Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 0.0e+00 1102.4 554 100.0
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 4.8e-289 997.3 572 87.9
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.6e-281 972.2 578 84.9
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 6.9e-280 966.8 615 80.3
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.9e-278 961.4 552 85.7
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 6.4e-278 960.3 579 84.1
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 1.9e-277 958.7 573 83.9
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.2e-277 958.0 508 95.3
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 3.2e-277 958.0 576 84.9
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 7.9e-276 953.4 582 83.3
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.0e-275 953.0 575 83.0
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 1.3e-275 952.6 573 84.5
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.8e-275 952.2 573 83.2
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 3.9e-275 951.0 571 83.0
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.9e-275 951.0 573 83.1
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 6.7e-275 950.3 581 83.0
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 6.7e-275 950.3 575 83.1
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 6.7e-275 950.3 574 83.8
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 1.5e-274 949.1 571 82.7
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 5.6e-274 947.2 571 82.8
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 9.6e-274 946.4 547 85.9
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 1.6e-273 945.7 576 83.5
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 3.7e-273 944.5 547 85.7
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 5.3e-272 940.6 547 85.6
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 2.6e-271 938.3 572 82.3
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 3.4e-271 937.9 547 85.4
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 3.8e-270 934.5 580 80.2
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 4.9e-270 934.1 582 80.2
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 2.5e-269 931.8 580 80.0
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 3.2e-269 931.4 582 80.1
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 3.2e-269 931.4 580 80.0
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 4.2e-269 931.0 571 81.8
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 2.3e-267 925.2 571 81.6
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 3.0e-267 924.9 573 80.6
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 3.9e-267 924.5 573 81.3
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 2.2e-265 918.7 580 79.8
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 6.3e-265 917.1 572 80.6
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 8.2e-265 916.8 575 79.1
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 5.3e-264 914.1 577 79.2
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 1.5e-263 912.5 585 76.8
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 2.6e-263 911.8 572 80.1
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 3.8e-262 907.9 521 86.6
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 6.5e-262 907.1 572 80.1
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 6.5e-262 907.1 556 82.0
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 6.5e-262 907.1 684 70.8
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 1.1e-261 906.4 522 86.6
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 1.1e-261 906.4 525 85.9
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 1.9e-261 905.6 522 86.4
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 2.5e-261 905.2 572 78.7
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.6e-260 902.5 525 85.3
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 1.8e-259 899.0 579 78.4
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 3.0e-259 898.3 583 75.8
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 1.5e-258 896.0 577 77.6
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 1.3e-257 892.9 582 75.6
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 8.2e-257 890.2 588 73.8
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.1e-256 889.8 578 77.2
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 1.1e-256 889.8 588 74.3
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 1.8e-256 889.0 588 73.3
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 3.1e-256 888.3 547 78.2
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 9.1e-256 886.7 585 75.0
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 9.1e-256 886.7 585 75.0
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 9.1e-256 886.7 547 77.9
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 1.2e-255 886.3 583 75.1
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.5e-255 885.9 563 78.7
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 2.6e-255 885.2 585 74.7
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 2.6e-255 885.2 582 76.5
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 2.6e-255 885.2 575 76.0
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 4.5e-255 884.4 583 75.0
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 4.5e-255 884.4 576 76.4
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 7.7e-255 883.6 589 73.7
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 7.7e-255 883.6 587 73.9
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 5.0e-254 880.9 575 76.3
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 5.0e-254 880.9 541 78.7
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 5.0e-254 880.9 573 76.1
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.4e-253 879.4 535 80.7
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 2.5e-253 878.6 581 75.7
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 7.2e-253 877.1 574 75.8
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 1.6e-252 875.9 589 73.2
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.6e-252 875.9 589 73.2
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.7e-252 875.2 586 75.6
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 2.7e-252 875.2 574 75.6
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 7.9e-252 873.6 568 79.2
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 2.3e-251 872.1 521 82.1
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 6.7e-251 870.5 544 78.5
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 1.1e-248 863.2 548 76.8
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.0e-248 860.5 570 75.3
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 2.6e-247 858.6 574 74.9
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 5.9e-247 857.4 570 74.9
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 7.2e-245 850.5 524 80.3
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 7.2e-245 850.5 521 79.8
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 8.8e-243 843.6 573 74.2
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.1e-240 836.6 439 94.8
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 4.5e-239 831.2 542 75.5
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 7.7e-239 830.5 590 70.5
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 2.1e-236 822.4 499 83.0
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 5.2e-235 817.8 498 81.9
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 3.3e-234 815.1 459 86.9
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 7.5e-234 813.9 443 91.0
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 1.7e-233 812.8 487 83.8
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 4.5e-231 804.7 521 78.3
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 1.3e-230 803.1 570 72.3
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.1e-229 800.0 459 83.0
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 2.7e-228 795.4 542 72.1
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 4.8e-225 784.6 555 70.6
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 3.0e-219 765.4 543 70.0
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 6.3e-217 757.7 459 80.8
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 1.2e-210 736.9 544 68.9
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 5.8e-194 681.4 542 63.8
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 9.2e-192 674.1 563 65.4
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.3e-189 665.6 459 73.6
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 5.2e-187 658.3 575 57.9
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 5.1e-166 588.6 527 57.1
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 2.0e-162 576.6 561 53.1
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 8.7e-150 534.6 461 59.4
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 8.8e-142 508.1 332 76.5
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 2.0e-141 506.9 520 51.9
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.4e-123 446.8 285 78.2
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 8.0e-87 325.5 254 61.4
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.4e-75 287.3 150 90.7
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.2e-50 205.3 490 29.8
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 1.9e-43 181.4 208 50.5
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 7.2e-35 152.9 107 76.6
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 2.9e-28 131.0 434 25.1
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 6.3e-23 113.2 66 81.8
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 2.6e-21 107.8 114 50.9
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 5.9e-13 80.1 90 44.4
QL11p035429 Quercus lobata HOM05D006107 ORTHO05D007455 1.5e-11 75.5 77 58.4
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 1.4e-09 68.9 375 24.3
MCO15G166 Micromonas commoda HOM05D003397 ORTHO05D004390 4.4e-08 63.9 433 21.5
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 7.5e-08 63.2 30 93.3
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 1.4e-06 58.9 303 24.4


User provided reference genes

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