Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10401 Corylus avellana HOM05D000007 ORTHO05D000039 1.5e-65 252.7 122 100.0
Haze_10413 Corylus avellana HOM05D000007 ORTHO05D000039 4.3e-57 224.6 121 90.1
Cfa004503 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.5e-49 198.7 123 79.7
Cfa005168 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.1e-47 191.8 122 78.7
Haze_10408 Corylus avellana HOM05D000007 ORTHO05D000039 6.4e-45 184.1 116 79.3
Haze_10194 Corylus avellana HOM05D000007 ORTHO05D000039 1.2e-22 110.2 126 47.6
Haze_10195 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-21 106.7 124 49.2
Cfa004551 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.2e-20 101.7 127 45.7
Cfa004500 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.1e-17 93.6 56 78.6
Haze_10070 Corylus avellana HOM05D000007 ORTHO05D000039 1.3e-16 90.1 127 44.9
Haze_10060 Corylus avellana HOM05D000257 ORTHO05D004041 9.9e-14 80.5 123 40.7
Cfa001140 Carpinus fangiana HOM05D000007 ORTHO05D000039 8.4e-13 77.4 123 38.2
Sopen07g027210 Solanum pennellii HOM05D000007 ORTHO05D000039 6.0e-11 71.2 118 35.6
PGSC0003DMG400020424 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.1e-09 67.0 122 34.4
Cfa004599 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.3e-09 65.5 90 43.3
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 4.8e-08 61.6 111 34.2
Cfa004506 Carpinus fangiana HOM05D000257 ORTHO05D004041 8.1e-08 60.8 99 36.4
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-07 59.3 119 32.8
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 3.1e-07 58.9 100 38.0
MSTRG.15075 Avicennia marina HOM05D000007 ORTHO05D000039 4.0e-07 58.5 124 31.5
Lj1P673T32 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-07 58.5 123 30.9
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 4.0e-07 58.5 125 30.4
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 4.0e-07 58.5 118 33.1
Prupe.6G125500 Prunus persica HOM05D000007 ORTHO05D005026 4.0e-07 58.5 122 32.8
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 9.0e-07 57.4 120 31.7
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 9.0e-07 57.4 125 34.4
Lj1P670T34 Lonicera japonica HOM05D000007 ORTHO05D000039 9.0e-07 57.4 124 32.3
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 9.0e-07 57.4 125 34.4
Lj1P655T32 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-06 57.0 103 35.9
Prupe.4G190200 Prunus persica HOM05D000007 ORTHO05D000039 1.5e-06 56.6 122 33.6
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-06 55.8 118 33.9
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 2.6e-06 55.8 120 32.5
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 4.5e-06 55.1 123 33.3
Prupe.4G151100 Prunus persica HOM05D000007 ORTHO05D000039 5.8e-06 54.7 120 31.7
Lj1C664T13 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-05 53.9 118 31.4
Lj6C667T6 Lonicera japonica HOM05D000007 ORTHO05D000017 1.0e-05 53.9 118 29.7


User provided reference genes

Program Settings