Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 1.7e-70 269.2 135 100.0
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.7e-35 152.9 111 72.1
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 5.6e-34 147.9 112 71.4
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 2.1e-25 119.4 105 63.8
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 2.8e-25 119.0 114 60.5
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 2.8e-25 119.0 117 54.7
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 8.1e-25 117.5 117 58.1
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 8.1e-25 117.5 118 56.8
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 8.1e-25 117.5 117 58.1
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 1.1e-24 117.1 127 53.5
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.4e-24 116.7 115 57.4
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 2.4e-24 115.9 113 58.4
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 4.0e-24 115.2 120 56.7
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 9.0e-24 114.0 104 61.5
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 2.6e-23 112.5 114 56.1
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 4.5e-23 111.7 117 55.6
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 7.6e-23 110.9 117 56.4
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 7.6e-23 110.9 123 55.3
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 1.7e-22 109.8 111 55.9
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.8e-22 108.6 113 55.8
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 3.8e-22 108.6 117 53.8
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 3.8e-22 108.6 105 59.0
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.1e-21 107.1 120 52.5
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 3.2e-21 105.5 114 53.5
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 5.4e-21 104.8 115 50.4
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.2e-20 103.6 124 57.3
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 2.7e-20 102.4 118 50.8
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.7e-20 102.4 122 53.3
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 6.0e-20 101.3 113 54.0
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 7.9e-20 100.9 121 54.5
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.0e-19 100.5 114 55.3
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.0e-19 100.5 121 52.9
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 1.3e-19 100.1 122 52.5
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.3e-19 100.1 114 50.0
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.8e-19 99.8 114 55.3
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 2.3e-19 99.4 100 60.0
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 2.3e-19 99.4 110 54.5
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 2.3e-19 99.4 110 54.5
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.7e-19 97.8 114 51.8
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 6.7e-19 97.8 120 50.0
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 1.5e-18 96.7 117 47.0
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.9e-18 96.3 105 50.5
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.5e-18 95.9 112 53.6
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 2.8e-17 92.4 131 44.3
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 2.8e-17 92.4 115 50.4
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.8e-17 92.4 110 48.2
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 1.4e-16 90.1 118 46.6
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 3.1e-16 89.0 113 49.6
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 4.0e-16 88.6 121 43.0
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 5.3e-16 88.2 126 49.2
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.5e-15 86.7 105 49.5
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 3.4e-15 85.5 118 45.8
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 3.4e-15 85.5 121 41.3
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 9.9e-15 84.0 105 48.6
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 9.9e-15 84.0 121 41.3
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 1.3e-14 83.6 111 45.9
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.3e-14 83.6 111 45.9
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.3e-14 83.6 111 45.9
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 1.7e-14 83.2 98 51.0
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 1.7e-14 83.2 112 43.8
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 2.9e-14 82.4 113 44.2
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 4.9e-14 81.6 121 48.8
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 4.9e-14 81.6 111 45.0
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 4.9e-14 81.6 111 45.0
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 6.4e-14 81.3 120 45.8
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 8.4e-14 80.9 110 44.5
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.4e-13 80.1 113 42.5
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 1.9e-13 79.7 106 46.2
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 2.4e-13 79.3 108 43.5
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 4.2e-13 78.6 88 52.3
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 9.3e-13 77.4 123 44.7
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 2.7e-12 75.9 113 45.1
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.7e-12 75.9 121 44.6
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 7.9e-12 74.3 121 43.0
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 1.0e-11 73.9 112 42.9
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 1.3e-11 73.6 124 43.5
EL10Ac4g07765 Beta vulgaris HOM05D005193 ORTHO05D006316 1.3e-11 73.6 112 38.4
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 3.0e-11 72.4 102 45.1
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 6.7e-11 71.2 117 35.9
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 8.7e-11 70.9 69 56.5
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 5.6e-10 68.2 85 45.9
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 7.4e-10 67.8 93 45.2
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 6.9e-08 61.2 105 41.0
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 6.9e-08 61.2 76 51.3
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 9.0e-08 60.8 77 46.8
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 9.0e-08 60.8 77 46.8
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 7.6e-07 57.8 174 31.6
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 3.8e-06 55.5 92 40.2
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 6.5e-06 54.7 58 51.7
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 8.4e-06 54.3 73 41.1


User provided reference genes

Program Settings