Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 1.1e-190 669.8 360 100.0
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.3e-174 615.1 360 89.4
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 1.7e-106 390.2 352 61.6
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 7.1e-76 288.5 372 52.2
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.0e-45 188.3 378 40.7
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.3e-32 144.8 373 33.8
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.1e-31 140.2 375 34.4
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.1e-31 140.2 371 34.0
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 7.7e-30 135.6 345 34.2
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 7.7e-30 135.6 392 34.2
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 3.0e-26 123.6 380 28.2
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.2e-24 117.5 356 30.1
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.8e-24 117.1 352 31.8
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.1e-23 115.2 351 29.6
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 1.1e-23 115.2 367 29.7
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.4e-23 114.8 385 30.4
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 4.1e-23 113.2 352 29.8
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 5.3e-23 112.8 356 31.7
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 9.1e-23 112.1 375 30.1
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 1.6e-22 111.3 357 28.6
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 5.9e-22 109.4 361 31.6
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 1.7e-21 107.8 376 31.4
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 2.2e-21 107.5 356 30.9
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.2e-21 107.5 367 31.9
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 2.9e-21 107.1 349 29.8
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 2.7e-19 100.5 360 29.2
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 2.7e-19 100.5 354 31.1
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.6e-19 100.1 357 32.8
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.7e-19 99.8 394 27.7
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 1.8e-18 97.8 386 29.3
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.8e-18 97.8 123 43.1
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 4.0e-18 96.7 332 29.2
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 8.8e-18 95.5 358 29.3
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.6e-17 94.0 356 29.2
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 3.3e-17 93.6 346 29.5
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 7.5e-17 92.4 352 29.8
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 7.5e-17 92.4 394 29.7
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 7.5e-17 92.4 356 28.9
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.3e-16 91.7 309 31.1
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 3.7e-16 90.1 345 27.2
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 3.7e-16 90.1 345 27.2
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 6.3e-16 89.4 346 29.8
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.2e-16 89.0 356 28.7
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 8.2e-16 89.0 346 27.2
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 1.4e-15 88.2 373 29.2
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 2.4e-15 87.4 353 27.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.1e-15 87.0 350 29.1
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.3e-15 86.3 349 26.4
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 7.0e-15 85.9 153 36.6
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 9.1e-15 85.5 347 29.4
VMungo1215G3202 Vigna mungo HOM05D023496 ORTHO05D025628 9.1e-15 85.5 360 27.8
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 1.6e-14 84.7 359 26.5
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.0e-14 84.3 343 25.9
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 2.7e-14 84.0 341 28.7
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 5.9e-14 82.8 352 24.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 7.7e-14 82.4 371 28.3
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 7.7e-14 82.4 363 27.5
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 7.7e-14 82.4 350 29.4
TAR376G0413 Trochodendron aralioides HOM05D006874 ORTHO05D008334 7.7e-14 82.4 170 40.6
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 5.0e-13 79.7 354 24.6
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 5.0e-13 79.7 349 26.6
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 6.5e-13 79.3 375 30.7
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 1.1e-12 78.6 345 31.0
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.1e-12 78.6 330 27.9
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 7.2e-12 75.9 348 28.4
Glyma.11G002500 Glycine max HOM05D023496 ORTHO05D025628 1.2e-11 75.1 361 26.9
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.1e-11 74.3 209 32.1
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 2.7e-11 73.9 342 28.7
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 6.1e-11 72.8 344 28.2
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 8.0e-11 72.4 364 25.0
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 8.0e-11 72.4 353 26.9
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.8e-10 71.2 392 26.3
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 4.0e-10 70.1 350 28.3
TAR625G0319 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.0e-10 70.1 98 48.0
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 4.0e-10 70.1 352 25.9
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 6.8e-10 69.3 315 27.0
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 6.8e-10 69.3 341 25.5
Atru.chr5.2294 Acer truncatum HOM05D016697 ORTHO05D018163 1.2e-09 68.6 120 44.2
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 3.4e-09 67.0 344 24.7
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 4.4e-09 66.6 344 25.9
Lj2g0008576 Lotus japonicus HOM05D023496 ORTHO05D025628 4.4e-09 66.6 366 25.1
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 7.5e-09 65.9 349 26.1
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 9.8e-09 65.5 360 27.2
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 2.8e-08 63.9 356 24.7
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 2.8e-08 63.9 350 27.1
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 4.8e-08 63.2 93 41.9
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 8.3e-08 62.4 257 26.8
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 1.8e-07 61.2 386 29.5
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.8e-07 61.2 138 31.2
Ciclev10029832m.g Citrus clementina HOM05D016697 ORTHO05D018163 2.4e-07 60.8 169 32.5
Solyc04g077535.1 Solanum lycopersicum HOM05D006874 ORTHO05D008334 5.4e-07 59.7 356 27.2
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.2e-06 58.5 373 25.5
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.6e-06 58.2 338 27.2
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.6e-06 58.2 338 27.2
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 2.0e-06 57.8 373 26.3
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 4.5e-06 56.6 346 27.7
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.9e-06 56.2 339 27.1
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 5.9e-06 56.2 365 26.3
RhsimUnG0041100 Rhododendron simsii HOM05D063883 ORTHO05D008334 5.9e-06 56.2 364 24.2
RhsimUnG0123100 Rhododendron simsii HOM05D063883 ORTHO05D008334 5.9e-06 56.2 364 24.2
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.7e-06 55.8 198 27.3


User provided reference genes

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