Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10320 Corylus avellana HOM05D002370 ORTHO05D003878 4.6e-222 774.2 390 100.0
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 1.2e-140 503.8 293 87.4
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 2.4e-138 496.1 293 86.7
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 9.5e-135 484.2 293 84.6
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 9.5e-135 484.2 293 84.3
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 3.6e-134 482.3 293 85.3
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 6.2e-134 481.5 293 84.3
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 1.1e-133 480.7 293 83.6
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 1.8e-133 479.9 293 82.9
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 2.3e-133 479.6 293 83.3
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 4.0e-133 478.8 293 83.3
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 5.2e-133 478.4 293 83.3
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 2.0e-132 476.5 293 81.6
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 2.0e-132 476.5 293 81.6
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 4.4e-132 475.3 293 81.6
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 4.4e-132 475.3 293 81.6
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 9.9e-132 474.2 293 84.0
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 2.2e-131 473.0 293 81.2
MD10G1112000 Malus domestica HOM05D002370 ORTHO05D003878 2.2e-131 473.0 293 84.3
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 2.9e-131 472.6 293 82.9
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 3.7e-131 472.2 293 82.6
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 2.4e-130 469.5 293 81.2
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 9.2e-130 467.6 293 80.9
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 1.2e-129 467.2 293 81.9
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 2.1e-129 466.5 293 80.5
Lalb_Chr16g0376321 Lupinus albus HOM05D002370 ORTHO05D003878 4.6e-129 465.3 294 81.0
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 6.0e-129 464.9 293 80.9
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 1.3e-128 463.8 293 81.2
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 3.0e-128 462.6 293 80.2
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 6.6e-128 461.5 293 80.9
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 1.5e-127 460.3 293 81.2
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 1.5e-127 460.3 293 81.2
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 1.5e-127 460.3 293 80.9
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 4.3e-127 458.8 298 78.2
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 4.3e-127 458.8 293 79.5
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 4.3e-127 458.8 293 80.2
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 5.6e-127 458.4 293 80.5
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.1e-126 456.4 293 80.2
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 2.1e-126 456.4 293 80.9
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 3.6e-126 455.7 294 81.0
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 4.7e-126 455.3 293 79.9
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 6.2e-126 454.9 293 80.9
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 8.1e-126 454.5 293 79.9
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 8.1e-126 454.5 294 81.3
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 1.1e-125 454.1 293 78.8
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 1.1e-125 454.1 293 79.2
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 1.1e-125 454.1 293 77.8
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 1.8e-125 453.4 294 80.3
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 3.1e-125 452.6 293 79.5
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 5.2e-125 451.8 293 77.1
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 5.2e-125 451.8 293 77.1
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 8.9e-125 451.1 293 79.2
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 1.2e-124 450.7 293 78.8
Hma1.2p1_1758F.1_g301190 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 1.2e-124 450.7 293 78.8
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 1.5e-124 450.3 293 78.8
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 3.4e-124 449.1 293 78.5
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 3.4e-124 449.1 293 78.5
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 3.4e-124 449.1 293 79.2
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 4.4e-124 448.7 294 80.3
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 5.8e-124 448.4 293 79.9
CAN.G606.78 Capsicum annuum HOM05D002370 ORTHO05D003878 9.9e-124 447.6 287 79.4
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 9.9e-124 447.6 293 79.2
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 1.3e-123 447.2 293 77.5
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.2e-123 446.4 293 80.5
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 2.9e-123 446.0 294 79.6
TAR625G0605 Trochodendron aralioides HOM05D002370 ORTHO05D003878 2.9e-123 446.0 283 81.6
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 4.9e-123 445.3 293 80.2
FAN24G1227 Fragaria x ananassa HOM05D002370 ORTHO05D003878 6.4e-123 444.9 293 79.9
Psat4g229000 Pisum sativum HOM05D002370 ORTHO05D003878 6.4e-123 444.9 293 77.5
SalBow6G1889 Salvia bowleyana HOM05D002370 ORTHO05D003878 1.1e-122 444.1 293 77.8
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 1.4e-122 443.7 294 78.2
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 1.4e-122 443.7 268 84.3
Oeu025303.1 Olea europaea HOM05D002370 ORTHO05D003878 2.4e-122 443.0 293 77.1
TPR.G8301 Trifolium pratense HOM05D002370 ORTHO05D003878 2.4e-122 443.0 293 77.8
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 3.2e-122 442.6 293 77.1
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 3.2e-122 442.6 293 77.1
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 1.2e-121 440.7 293 76.8
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 2.1e-121 439.9 293 77.1
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 2.1e-121 439.9 294 76.2
vmacro01937 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 2.1e-121 439.9 293 77.8
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 3.5e-121 439.1 333 69.7
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 6.0e-121 438.3 293 76.8
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 1.3e-120 437.2 293 76.5
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 1.3e-120 437.2 293 76.5
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 1.3e-120 437.2 293 74.1
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 1.7e-120 436.8 293 76.1
Oeu028915.2 Olea europaea HOM05D002370 ORTHO05D003878 1.7e-120 436.8 293 76.1
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 3.0e-120 436.0 293 76.1
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 3.0e-120 436.0 293 79.2
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 5.1e-120 435.3 293 77.1
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 8.7e-120 434.5 294 76.5
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 8.7e-120 434.5 294 76.5
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 8.7e-120 434.5 294 76.5
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 1.1e-119 434.1 294 76.5
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 1.5e-119 433.7 294 76.5
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 1.5e-119 433.7 293 76.8
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 9.6e-119 431.0 293 75.4
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 1.3e-118 430.6 294 76.2
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 1.6e-118 430.3 307 74.3
CAN.G1627.7 Capsicum annuum HOM05D002370 ORTHO05D003878 2.1e-118 429.9 294 77.2
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 2.1e-118 429.9 294 76.9
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 4.8e-118 428.7 293 75.4
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 1.8e-117 426.8 293 75.4
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 2.0e-116 423.3 293 74.4
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 2.9e-115 419.5 268 80.2
CDE06G0012 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 2.9e-115 419.5 294 75.2
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 4.2e-114 415.6 294 73.1
Actinidia02446 Actinidia chinensis HOM05D002370 ORTHO05D003878 5.6e-111 405.2 254 82.3
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 7.3e-111 404.8 293 74.1
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 2.8e-110 402.9 283 74.9
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 2.8e-110 402.9 293 70.3
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 4.8e-110 402.1 295 71.2
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 8.1e-110 401.4 295 71.2
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 1.8e-109 400.2 295 70.5
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 2.4e-109 399.8 293 73.0
Sc18g0007320 Simmondsia chinensis HOM05D002370 ORTHO05D003878 9.0e-109 397.9 251 82.1
Cc02_g20160 Coffea canephora HOM05D002370 ORTHO05D003878 1.7e-107 393.7 289 72.3
Lsat_1_v5_gn_4_143680 Lactuca sativa HOM05D002370 ORTHO05D003878 2.3e-104 383.3 293 71.0
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 1.5e-103 380.6 302 66.6
SGA_v2.0_scaffold519G52682 Striga asiatica HOM05D002370 ORTHO05D003878 7.4e-103 378.3 293 68.3
CAN.G411.104 Capsicum annuum HOM05D002370 ORTHO05D003878 8.1e-102 374.8 272 73.5
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 3.8e-99 365.9 294 68.0
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 8.4e-99 364.8 295 67.5
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 8.7e-96 354.8 300 64.3
CAN.G1164.4 Capsicum annuum HOM05D002370 ORTHO05D003878 8.2e-94 348.2 257 73.2
Os05g0235300 Oryza sativa ssp. japonica HOM05D002370 ORTHO05D003878 8.2e-94 348.2 253 73.9
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 5.9e-84 315.5 301 57.5
CAN.G411.96 Capsicum annuum HOM05D002370 ORTHO05D003878 1.7e-83 313.9 242 69.8
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 2.2e-83 313.5 300 56.7
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 1.1e-82 311.2 302 56.0
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 2.2e-75 287.0 302 53.6
CAN.G289.58 Capsicum annuum HOM05D002370 ORTHO05D003878 1.1e-66 258.1 217 65.0
CAN.G1164.1 Capsicum annuum HOM05D002370 ORTHO05D003878 2.5e-66 256.9 204 67.6
CAN.G1627.3 Capsicum annuum HOM05D002370 ORTHO05D003878 1.0e-64 251.5 241 58.5
Haze_10322 Corylus avellana HOM05D002370 ORTHO05D003878 6.1e-57 225.7 141 84.4
PRCOL_00002418 Prasinoderma coloniale HOM05D002370 ORTHO05D003878 6.5e-51 205.7 282 41.1
Thecc.06G048300 Theobroma cacao HOM05D002370 ORTHO05D037785 4.1e-45 186.4 141 72.3
Thecc.01G281900 Theobroma cacao HOM05D002370 ORTHO05D037785 7.0e-45 185.7 126 78.6
CAN.G411.107 Capsicum annuum HOM05D002370 ORTHO05D003878 6.6e-43 179.1 149 63.8
CBR_g23926 Chara braunii HOM05D002370 ORTHO05D003878 3.6e-41 173.3 267 40.1
MCO06G142 Micromonas commoda HOM05D002370 ORTHO05D003878 1.0e-40 171.8 272 40.8
Actinidia17531 Actinidia chinensis HOM05D002370 ORTHO05D003878 1.4e-40 171.4 159 62.9
Cre09.g400553 Chlamydomonas reinhardtii HOM05D002370 ORTHO05D003878 7.0e-37 159.1 276 36.6
CAN.G12816.1 Capsicum annuum HOM05D002370 ORTHO05D003878 1.2e-36 158.3 153 60.1
Cfa026368 Carpinus fangiana HOM05D002370 ORTHO05D003878 7.5e-31 139.0 265 35.5
CAN.G9920.1 Capsicum annuum HOM05D002370 ORTHO05D005166 4.1e-21 106.7 76 68.4
Ah.01g024560 Amaranthus hybridus HOM05D002370 ORTHO05D003878 1.6e-20 104.8 165 44.8
TAR381G0014 Trochodendron aralioides HOM05D002370 ORTHO05D414920 4.6e-20 103.2 226 38.1
Thecc.08G169400 Theobroma cacao HOM05D002370 ORTHO05D037785 1.1e-16 92.0 120 48.3
Cfa009306 Carpinus fangiana HOM05D002973 ORTHO05D003383 1.7e-06 58.2 123 35.0
Haze_12337 Corylus avellana HOM05D002973 ORTHO05D003383 1.7e-06 58.2 123 35.0


User provided reference genes

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