Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 8.9e-133 476.9 227 100.0
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 5.1e-80 301.6 228 68.9
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.3e-70 270.4 246 58.9
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 6.2e-70 268.1 229 62.4
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 6.9e-69 264.6 237 61.2
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.5e-68 263.5 239 59.4
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 5.8e-68 261.5 130 97.7
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 7.6e-68 261.2 235 60.9
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 1.7e-67 260.0 232 57.8
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 7.1e-66 254.6 243 58.4
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 9.3e-66 254.2 223 61.9
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 1.2e-65 253.8 243 57.2
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 3.5e-65 252.3 243 56.0
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 3.0e-64 249.2 228 60.1
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 2.5e-63 246.1 241 55.2
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 4.3e-63 245.4 246 56.9
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 2.8e-62 242.7 228 55.7
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 3.7e-62 242.3 229 56.8
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.1e-61 240.7 230 57.8
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 1.8e-61 240.0 229 57.6
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 3.1e-61 239.2 241 55.2
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 5.3e-61 238.4 238 54.6
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 2.0e-60 236.5 229 56.8
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 2.9e-59 232.6 226 58.4
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 3.8e-59 232.3 230 52.6
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.1e-58 230.7 238 53.8
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.4e-58 230.3 239 51.9
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 2.5e-58 229.6 245 53.5
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 4.2e-58 228.8 231 55.8
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 5.5e-58 228.4 237 53.6
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 1.6e-57 226.9 243 52.7
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.1e-57 226.5 186 65.1
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 6.1e-57 224.9 231 52.4
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 6.1e-57 224.9 231 52.4
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.0e-56 224.2 251 53.0
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.4e-56 223.8 240 53.3
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 1.8e-56 223.4 231 52.8
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 3.9e-56 222.2 219 54.3
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 6.7e-56 221.5 236 53.4
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 1.1e-55 220.7 233 53.2
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 4.3e-55 218.8 231 53.7
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 1.7e-54 216.9 228 53.5
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 3.7e-54 215.7 229 54.1
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.1e-53 214.2 172 64.0
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 1.1e-53 214.2 222 52.7
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 1.8e-53 213.4 220 53.6
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.8e-53 213.4 180 61.1
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 3.1e-53 212.6 235 50.2
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 3.1e-53 212.6 229 52.4
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 6.9e-53 211.5 229 53.3
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 6.9e-53 211.5 244 51.2
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 9.1e-53 211.1 172 63.4
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.2e-52 210.7 229 52.4
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 1.0e-51 207.6 228 54.4
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 2.9e-51 206.1 171 64.3
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.9e-51 206.1 238 48.7
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 1.4e-50 203.8 233 49.8
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.2e-49 200.7 217 52.5
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 1.6e-49 200.3 229 50.7
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 1.6e-49 200.3 210 53.8
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 4.7e-49 198.7 216 51.9
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 6.1e-49 198.4 221 50.7
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 1.4e-48 197.2 217 52.1
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 1.8e-48 196.8 237 48.9
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 3.9e-48 195.7 221 50.2
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 8.8e-48 194.5 216 50.5
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 1.1e-47 194.1 210 51.4
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.0e-47 193.4 220 49.1
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 5.7e-47 191.8 233 49.4
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 9.7e-47 191.0 220 49.5
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.3e-46 190.7 230 47.4
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 2.2e-46 189.9 142 64.8
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 2.8e-46 189.5 178 57.3
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 3.7e-46 189.1 236 47.9
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 3.7e-46 189.1 150 62.0
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 3.7e-46 189.1 150 62.0
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 3.7e-46 189.1 238 49.2
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 1.8e-45 186.8 216 49.1
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 2.0e-44 183.3 190 53.7
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 7.7e-44 181.4 214 47.7
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.3e-43 180.6 130 66.9
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.1e-42 177.6 236 45.8
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 3.2e-42 176.0 230 46.1
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.2e-42 176.0 165 58.8
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 4.2e-42 175.6 141 63.1
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 4.2e-42 175.6 94 80.9
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 5.5e-42 175.3 217 47.9
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 6.1e-41 171.8 218 47.2
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 2.3e-40 169.9 219 46.6
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 8.8e-40 167.9 232 43.5
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 1.1e-39 167.5 173 49.7
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 7.5e-39 164.9 128 60.9
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 6.3e-38 161.8 233 44.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 5.9e-36 155.2 187 48.1
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 7.7e-36 154.8 145 56.6
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.1e-33 146.7 109 65.1
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.3e-32 143.3 163 49.7
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 5.2e-32 142.1 162 48.8
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.6e-31 139.8 138 54.3
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 1.1e-29 134.4 198 42.4
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.6e-28 130.6 178 43.3
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.1e-25 120.2 139 46.8
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 3.0e-24 116.3 91 54.9
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 1.5e-23 114.0 138 48.6
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 3.4e-23 112.8 150 38.0
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 2.8e-22 109.8 155 43.2
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 1.2e-20 104.4 137 46.0
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.2e-20 104.4 113 46.0
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 1.6e-20 104.0 198 36.9
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.9e-19 99.8 125 46.4
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.6e-17 94.0 102 53.9
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.2e-15 87.8 141 41.1
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 9.8e-15 84.7 103 44.7
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 3.0e-11 73.2 137 34.3
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 2.2e-06 57.0 90 40.0


User provided reference genes

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