Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 3.6e-302 1040.8 527 100.0
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 8.6e-272 939.9 560 87.9
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 5.5e-170 601.7 535 63.2
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 3.6e-153 545.8 533 60.4
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 6.0e-116 422.2 542 47.8
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 7.6e-111 405.2 529 47.1
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 2.9e-110 403.3 514 48.4
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 4.9e-110 402.5 529 48.0
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 4.6e-108 396.0 530 47.0
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 1.5e-106 391.0 545 45.1
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.8e-104 384.0 527 46.9
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 1.5e-103 380.9 532 46.4
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 2.0e-103 380.6 530 45.3
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 2.6e-103 380.2 544 43.6
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 5.8e-103 379.0 532 46.1
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 4.9e-102 375.9 530 45.7
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 7.1e-101 372.1 530 45.1
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 3.5e-100 369.8 540 43.9
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 2.5e-98 363.6 535 44.3
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 3.3e-98 363.2 533 44.5
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 3.7e-97 359.8 530 44.9
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.8e-97 359.4 524 45.6
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 8.2e-97 358.6 573 44.7
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 1.8e-96 357.5 545 44.8
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 2.4e-96 357.1 528 44.7
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 3.1e-96 356.7 557 42.4
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 4.1e-96 356.3 579 42.0
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.2e-95 354.8 557 42.2
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.5e-95 354.4 530 44.7
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 7.6e-95 352.1 571 42.9
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.3e-91 340.5 615 39.2
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 6.7e-91 339.0 571 42.0
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 1.3e-89 334.7 474 45.4
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 3.7e-89 333.2 512 44.5
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 1.4e-88 331.3 524 42.7
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 6.1e-84 315.8 661 36.6
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.3e-83 313.9 585 40.0
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.0e-83 313.5 413 47.0
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 3.0e-83 313.5 531 42.2
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 3.0e-83 313.5 533 40.7
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 2.0e-82 310.8 547 40.4
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 3.3e-82 310.1 602 38.2
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.2e-81 307.4 481 42.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.1e-80 305.1 547 41.1
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 5.3e-80 302.8 569 39.0
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 2.6e-79 300.4 521 40.7
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 7.7e-79 298.9 491 41.8
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.0e-78 298.5 403 45.9
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 3.8e-78 296.6 542 41.9
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 1.1e-77 295.0 436 43.8
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 1.9e-77 294.3 403 45.4
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 9.4e-77 292.0 364 48.1
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 3.6e-76 290.0 535 40.9
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.0e-75 288.5 373 48.0
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 3.9e-75 286.6 537 41.0
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 8.8e-75 285.4 538 39.6
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 2.0e-74 284.3 414 43.7
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 2.6e-74 283.9 596 39.6
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 3.3e-74 283.5 522 38.3
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.7e-73 281.2 525 37.9
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.7e-73 280.0 493 41.6
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 4.8e-73 279.6 517 37.7
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 1.1e-72 278.5 588 37.2
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 1.4e-72 278.1 543 38.1
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 3.1e-72 276.9 525 36.6
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 4.1e-72 276.6 538 38.3
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 4.1e-72 276.6 553 37.4
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.2e-71 275.0 414 44.9
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 2.0e-71 274.2 530 37.5
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 3.5e-71 273.5 525 38.1
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 7.7e-71 272.3 529 37.4
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 1.0e-70 271.9 489 40.5
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.0e-67 261.9 361 47.4
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 6.7e-67 259.2 511 37.4
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.6e-66 257.3 619 33.8
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 5.7e-66 256.1 629 36.4
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.7e-65 254.6 594 33.5
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 3.7e-65 253.4 415 37.8
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 4.8e-65 253.1 368 42.9
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 4.8e-65 253.1 526 35.9
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 6.3e-65 252.7 417 40.3
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 6.3e-65 252.7 534 38.4
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 8.2e-65 252.3 530 37.9
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 1.4e-64 251.5 485 37.1
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.2e-63 248.4 487 37.4
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 2.0e-63 247.7 402 39.3
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 1.3e-62 245.0 540 37.6
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.9e-61 241.1 531 36.9
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 3.6e-60 236.9 540 37.2
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.2e-58 231.9 530 36.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.6e-55 221.5 564 34.2
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 3.5e-55 220.3 538 34.6
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.1e-53 215.3 582 31.6
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.1e-52 211.1 574 32.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.4e-51 208.4 496 33.3
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 2.3e-51 207.6 561 32.3
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 3.0e-51 207.2 693 31.2
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.4e-50 203.8 546 32.4
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 9.2e-48 195.7 389 35.7
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.7e-47 194.1 285 44.2
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 2.3e-46 191.0 640 31.1
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 2.3e-46 191.0 640 31.1
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 9.5e-45 185.7 640 30.3
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.2e-44 185.3 640 30.8
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 2.1e-36 157.9 485 30.7
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 3.6e-36 157.1 531 29.9
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 2.0e-34 151.4 535 30.1
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 2.6e-34 151.0 694 26.9
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 7.0e-32 142.9 497 29.8
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 8.1e-28 129.4 537 29.4
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 8.9e-27 125.9 224 37.5
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.5e-26 125.2 234 36.3
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 1.3e-25 122.1 556 28.1
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 3.1e-19 100.9 218 33.9
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 4.1e-16 90.5 91 56.0
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 2.8e-12 77.8 67 55.2
AUR62041984 Chenopodium quinoa HOM05D006489 ORTHO05D007556 1.7e-06 58.5 88 37.5


User provided reference genes

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