Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 2.6e-74 282.0 139 100.0
Haze_10417 Corylus avellana HOM05D054148 ORTHO05D005643 4.3e-37 158.3 176 55.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 4.1e-24 115.2 56 94.6
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 4.1e-24 115.2 56 94.6
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 1.7e-22 109.8 56 89.3
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 1.7e-22 109.8 64 82.8
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 4.4e-18 95.1 104 50.0
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 4.9e-17 91.7 62 67.7
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.9e-16 89.7 64 65.6
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 1.9e-16 89.7 62 66.1
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 2.4e-16 89.4 62 67.7
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 2.4e-16 89.4 62 67.7
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 2.4e-16 89.4 62 67.7
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 4.2e-16 88.6 62 66.1
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 7.1e-16 87.8 64 62.5
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 1.2e-15 87.0 64 65.6
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 1.6e-15 86.7 62 64.5
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 1.6e-15 86.7 91 51.6
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 6.0e-15 84.7 58 70.7
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 1.0e-14 84.0 61 63.9
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 1.3e-14 83.6 65 63.1
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 1.3e-14 83.6 51 72.5
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.7e-14 83.2 68 63.2
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 1.7e-14 83.2 64 65.6
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 3.0e-14 82.4 64 67.2
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 5.1e-14 81.6 64 60.9
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 6.6e-14 81.3 64 65.6
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 6.6e-14 81.3 64 65.6
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 6.6e-14 81.3 64 65.6
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 6.6e-14 81.3 64 65.6
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 1.1e-13 80.5 64 60.9
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 1.1e-13 80.5 57 66.7
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 1.1e-13 80.5 57 64.9
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.5e-13 80.1 61 59.0
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 1.9e-13 79.7 64 60.9
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 2.5e-13 79.3 59 67.8
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 3.3e-13 79.0 58 62.1
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 3.3e-13 79.0 64 64.1
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 3.3e-13 79.0 64 64.1
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 4.3e-13 78.6 57 68.4
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 4.3e-13 78.6 65 61.5
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 5.6e-13 78.2 59 66.1
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 7.3e-13 77.8 64 59.4
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 9.6e-13 77.4 62 62.9
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 1.6e-12 76.6 62 54.8
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 2.1e-12 76.3 64 60.9
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 4.8e-12 75.1 62 58.1
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 4.8e-12 75.1 64 56.2
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 4.8e-12 75.1 65 56.9
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 8.1e-12 74.3 64 60.9
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 1.1e-11 73.9 64 57.8
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 1.1e-11 73.9 64 59.4
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 1.4e-11 73.6 64 57.8
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.8e-11 73.2 64 56.2
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 2.4e-11 72.8 61 55.7
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 2.4e-11 72.8 109 42.2
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 3.1e-11 72.4 40 80.0
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 3.1e-11 72.4 64 57.8
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 4.0e-11 72.0 62 54.8
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 5.3e-11 71.6 62 54.8
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 6.9e-11 71.2 64 56.2
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 6.9e-11 71.2 65 56.9
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 9.0e-11 70.9 58 58.6
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 1.2e-10 70.5 47 66.0
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 1.5e-10 70.1 56 60.7
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 2.0e-10 69.7 62 56.5
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 2.0e-10 69.7 64 56.2
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 2.6e-10 69.3 64 54.7
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 7.6e-10 67.8 83 39.8
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 7.6e-10 67.8 65 56.9
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 7.6e-10 67.8 65 56.9
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 7.6e-10 67.8 66 50.0
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 9.9e-10 67.4 66 50.0
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 9.9e-10 67.4 64 57.8
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 1.3e-09 67.0 59 52.5
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 1.7e-09 66.6 67 55.2
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 1.7e-09 66.6 62 54.8
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.7e-09 66.6 66 54.5
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 2.9e-09 65.9 71 49.3
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 3.8e-09 65.5 38 76.3
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 4.9e-09 65.1 59 54.2
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 6.4e-09 64.7 42 69.0
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 6.4e-09 64.7 64 57.8
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 6.4e-09 64.7 62 51.6
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 1.9e-08 63.2 65 50.8
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 2.4e-08 62.8 64 56.2
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 2.4e-08 62.8 64 56.2
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 2.4e-08 62.8 57 50.9
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 3.2e-08 62.4 64 53.1
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 4.2e-08 62.0 59 52.5
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 1.6e-07 60.1 66 47.0
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 1.6e-07 60.1 56 53.6
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.6e-07 60.1 52 57.7
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 2.1e-07 59.7 66 53.0
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 2.1e-07 59.7 61 45.9
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 2.7e-07 59.3 70 55.7
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 2.7e-07 59.3 66 54.5
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 3.5e-07 58.9 56 53.6
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 3.5e-07 58.9 56 51.8
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 4.6e-07 58.5 64 51.6
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 4.6e-07 58.5 66 51.5
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 6.0e-07 58.2 38 65.8
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 7.9e-07 57.8 64 53.1
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 1.0e-06 57.4 68 48.5
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 1.0e-06 57.4 65 50.8
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 1.0e-06 57.4 65 50.8
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 1.3e-06 57.0 70 54.3
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 2.3e-06 56.2 102 35.3
BcaB03g16450 Brassica carinata HOM05D000563 ORTHO05D005643 5.1e-06 55.1 66 51.5
BcaB03g16451 Brassica carinata HOM05D004925 ORTHO05D005643 5.1e-06 55.1 63 52.4
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 5.1e-06 55.1 117 32.5
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 6.6e-06 54.7 65 53.8
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 6.6e-06 54.7 72 44.4
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 6.6e-06 54.7 58 50.0
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 8.7e-06 54.3 26 88.5


User provided reference genes

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