Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 8.6e-243 843.2 417 100.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 2.7e-188 662.1 340 96.2
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 6.3e-161 571.2 367 79.0
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 9.8e-154 547.4 380 74.7
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 8.9e-139 497.7 336 70.8
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 1.5e-138 496.9 335 69.9
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.4e-136 490.3 331 70.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 4.1e-136 488.8 339 69.6
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 4.6e-135 485.3 340 68.5
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 6.0e-135 485.0 334 69.8
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.1e-133 480.7 340 67.4
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 1.6e-132 476.9 359 64.9
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 5.2e-131 471.9 333 67.3
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 8.9e-131 471.1 356 64.9
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 9.9e-130 467.6 358 64.0
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.3e-129 467.2 333 66.7
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 2.9e-129 466.1 340 65.0
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 6.4e-129 464.9 334 66.2
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 1.1e-128 464.2 331 67.7
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 9.2e-128 461.1 340 65.3
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.6e-127 460.3 336 65.2
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.0e-126 456.1 335 67.2
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 3.0e-126 456.1 340 64.7
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 5.1e-126 455.3 391 60.1
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 7.3e-125 451.4 336 64.9
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 9.6e-125 451.1 392 58.9
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 3.6e-124 449.1 336 63.7
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.0e-123 445.7 357 63.3
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 4.4e-122 442.2 347 62.8
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 1.7e-121 440.3 336 64.3
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 2.2e-121 439.9 336 64.0
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 4.9e-121 438.7 335 62.7
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 8.4e-121 438.0 334 62.6
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 9.3e-120 434.5 360 61.7
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 6.0e-119 431.8 336 63.4
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 3.9e-118 429.1 392 56.9
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 2.5e-117 426.4 336 64.0
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 2.5e-117 426.4 336 62.8
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 4.3e-117 425.6 333 63.4
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 2.1e-116 423.3 340 61.5
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 4.8e-116 422.2 303 67.7
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 8.1e-116 421.4 332 61.1
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 8.1e-116 421.4 335 62.7
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 1.8e-115 420.2 320 63.8
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 1.8e-115 420.2 332 60.2
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.3e-115 418.7 331 60.1
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 2.9e-113 412.9 362 60.2
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 1.1e-112 411.0 341 60.4
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.4e-112 410.6 333 61.3
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.9e-112 410.2 340 60.6
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 4.2e-112 409.1 331 58.9
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 7.1e-112 408.3 331 58.9
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.7e-111 406.4 339 59.6
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 3.5e-111 406.0 362 58.6
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 6.0e-111 405.2 341 59.5
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.3e-110 404.1 341 59.8
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 3.0e-110 402.9 328 59.5
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 3.9e-110 402.5 335 60.9
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.1e-109 401.0 369 57.7
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 1.1e-109 401.0 362 57.2
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 2.5e-109 399.8 361 54.8
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 3.3e-109 399.4 360 57.8
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 9.6e-109 397.9 257 73.9
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 1.3e-108 397.5 328 60.4
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 2.1e-108 396.7 338 58.6
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 4.8e-108 395.6 337 58.2
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 6.2e-108 395.2 309 64.1
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 4.0e-107 392.5 338 59.5
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 1.5e-106 390.6 329 57.1
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 9.9e-106 387.9 342 57.0
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 6.4e-105 385.2 358 55.6
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 8.4e-105 384.8 286 65.4
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.4e-104 384.0 359 55.7
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 5.5e-104 382.1 345 55.9
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 2.7e-103 379.8 327 56.6
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 3.9e-102 375.9 266 68.4
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.6e-100 370.5 325 58.8
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 6.2e-100 368.6 356 54.5
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.4e-99 367.5 287 63.8
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 6.9e-99 365.2 334 54.2
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.2e-98 364.4 257 70.8
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 4.6e-95 352.4 292 61.0
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 5.7e-93 345.5 295 58.3
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 7.4e-93 345.1 290 56.9
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 3.1e-91 339.7 329 54.1
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 2.0e-90 337.0 292 58.2
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 6.5e-89 332.0 359 48.2
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.1e-88 331.3 237 67.5
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.3e-86 324.3 257 62.3
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 6.3e-84 315.5 285 54.7
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 8.2e-84 315.1 296 56.8
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 5.5e-80 302.4 268 57.1
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 7.2e-72 275.4 336 46.1
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.2e-65 253.8 317 43.2
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.8e-62 244.2 215 57.2
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 2.8e-60 236.9 217 57.1
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.5e-56 224.6 285 44.2
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 5.2e-54 216.1 201 57.2
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 4.4e-53 213.0 182 59.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 5.0e-49 199.5 363 35.8
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 4.0e-46 189.9 354 36.2
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 5.0e-41 172.9 200 45.0
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.2e-34 151.8 308 32.8
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 2.3e-33 147.5 236 39.4
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.9e-24 117.9 133 46.6
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 4.3e-24 116.7 92 57.6
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 6.2e-15 86.3 101 45.5
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 8.1e-15 85.9 69 66.7
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 1.1e-11 75.5 94 41.5
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 2.4e-11 74.3 75 44.0
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.2e-10 72.0 67 53.7
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 2.1e-10 71.2 70 50.0


User provided reference genes

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