002007 ORTHO05D000355 4.9e-24 116.3 129 47.3
Glyma.11G217500 Glycine max HOM05D002007 ORTHO05D000355 6.5e-24 115.9 129 46.5
Migut.H00273 Erythranthe guttata HOM05D002007 ORTHO05D000355 8.4e-24 115.5 129 44.2
SGA_v2.0_scaffold149G36498 Striga asiatica HOM05D002007 ORTHO05D000355 8.4e-24 115.5 127 46.5
SalBow3G3257 Salvia bowleyana HOM05D002007 ORTHO05D000355 1.9e-23 114.4 129 45.7
MSTRG.2783 Avicennia marina HOM05D002007 ORTHO05D000355 2.5e-23 114.0 129 45.0
CiPaw.03G069400 Carya illinoinensis HOM05D002007 ORTHO05D000355 5.5e-23 112.8 129 48.8
VMungo1383G1228 Vigna mungo HOM05D002007 ORTHO05D000355 2.7e-22 110.5 131 44.3
HanXRQChr14g0440351 Helianthus annuus HOM05D002007 ORTHO05D000355 3.5e-22 110.2 129 43.4
Aqoxy3G00112 Aquilegia oxysepala HOM05D002007 ORTHO05D000355 4.6e-22 109.8 129 45.0
MELO3C022847.2 Cucumis melo HOM05D002007 ORTHO05D000355 4.6e-22 109.8 215 32.6
Cfa007832 Carpinus fangiana HOM05D002007 ORTHO05D000355 6.0e-22 109.4 69 78.3
TPR.G32438 Trifolium pratense HOM05D002007 ORTHO05D000355 7.9e-22 109.0 129 41.1
Oeu047413.1 Olea europaea HOM05D002007 ORTHO05D000355 5.1e-21 106.3 129 43.4
Nn4g24181 Nelumbo nucifera HOM05D002007 ORTHO05D000355 8.7e-21 105.5 219 32.0
CDE03G0080 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 1.9e-20 104.4 129 43.4
CDE04G2530 Ceratophyllum demersum HOM05D002007 ORTHO05D000355 1.9e-20 104.4 107 47.7
Os02g0711100 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 1.9e-20 104.4 270 31.1
ECA238G3809 Erigeron canadensis HOM05D002007 ORTHO05D000355 2.1e-19 100.9 129 41.1
Sed0011706 Sechium edule HOM05D002007 ORTHO05D000355 2.1e-19 100.9 117 44.4
Dinv14885 Davidia involucrata HOM05D002007 ORTHO05D000355 6.9e-18 95.9 75 64.0
RcHm_v2.0_Chr3g0493421 Rosa chinensis HOM05D002007 ORTHO05D000355 7.6e-17 92.4 91 53.8
Lsat_1_v5_gn_2_79961 Lactuca sativa HOM05D002007 ORTHO05D000355 3.8e-16 90.1 129 37.2
HPP92_014382 Vanilla planifolia HOM05D002007 ORTHO05D000355 2.5e-15 87.4 129 37.2
TPR.G32446 Trifolium pratense HOM05D002007 ORTHO05D000355 5.5e-15 86.3 122 36.9
Potri.017G126600 Populus trichocarpa HOM05D002007 ORTHO05D000355 1.0e-13 82.0 129 36.4
Os04g0520900 Oryza sativa ssp. japonica HOM05D002007 ORTHO05D000355 3.0e-13 80.5 124 37.1
Sabra17G0106500 Salix brachista HOM05D002007 ORTHO05D000355 2.5e-12 77.4 129 34.9
TAR371G1089 Trochodendron aralioides HOM05D002007 ORTHO05D000355 1.3e-11 75.1 129 35.7
Gorai.009G222100 Gossypium raimondii HOM05D002007 ORTHO05D000355 1.6e-11 74.7 129 33.3
Manes.01G116200 Manihot esculenta HOM05D002007 ORTHO05D000355 2.2e-11 74.3 129 34.1
Zm00001eb364250 Zea mays HOM05D002007 ORTHO05D000355 2.2e-11 74.3 184 31.0
Hma1.2p1_0832F.1_g225550 Hydrangea macrophylla HOM05D002007 ORTHO05D000355 2.8e-11 73.9 65 60.0
Thecc.04G119300 Theobroma cacao HOM05D002007 ORTHO05D000355 4.8e-11 73.2 67 55.2
Zm00001eb077140 Zea mays HOM05D002007 ORTHO05D000355 6.3e-11 72.8 129 34.1
Gohir.D05G215400 Gossypium hirsutum HOM05D002007 ORTHO05D000355 8.2e-11 72.4 129 32.6
Oeu000908.1 Olea europaea HOM05D002007 ORTHO05D000355 1.1e-10 72.0 69 53.6
Haze_10402 Corylus avellana HOM05D002007 ORTHO05D165443 1.8e-10 71.2 40 87.5
Lj2P434T45 Lonicera japonica HOM05D002007 ORTHO05D000355 1.2e-09 68.6 129 32.6
HPP92_021844 Vanilla planifolia HOM05D002007 ORTHO05D000355 7.7e-09 65.9 65 43.1
Lj4g0014196 Lotus japonicus HOM05D002007 ORTHO05D000355 1.0e-08 65.5 74 41.9
MD09G1262300 Malus domestica HOM05D002007 ORTHO05D000355 1.0e-08 65.5 123 31.7
Actinidia17226 Actinidia chinensis HOM05D002007 ORTHO05D000355 1.3e-08 65.1 129 32.6
Dinv36804 Davidia involucrata HOM05D002007 ORTHO05D000355 7.2e-07 59.3 92 37.0
Ciclev10000932m.g Citrus clementina HOM05D002007 ORTHO05D000355 1.6e-06 58.2 131 30.5


User provided reference genes

Program Settings