Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 9.9e-166 587.4 484 100.0
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 8.8e-138 494.6 488 86.9
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 8.6e-93 345.1 483 70.4
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 6.8e-90 335.5 481 71.9
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 4.6e-86 322.8 472 66.5
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 2.5e-84 317.0 464 61.0
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 9.2e-79 298.5 481 62.8
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 2.1e-78 297.4 472 72.7
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 1.3e-77 294.7 472 61.9
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 1.7e-77 294.3 474 66.9
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 3.9e-77 293.1 469 71.0
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 1.1e-76 291.6 471 61.4
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 8.1e-75 285.4 484 55.6
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 6.8e-74 282.3 472 70.3
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 4.4e-73 279.6 464 53.2
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.7e-72 277.7 468 63.7
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 2.9e-72 276.9 464 50.2
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 4.1e-71 273.1 435 75.6
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 1.0e-69 268.5 465 64.9
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 1.7e-69 267.7 448 62.5
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.1e-68 265.0 438 73.1
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 1.1e-66 258.5 481 61.1
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 1.7e-64 251.1 473 45.7
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 2.9e-64 250.4 471 56.3
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 1.9e-63 247.7 470 56.6
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 3.2e-63 246.9 470 56.0
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 5.4e-63 246.1 473 60.3
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 7.1e-63 245.7 470 55.7
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 2.7e-62 243.8 470 55.7
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 2.3e-61 240.7 470 55.7
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 8.7e-61 238.8 445 53.3
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 2.5e-60 237.3 476 56.7
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 2.1e-59 234.2 474 62.2
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 2.8e-59 233.8 455 45.5
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 6.2e-59 232.6 477 59.7
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 8.1e-59 232.3 488 58.2
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 4.0e-58 229.9 489 60.1
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 5.8e-57 226.1 488 58.4
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 7.6e-57 225.7 470 59.4
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 9.9e-57 225.3 467 60.4
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 8.4e-56 222.2 475 59.8
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 8.4e-56 222.2 448 58.7
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 1.9e-55 221.1 465 67.1
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 5.4e-55 219.5 475 59.8
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 2.1e-54 217.6 469 47.5
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 3.5e-54 216.9 467 65.1
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 1.7e-53 214.5 467 64.2
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 1.5e-52 211.5 474 57.4
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 4.3e-52 209.9 465 56.1
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 4.3e-52 209.9 477 57.0
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 3.6e-51 206.8 474 57.0
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 4.8e-51 206.5 452 59.7
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 1.8e-50 204.5 465 55.5
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 1.8e-50 204.5 474 57.4
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 1.8e-50 204.5 474 57.4
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 4.0e-50 203.4 475 58.9
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 6.9e-50 202.6 469 44.1
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 9.0e-50 202.2 358 53.4
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 4.5e-49 199.9 473 31.1
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 1.3e-48 198.4 338 57.1
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 1.3e-48 198.4 450 58.9
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 3.8e-48 196.8 465 56.1
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 3.8e-48 196.8 450 59.1
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 4.9e-48 196.4 450 59.1
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 5.4e-47 193.0 376 64.6
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 1.6e-46 191.4 173 57.2
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 4.6e-46 189.9 449 46.1
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 1.0e-45 188.7 438 58.7
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 1.1e-39 168.7 440 58.9
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 5.5e-39 166.4 169 52.1
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 1.2e-38 165.2 313 58.1
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 6.0e-38 162.9 345 32.2
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 3.0e-37 160.6 458 52.4
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 3.0e-37 160.6 338 33.7
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 3.9e-37 160.2 345 49.0
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 6.2e-35 152.9 471 50.3
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.5e-33 148.3 207 44.9
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 8.7e-29 132.5 176 47.2
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 1.0e-21 109.0 146 43.2
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 2.2e-19 101.3 338 50.0
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 1.5e-17 95.1 74 62.2
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 4.4e-12 77.0 50 76.0


User provided reference genes

Program Settings