Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09900 Corylus avellana HOM05D009327 ORTHO05D011487 3.9e-94 348.2 185 100.0
Cfa016945 Carpinus fangiana HOM05D009327 ORTHO05D011487 6.3e-44 181.4 141 77.3
Thecc.07G003900 Theobroma cacao HOM05D009327 ORTHO05D011487 3.1e-27 125.9 139 51.1
MD03G1040200 Malus domestica HOM05D009327 ORTHO05D011487 1.5e-21 107.1 126 52.4
COL.COLO4_07769 Corchorus olitorius HOM05D009327 ORTHO05D011487 2.0e-18 96.7 94 58.5
Prupe.6G032500 Prunus persica HOM05D009327 ORTHO05D011487 2.0e-18 96.7 135 48.9
Ciclev10010352m.g Citrus clementina HOM05D009327 ORTHO05D011487 2.7e-18 96.3 86 64.0
Gohir.D13G132800 Gossypium hirsutum HOM05D009327 ORTHO05D011487 4.5e-18 95.5 89 61.8
Gohir.A13G129600 Gossypium hirsutum HOM05D009327 ORTHO05D011487 5.9e-18 95.1 98 58.2
Lsat_1_v5_gn_9_89420 Lactuca sativa HOM05D009327 ORTHO05D011487 5.9e-18 95.1 121 46.3
Hma1.2p1_0193F.1_g084170 Hydrangea macrophylla HOM05D009327 ORTHO05D011487 3.8e-17 92.4 136 43.4
Dinv10378 Davidia involucrata HOM05D000872 ORTHO05D000777 5.0e-17 92.0 104 56.7
Gorai.013G149000 Gossypium raimondii HOM05D009327 ORTHO05D011487 5.0e-17 92.0 89 60.7
Duzib213G0719 Durio zibethinus HOM05D009327 ORTHO05D011487 3.2e-16 89.4 130 45.4
ECA240G0968 Erigeron canadensis HOM05D009327 ORTHO05D011487 1.2e-15 87.4 122 41.0
ATR0751G022 Amborella trichopoda HOM05D009327 ORTHO05D011487 8.8e-14 81.3 119 42.9
Nitab4.5_0000152g0160 Nicotiana tabacum HOM05D009327 ORTHO05D011487 1.2e-13 80.9 107 48.6
PGR031G1826 Punica granatum HOM05D009327 ORTHO05D011487 2.0e-13 80.1 120 44.2
Nitab4.5_0024826g0010 Nicotiana tabacum HOM05D009327 ORTHO05D011487 4.4e-13 79.0 107 46.7
Cpa.g.sc1077.3 Carica papaya HOM05D009327 ORTHO05D011487 5.7e-13 78.6 99 47.5
CAN.G623.56 Capsicum annuum HOM05D009327 ORTHO05D011487 2.2e-12 76.6 104 49.0
FvH4_3g41901 Fragaria vesca HOM05D009327 ORTHO05D011487 2.4e-11 73.2 83 53.0
Lalb_Chr04g0247431 Lupinus albus HOM05D009327 ORTHO05D011487 4.1e-11 72.4 83 50.6
Ah.15g094630 Amaranthus hybridus HOM05D000308 ORTHO05D011487 1.2e-10 70.9 120 40.8
Peaxi162Scf00232g00417 Petunia axillaris HOM05D009327 ORTHO05D011487 2.0e-10 70.1 105 43.8
SGA_v2.0_scaffold7G03534 Striga asiatica HOM05D009327 ORTHO05D011487 2.0e-10 70.1 101 46.5
Migut.M01593 Erythranthe guttata HOM05D009327 ORTHO05D011487 4.5e-10 68.9 126 38.1
HanXRQChr03g0077691 Helianthus annuus HOM05D009327 ORTHO05D011487 2.3e-09 66.6 123 35.8
Oeu005541.1 Olea europaea HOM05D009327 ORTHO05D011487 2.9e-09 66.2 97 45.4
Thecc.03G022400 Theobroma cacao HOM05D000805 ORTHO05D000624 6.5e-09 65.1 147 34.7
AUR62035636 Chenopodium quinoa HOM05D000308 ORTHO05D000194 4.2e-08 62.4 99 39.4
RcHm_v2.0_Chr5g0075111 Rosa chinensis HOM05D009327 ORTHO05D011487 5.5e-08 62.0 132 35.6
AL8G31680 Arabidopsis lyrata HOM05D011809 ORTHO05D013957 7.2e-08 61.6 120 39.2
AL8G31730 Arabidopsis lyrata HOM05D011809 ORTHO05D013957 7.2e-08 61.6 120 39.2
Carub.0008s1642 Capsella rubella HOM05D011809 ORTHO05D013957 9.5e-08 61.2 116 37.1
SalBow1G7619 Salvia bowleyana HOM05D000805 ORTHO05D000624 9.5e-08 61.2 108 36.1
ATR0585G036 Amborella trichopoda HOM05D000805 ORTHO05D000624 1.6e-07 60.5 146 32.2
CARHR075360 Cardamine hirsuta HOM05D000805 ORTHO05D000624 1.6e-07 60.5 104 39.4
unitig_88.g27779 Utricularia gibba HOM05D000805 ORTHO05D000624 2.1e-07 60.1 121 33.9
Migut.K01392 Erythranthe guttata HOM05D000805 ORTHO05D000624 1.0e-06 57.8 110 33.6
SGA_v2.0_scaffold224G42985 Striga asiatica HOM05D000805 ORTHO05D000624 1.0e-06 57.8 110 31.8
FvH4_6g51310 Fragaria vesca HOM05D000805 ORTHO05D000624 1.8e-06 57.0 116 34.5
Actinidia33335 Actinidia chinensis HOM05D000805 ORTHO05D000624 2.3e-06 56.6 140 30.7
AT3G01570 Arabidopsis thaliana HOM05D000805 ORTHO05D000624 2.3e-06 56.6 152 31.6
Prupe.3G045600 Prunus persica HOM05D000250 ORTHO05D000625 2.3e-06 56.6 118 42.4
FAN09G0766 Fragaria x ananassa HOM05D000805 ORTHO05D000624 3.0e-06 56.2 116 34.5
FAN14G3163 Fragaria x ananassa HOM05D000805 ORTHO05D000624 3.0e-06 56.2 116 34.5
Sp3g00480 Schrenkiella parvula HOM05D000805 ORTHO05D000624 3.0e-06 56.2 128 34.4
TAR374G0719 Trochodendron aralioides HOM05D000805 ORTHO05D000624 3.0e-06 56.2 115 36.5
unitig_32.g10672 Utricularia gibba HOM05D000805 ORTHO05D000624 3.0e-06 56.2 121 31.4
AL3G10580 Arabidopsis lyrata HOM05D000805 ORTHO05D000624 5.2e-06 55.5 128 33.6
EL10Ac5g10685 Beta vulgaris HOM05D000805 ORTHO05D000624 5.2e-06 55.5 121 33.9
Thhalv10021571m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 5.2e-06 55.5 138 33.3
FAN05G1542 Fragaria x ananassa HOM05D000805 ORTHO05D000624 5.2e-06 55.5 116 33.6
HanXRQChr15g0475351 Helianthus annuus HOM05D000805 ORTHO05D000624 5.2e-06 55.5 131 30.5
Carub.0003s0050 Capsella rubella HOM05D000805 ORTHO05D000624 6.8e-06 55.1 128 32.8
PGR142G4011 Punica granatum HOM05D000805 ORTHO05D000624 6.8e-06 55.1 113 32.7
C03p39560 Brassica napus HOM05D000001 ORTHO05D000003 8.8e-06 54.7 104 35.6
BolC3t16223H Brassica oleracea HOM05D000001 ORTHO05D000003 8.8e-06 54.7 104 35.6
Cfa007378 Carpinus fangiana HOM05D000805 ORTHO05D000624 8.8e-06 54.7 144 29.9


User provided reference genes

Program Settings