Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 7.2e-53 210.3 105 100.0
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 3.6e-28 128.3 70 94.3
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.4e-16 89.0 45 97.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 5.9e-15 84.3 45 91.1
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 88.9
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 7.7e-15 84.0 45 91.1
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.0e-14 83.6 46 84.8
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 1.0e-14 83.6 45 88.9
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.3e-14 83.2 45 88.9
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.3e-14 83.2 45 88.9
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 1.3e-14 83.2 45 86.7
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 86.7
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 88.9
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 88.9
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 88.9
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 88.9
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.7e-14 82.8 46 87.0
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.7e-14 82.8 45 88.9
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 2.2e-14 82.4 45 86.7
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 2.2e-14 82.4 45 86.7
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 2.2e-14 82.4 45 88.9
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 88.9
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 88.9
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 88.9
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 88.9
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 88.9
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.9e-14 82.0 45 84.4
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 86.7
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 84.4
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 88.9
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 88.9
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 86.7
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 3.8e-14 81.6 45 86.7
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 86.7
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 86.7
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 88.9
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 88.9
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 88.9
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 5.0e-14 81.3 48 79.2
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 5.0e-14 81.3 45 84.4
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 6.5e-14 80.9 45 86.7
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 6.5e-14 80.9 45 86.7
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 6.5e-14 80.9 45 86.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 6.5e-14 80.9 45 86.7
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 6.5e-14 80.9 45 88.9
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 88.9
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 86.7
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 86.7
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 88.9
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 84.4
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 86.7
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 86.7
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 8.5e-14 80.5 45 86.7
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.1e-13 80.1 45 86.7
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.5e-13 79.7 45 86.7
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.5e-13 79.7 45 84.4
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 1.9e-13 79.3 45 84.4
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 2.5e-13 79.0 45 84.4
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 2.5e-13 79.0 45 84.4
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 82.2
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 3.2e-13 78.6 45 84.4
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 3.2e-13 78.6 54 72.2
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 4.2e-13 78.2 45 84.4
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 5.5e-13 77.8 45 84.4
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 5.5e-13 77.8 45 84.4
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 5.5e-13 77.8 45 80.0
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 7.2e-13 77.4 43 83.7
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 9.5e-13 77.0 45 77.8
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 9.5e-13 77.0 42 88.1
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 9.5e-13 77.0 45 80.0
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.2e-12 76.6 43 86.0
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.2e-12 76.6 41 90.2
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 1.6e-12 76.3 44 81.8
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 2.1e-12 75.9 45 82.2
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 2.1e-12 75.9 45 82.2
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 2.1e-12 75.9 45 80.0
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 2.1e-12 75.9 45 77.8
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 2.7e-12 75.5 45 77.8
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 2.7e-12 75.5 47 78.7
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 4.7e-12 74.7 45 75.6
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 4.7e-12 74.7 45 75.6
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 6.1e-12 74.3 42 83.3
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 6.1e-12 74.3 41 85.4
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 6.1e-12 74.3 41 85.4
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 6.1e-12 74.3 45 80.0
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.4e-11 73.2 45 77.8
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.4e-11 73.2 45 77.8
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 1.4e-11 73.2 43 79.1
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 1.4e-11 73.2 43 79.1
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.8e-11 72.8 43 81.4
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 4.0e-11 71.6 45 75.6
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 5.2e-11 71.2 45 75.6
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 5.2e-11 71.2 44 77.3
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 5.2e-11 71.2 43 79.1
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.8e-11 70.9 45 73.3
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.6e-10 68.9 45 80.0
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.6e-10 68.9 45 80.0
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.6e-10 68.9 45 80.0
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.6e-10 68.9 45 80.0
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 4.4e-10 68.2 45 73.3
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 2.2e-09 65.9 51 68.6
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 2.2e-09 65.9 45 73.3
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 3.7e-09 65.1 45 68.9
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 4.1e-08 61.6 45 73.3
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.7e-07 58.9 45 71.1
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 4.5e-07 58.2 49 61.2
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.3e-06 55.8 30 90.0


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