Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_10030 Corylus avellana HOM05D004289 ORTHO05D005141 5.9e-28 127.1 78 100.0
Nitab4.5_0005169g0070 Nicotiana tabacum HOM05D004289 ORTHO05D005141 3.8e-19 97.8 72 69.4
CiPaw.05G003600 Carya illinoinensis HOM05D004289 ORTHO05D005141 2.5e-18 95.1 78 76.9
CSS0038337 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 1.0e-16 89.7 72 68.1
Eucgr.I02780 Eucalyptus grandis HOM05D004289 ORTHO05D005141 1.4e-16 89.4 72 79.2
Lsat_1_v5_gn_5_104580 Lactuca sativa HOM05D004289 ORTHO05D005141 1.8e-16 89.0 72 65.3
MD08G1244000 Malus domestica HOM05D004289 ORTHO05D005141 1.8e-16 89.0 72 66.7
MELO3C016488.2 Cucumis melo HOM05D004289 ORTHO05D005141 4.0e-16 87.8 72 63.9
MD15G1438300 Malus domestica HOM05D004289 ORTHO05D005141 8.9e-16 86.7 72 66.7
Oeu058640.2 Olea europaea HOM05D004289 ORTHO05D005141 8.9e-16 86.7 74 64.9
GSVIVG01023230001 Vitis vinifera HOM05D004289 ORTHO05D005141 8.9e-16 86.7 68 69.1
PSO017G2658 Papaver somniferum HOM05D004289 ORTHO05D005141 1.2e-15 86.3 72 62.5
RcHm_v2.0_Chr7g0220501 Rosa chinensis HOM05D004289 ORTHO05D005141 1.5e-15 85.9 72 63.9
Sabra01G0171700 Salix brachista HOM05D004289 ORTHO05D005141 2.6e-15 85.1 72 61.1
Manes.07G025900 Manihot esculenta HOM05D004289 ORTHO05D005141 3.4e-15 84.7 72 75.0
PSO170G0294 Papaver somniferum HOM05D004289 ORTHO05D005141 4.4e-15 84.3 72 61.1
AT1G09645 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 5.7e-15 84.0 70 64.3
vmacro19856 Vaccinium macrocarpon HOM05D004289 ORTHO05D005141 5.7e-15 84.0 72 66.7
CSS0038950 Camellia sinensis var. sinensis HOM05D004289 ORTHO05D005141 7.5e-15 83.6 72 69.4
Ciclev10003782m.g Citrus clementina HOM05D004289 ORTHO05D005141 7.5e-15 83.6 72 63.9
Thhalv10009166m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 7.5e-15 83.6 73 61.6
Prupe.1G581300 Prunus persica HOM05D004289 ORTHO05D005141 7.5e-15 83.6 72 66.7
Cfa004471 Carpinus fangiana HOM05D004289 ORTHO05D005141 1.3e-14 82.8 60 88.3
Potri.004G226100 Populus trichocarpa HOM05D004289 ORTHO05D005141 1.3e-14 82.8 72 59.7
BcaB03g13311 Brassica carinata HOM05D004289 ORTHO05D005141 1.7e-14 82.4 70 62.9
Migut.B00750 Erythranthe guttata HOM05D004289 ORTHO05D005141 1.7e-14 82.4 72 62.5
Manes.10G116200 Manihot esculenta HOM05D004289 ORTHO05D005141 1.7e-14 82.4 73 69.9
C08p13100 Brassica napus HOM05D004289 ORTHO05D005141 2.2e-14 82.0 70 62.9
BolC8t48938H Brassica oleracea HOM05D002143 ORTHO05D002260 2.2e-14 82.0 70 62.9
Sp1g08260 Schrenkiella parvula HOM05D004289 ORTHO05D005141 2.2e-14 82.0 70 62.9
AL1G20190 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 2.9e-14 81.6 70 62.9
EL10Ac6g14140 Beta vulgaris HOM05D004289 ORTHO05D005141 2.9e-14 81.6 72 61.1
Sp2g05730 Schrenkiella parvula HOM05D004289 ORTHO05D005141 2.9e-14 81.6 70 64.3
A06p06330 Brassica napus HOM05D004289 ORTHO05D005141 3.7e-14 81.3 72 61.1
C05p07700 Brassica napus HOM05D004289 ORTHO05D005141 3.7e-14 81.3 72 61.1
BolC5t29521H Brassica oleracea HOM05D004289 ORTHO05D005141 3.7e-14 81.3 72 61.1
BraA06t23844Z Brassica rapa HOM05D004289 ORTHO05D005141 3.7e-14 81.3 72 61.1
CARHR054450 Cardamine hirsuta HOM05D004289 ORTHO05D005141 3.7e-14 81.3 70 64.3
THA.LOC104823700 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 4.9e-14 80.9 70 64.3
AT1G57765 Arabidopsis thaliana HOM05D004289 ORTHO05D005141 6.3e-14 80.5 70 62.9
BcaC07g41867 Brassica carinata HOM05D004289 ORTHO05D005141 8.3e-14 80.1 70 62.9
C08p49340 Brassica napus HOM05D004289 ORTHO05D005141 8.3e-14 80.1 70 62.9
CARHR009620 Cardamine hirsuta HOM05D004289 ORTHO05D005141 8.3e-14 80.1 70 61.4
Lsat_1_v5_gn_9_119620 Lactuca sativa HOM05D004289 ORTHO05D005141 8.3e-14 80.1 72 59.7
TAR628G0462 Trochodendron aralioides HOM05D004289 ORTHO05D005141 8.3e-14 80.1 72 58.3
VMungo0540G0867 Vigna mungo HOM05D004289 ORTHO05D005141 8.3e-14 80.1 74 63.5
BraA08t35355Z Brassica rapa HOM05D002143 ORTHO05D002260 1.1e-13 79.7 70 60.0
Potri.003G005400 Populus trichocarpa HOM05D004289 ORTHO05D005141 1.1e-13 79.7 74 60.8
THA.LOC104816824 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 1.1e-13 79.7 62 67.7
BolC8t52471H Brassica oleracea HOM05D004289 ORTHO05D005141 1.4e-13 79.3 70 61.4
Duzib052G0484 Durio zibethinus HOM05D004289 ORTHO05D005141 1.4e-13 79.3 67 62.7
HanXRQChr06g0182751 Helianthus annuus HOM05D004289 ORTHO05D005141 1.4e-13 79.3 66 62.1
Thecc.02G016600 Theobroma cacao HOM05D004289 ORTHO05D005141 1.4e-13 79.3 72 62.5
AUR62028456 Chenopodium quinoa HOM05D004289 ORTHO05D005141 1.8e-13 79.0 72 61.1
Gohir.D02G237200 Gossypium hirsutum HOM05D004289 ORTHO05D005141 1.8e-13 79.0 67 61.2
Gorai.005G265800 Gossypium raimondii HOM05D004289 ORTHO05D005141 1.8e-13 79.0 67 61.2
Gohir.A03G215700 Gossypium hirsutum HOM05D004289 ORTHO05D005141 3.2e-13 78.2 65 63.1
MBI06_g06694_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 4.1e-13 77.8 74 59.5
MBI17_g24966_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 4.1e-13 77.8 74 59.5
Thhalv10023770m.g Eutrema salsugineum HOM05D004289 ORTHO05D005141 5.4e-13 77.4 70 62.9
Sc16g0004250 Simmondsia chinensis HOM05D004289 ORTHO05D005141 5.4e-13 77.4 72 62.5
Aa31LG1G5340 Aethionema arabicum HOM05D004289 ORTHO05D005141 7.0e-13 77.0 70 60.0
Carub.0001s0900 Capsella rubella HOM05D004289 ORTHO05D005141 7.0e-13 77.0 73 58.9
TAR381G0514 Trochodendron aralioides HOM05D004289 ORTHO05D005141 7.0e-13 77.0 72 56.9
Actinidia38989 Actinidia chinensis HOM05D004289 ORTHO05D005141 1.2e-12 76.3 72 63.9
ECA236G0617 Erigeron canadensis HOM05D004289 ORTHO05D005141 1.2e-12 76.3 68 63.2
AL1G67510 Arabidopsis lyrata HOM05D004289 ORTHO05D005141 1.6e-12 75.9 70 61.4
Nn5g27488 Nelumbo nucifera HOM05D004289 ORTHO05D005141 1.6e-12 75.9 71 59.2
AUR62042238 Chenopodium quinoa HOM05D004289 ORTHO05D005141 2.7e-12 75.1 72 58.3
FAN10G0807 Fragaria x ananassa HOM05D004289 ORTHO05D005141 2.7e-12 75.1 63 61.9
COL.COLO4_17708 Corchorus olitorius HOM05D004289 ORTHO05D005141 4.6e-12 74.3 58 65.5
MBI18_g30384_MAGBIO Magnolia biondii HOM05D004289 ORTHO05D005141 4.6e-12 74.3 74 58.1
SGA_v2.0_scaffold131G34372 Striga asiatica HOM05D004289 ORTHO05D005141 4.6e-12 74.3 72 56.9
CDE08G0453 Ceratophyllum demersum HOM05D004289 ORTHO05D005141 5.9e-12 73.9 72 54.2
FvH4_5g28260 Fragaria vesca HOM05D004289 ORTHO05D005141 7.8e-12 73.6 61 62.3
FAN18G0926 Fragaria x ananassa HOM05D004289 ORTHO05D005141 7.8e-12 73.6 61 62.3
Duzib248G0764 Durio zibethinus HOM05D004289 ORTHO05D005141 1.3e-11 72.8 41 87.8
QL02p100957 Quercus lobata HOM05D004289 ORTHO05D005141 1.3e-11 72.8 71 69.0
Ah.02g128340 Amaranthus hybridus HOM05D004289 ORTHO05D005141 1.7e-11 72.4 61 63.9
Aqoxy5G00854 Aquilegia oxysepala HOM05D004289 ORTHO05D005141 1.7e-11 72.4 72 56.9
TPR.G34161 Trifolium pratense HOM05D004289 ORTHO05D005141 1.7e-11 72.4 64 59.4
Atru.chr6.550 Acer truncatum HOM05D004289 ORTHO05D005141 2.9e-11 71.6 39 89.7
Aa31LG2G11220 Aethionema arabicum HOM05D004289 ORTHO05D005141 3.9e-11 71.2 40 85.0
Phvul.006G220000 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 3.9e-11 71.2 72 65.3
TPR.G2097 Trifolium pratense HOM05D004289 ORTHO05D005141 3.9e-11 71.2 41 87.8
Carub.0002s0680 Capsella rubella HOM05D004289 ORTHO05D005141 5.0e-11 70.9 70 55.7
QL09p003196 Quercus lobata HOM05D004289 ORTHO05D005141 6.6e-11 70.5 71 50.7
QL09p004791 Quercus lobata HOM05D004289 ORTHO05D005141 6.6e-11 70.5 71 50.7
ATR1136G135 Amborella trichopoda HOM05D004289 ORTHO05D005141 8.6e-11 70.1 76 55.3
MSTRG.20324 Avicennia marina HOM05D004289 ORTHO05D005141 8.6e-11 70.1 80 50.0
Prupe.1G549500 Prunus persica HOM05D004289 ORTHO05D005141 8.6e-11 70.1 71 56.3
GSVIVG01025943001 Vitis vinifera HOM05D004289 ORTHO05D005141 8.6e-11 70.1 72 52.8
CiPaw.04G012500 Carya illinoinensis HOM05D004289 ORTHO05D005141 1.1e-10 69.7 72 54.2
HPP92_002618 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.1e-10 69.7 72 52.8
HPP92_002677 Vanilla planifolia HOM05D004289 ORTHO05D005141 1.1e-10 69.7 72 52.8
unitig_32.g11200 Utricularia gibba HOM05D004289 ORTHO05D005141 1.5e-10 69.3 78 50.0
unitig_748.g7732 Utricularia gibba HOM05D004289 ORTHO05D005141 1.9e-10 68.9 40 82.5
CiPaw.03G018600 Carya illinoinensis HOM05D004289 ORTHO05D005141 2.5e-10 68.6 72 52.8
CsaV3_5G040360 Cucumis sativus L. HOM05D004289 ORTHO05D005141 2.5e-10 68.6 73 56.2
Zm00001eb288300 Zea mays HOM05D004289 ORTHO05D005141 3.3e-10 68.2 63 55.6
TWI14G0848 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 4.3e-10 67.8 71 53.5
TWI23G1156 Tripterygium wilfordii HOM05D004289 ORTHO05D005141 4.3e-10 67.8 71 53.5
ClCG08G000420 Citrullus lanatus HOM05D004289 ORTHO05D005141 5.6e-10 67.4 77 53.2
Migut.C01335 Erythranthe guttata HOM05D004289 ORTHO05D005141 5.6e-10 67.4 39 84.6
Glyma.08G237900 Glycine max HOM05D004289 ORTHO05D005141 5.6e-10 67.4 72 51.4
Lj3g0023226 Lotus japonicus HOM05D004289 ORTHO05D005141 5.6e-10 67.4 72 51.4
SalBow7G0958 Salvia bowleyana HOM05D004289 ORTHO05D005141 5.6e-10 67.4 62 59.7
VMungo0540G1552 Vigna mungo HOM05D004289 ORTHO05D005141 7.3e-10 67.0 64 54.7
Sabra19G0088300 Salix brachista HOM05D004289 ORTHO05D005141 9.5e-10 66.6 71 52.1
MELO3C022208.2 Cucumis melo HOM05D004289 ORTHO05D005141 1.6e-09 65.9 73 54.8
Phvul.011G000300 Phaseolus vulgaris HOM05D004289 ORTHO05D005141 1.6e-09 65.9 72 50.0
Sed0020386 Sechium edule HOM05D004289 ORTHO05D005141 1.6e-09 65.9 72 58.3
Glyma.12G165600 Glycine max HOM05D004289 ORTHO05D005141 2.1e-09 65.5 72 69.4
Glyma.16G002000 Glycine max HOM05D004289 ORTHO05D005141 2.1e-09 65.5 72 68.1
SalBow7G1625 Salvia bowleyana HOM05D004289 ORTHO05D005141 2.1e-09 65.5 36 88.9
Lalb_Chr15g0090801 Lupinus albus HOM05D004289 ORTHO05D005141 2.8e-09 65.1 72 68.1
Medtr4g032200 Medicago truncatula HOM05D004289 ORTHO05D005141 2.8e-09 65.1 72 51.4
MD08G1216400 Malus domestica HOM05D004289 ORTHO05D005141 3.6e-09 64.7 37 83.8
Cc10_g09380 Coffea canephora HOM05D004289 ORTHO05D005141 4.7e-09 64.3 73 49.3
Gohir.A04G133900 Gossypium hirsutum HOM05D004289 ORTHO05D005141 6.2e-09 63.9 41 75.6
Gohir.D04G177000 Gossypium hirsutum HOM05D004289 ORTHO05D005141 6.2e-09 63.9 41 75.6
Gorai.012G169900 Gossypium raimondii HOM05D004289 ORTHO05D005141 6.2e-09 63.9 41 75.6
arahy.Tifrunner.gnm1.ann1.291MDK Arachis hypogaea HOM05D004289 ORTHO05D005141 8.0e-09 63.5 71 50.7
FAN13G3078 Fragaria x ananassa HOM05D004289 ORTHO05D005141 1.0e-08 63.2 37 81.1
HanXRQChr03g0067991 Helianthus annuus HOM05D004289 ORTHO05D005141 1.0e-08 63.2 70 50.0
Os05g0419600 Oryza sativa ssp. japonica HOM05D004289 ORTHO05D005141 1.0e-08 63.2 69 50.7
Sed0006384 Sechium edule HOM05D004289 ORTHO05D005141 1.0e-08 63.2 60 56.7
THA.LOC104820335 Tarenaya hassleriana HOM05D004289 ORTHO05D005141 1.0e-08 63.2 68 64.7
FvH4_5g32580 Fragaria vesca HOM05D004289 ORTHO05D005141 1.8e-08 62.4 37 78.4
MD15G1403500 Malus domestica HOM05D004289 ORTHO05D005141 1.8e-08 62.4 37 78.4
RcHm_v2.0_Chr3g0495521 Rosa chinensis HOM05D004289 ORTHO05D005141 1.8e-08 62.4 37 78.4
RcHm_v2.0_Chr7g0229261 Rosa chinensis HOM05D004289 ORTHO05D005141 1.8e-08 62.4 37 78.4
MD05G1210300 Malus domestica HOM05D004289 ORTHO05D005141 2.3e-08 62.0 37 81.1
Potri.019G077100 Populus trichocarpa HOM05D004289 ORTHO05D005141 2.3e-08 62.0 72 51.4
Nitab4.5_0029023g0010 Nicotiana tabacum HOM05D004289 ORTHO05D005141 3.1e-08 61.6 38 76.3
Peaxi162Scf00688g00334 Petunia axillaris HOM05D004289 ORTHO05D005141 3.1e-08 61.6 38 76.3
Sopen01g045750 Solanum pennellii HOM05D004289 ORTHO05D005141 3.1e-08 61.6 72 66.7
Sopen11g012540 Solanum pennellii HOM05D004289 ORTHO05D005141 3.1e-08 61.6 38 76.3
PGSC0003DMG400024883 Solanum tuberosum HOM05D004289 ORTHO05D005141 3.1e-08 61.6 72 66.7
PGSC0003DMG400025523 Solanum tuberosum HOM05D004289 ORTHO05D005141 3.1e-08 61.6 38 76.3
Zm00001eb349170 Zea mays HOM05D004289 ORTHO05D005141 6.8e-08 60.5 63 50.8
Nitab4.5_0000016g0420 Nicotiana tabacum HOM05D004289 ORTHO05D005141 8.9e-08 60.1 38 73.7
RcHm_v2.0_Chr5g0063911 Rosa chinensis HOM05D004289 ORTHO05D005141 8.9e-08 60.1 37 75.7
Lalb_Chr18g0061091 Lupinus albus HOM05D004289 ORTHO05D005141 1.5e-07 59.3 72 65.3
Oeu048223.2 Olea europaea HOM05D004289 ORTHO05D005141 3.4e-07 58.2 39 69.2
Psat7g226600 Pisum sativum HOM05D004289 ORTHO05D005141 3.4e-07 58.2 67 50.7
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 3.4e-07 58.2 39 66.7
Cfa008122 Carpinus fangiana HOM05D000042 ORTHO05D000028 4.4e-07 57.8 61 52.5
Peaxi162Scf00011g00155 Petunia axillaris HOM05D004289 ORTHO05D005141 4.4e-07 57.8 72 62.5
arahy.Tifrunner.gnm1.ann1.M3EZX1 Arachis hypogaea HOM05D004289 ORTHO05D005141 7.5e-07 57.0 66 50.0
arahy.Tifrunner.gnm1.ann1.2Z03QX Arachis hypogaea HOM05D004289 ORTHO05D005141 1.3e-06 56.2 65 66.2
Haze_13910 Corylus avellana HOM05D002143 ORTHO05D002260 2.9e-06 55.1 60 51.7
PGR042G0739 Punica granatum HOM05D004289 ORTHO05D005141 3.7e-06 54.7 72 54.2


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