Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 8.9e-148 526.9 272 100.0
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 2.6e-78 296.2 273 60.8
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 2.8e-77 292.7 270 60.0
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 4.0e-39 166.0 272 41.9
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.7e-35 153.3 286 40.2
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 8.6e-34 148.3 216 45.4
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 2.7e-27 126.7 263 37.6
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 8.7e-26 121.7 273 35.9
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 9.6e-25 118.2 261 37.2
vmacro09646 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 3.6e-24 116.3 263 35.4
Actinidia35403 Actinidia chinensis HOM05D005863 ORTHO05D003355 1.2e-22 111.3 267 34.8
Thecc.07G012300 Theobroma cacao HOM05D005863 ORTHO05D003355 7.1e-20 102.1 199 38.2
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.2e-19 101.3 238 36.6
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.9e-17 94.0 170 36.5
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 5.6e-17 92.4 172 39.5
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 4.8e-16 89.4 230 31.3
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 1.8e-15 87.4 239 33.1
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 9.0e-15 85.1 215 33.5
Ca_02000_v3 Cicer arietinum L. HOM05D005863 ORTHO05D003355 9.0e-15 85.1 228 31.6
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 2.6e-14 83.6 233 29.2
COL.COLO4_09843 Corchorus olitorius HOM05D005863 ORTHO05D003355 2.4e-12 77.0 117 41.0
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 3.2e-12 76.6 235 34.5
ClCG09G021400 Citrullus lanatus HOM05D031146 ORTHO05D003355 5.5e-12 75.9 228 31.6
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 2.7e-11 73.6 283 26.9
Manes.02G222900 Manihot esculenta HOM05D005863 ORTHO05D003355 3.5e-11 73.2 245 30.2
Hund23103 Selenicereus undatus HOM05D005863 ORTHO05D003355 4.6e-11 72.8 244 30.7
DCAR_001919 Daucus carota HOM05D005863 ORTHO05D003355 7.9e-11 72.0 166 33.7
Duzib213G0291 Durio zibethinus HOM05D005863 ORTHO05D003355 3.0e-10 70.1 195 33.8
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 3.0e-10 70.1 278 28.4
TWI38G1195 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 3.0e-10 70.1 124 34.7
Cc05_g15010 Coffea canephora HOM05D005863 ORTHO05D003355 6.7e-10 68.9 221 31.7
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 1.1e-09 68.2 256 31.2
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 1.5e-09 67.8 117 35.9
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 1.5e-09 67.8 193 38.3
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 1.9e-09 67.4 193 32.6
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 2.5e-09 67.0 267 26.6
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 1.6e-08 64.3 226 27.9
Nitab4.5_0006876g0020 Nicotiana tabacum HOM05D005863 ORTHO05D003355 2.8e-08 63.5 241 29.0
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 4.8e-08 62.8 105 39.0
MELO3C024948.2 Cucumis melo HOM05D031146 ORTHO05D003355 6.2e-08 62.4 221 30.3
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 8.1e-08 62.0 194 30.9
Phvul.009G242100 Phaseolus vulgaris HOM05D005863 ORTHO05D003355 1.1e-07 61.6 243 25.1
CsaV3_7G011440 Cucumis sativus L. HOM05D031146 ORTHO05D003355 1.8e-07 60.8 231 29.9
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 1.8e-07 60.8 194 30.9
Sed0025324 Sechium edule HOM05D031146 ORTHO05D003355 2.4e-07 60.5 196 32.1
Nitab4.5_0001159g0240 Nicotiana tabacum HOM05D005863 ORTHO05D003355 3.1e-07 60.1 241 27.8
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 6.9e-07 58.9 193 30.6
Sabra07G0084200 Salix brachista HOM05D005863 ORTHO05D003355 1.5e-06 57.8 263 27.0
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 2.6e-06 57.0 194 32.0
FAN19G1520 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.4e-06 56.6 147 34.0
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 3.4e-06 56.6 164 29.3
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 4.5e-06 56.2 200 28.0
EL10Ac4g07554 Beta vulgaris HOM05D038882 ORTHO05D003355 4.5e-06 56.2 160 30.6
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 4.5e-06 56.2 147 34.0
FAN26G0704 Fragaria x ananassa HOM05D014719 ORTHO05D003355 4.5e-06 56.2 158 33.5
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 5.8e-06 55.8 126 33.3
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 5.8e-06 55.8 90 38.9


User provided reference genes

Program Settings