Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 5.0e-188 661.0 342 100.0
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 8.5e-180 633.6 342 95.6
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.7e-141 505.8 347 79.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 2.3e-140 502.7 344 78.8
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.1e-139 500.4 344 78.5
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.9e-124 448.7 349 70.5
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 5.6e-123 444.9 348 68.4
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 9.6e-123 444.1 348 70.1
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 3.1e-121 439.1 346 67.9
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 6.9e-121 438.0 346 69.1
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 8.4e-119 431.0 345 68.1
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 2.7e-117 426.0 347 69.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.3e-116 422.9 348 66.4
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 3.9e-116 422.2 348 66.7
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 3.9e-116 422.2 348 66.1
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 1.5e-115 420.2 347 66.0
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 9.6e-115 417.5 351 65.8
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 2.1e-114 416.4 346 65.3
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 3.7e-114 415.6 348 66.4
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 6.2e-114 414.8 346 64.2
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.4e-113 413.7 347 66.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 9.9e-112 407.5 345 64.1
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 4.9e-111 405.2 348 64.1
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.1e-110 404.1 349 63.6
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.4e-110 402.9 348 63.8
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 5.5e-110 401.7 349 65.3
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 7.1e-110 401.4 348 64.1
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 9.3e-110 401.0 346 65.0
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.2e-109 400.6 331 65.9
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 2.1e-109 399.8 342 64.6
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.7e-109 399.4 348 63.2
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 4.6e-109 398.7 354 62.7
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 7.9e-109 397.9 346 64.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 3.9e-108 395.6 348 64.1
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 5.1e-108 395.2 345 62.3
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.9e-107 393.3 342 62.6
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.5e-107 392.9 340 63.5
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 3.7e-106 389.0 342 62.0
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 8.2e-106 387.9 345 61.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.1e-105 387.5 345 61.2
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 3.1e-105 386.0 345 61.2
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 4.0e-105 385.6 347 60.5
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 4.0e-105 385.6 347 60.5
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 2.6e-104 382.9 349 61.6
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 2.6e-104 382.9 344 61.6
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 1.0e-103 380.9 346 61.8
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 2.2e-103 379.8 356 59.3
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 4.9e-103 378.6 346 61.0
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 6.5e-103 378.3 350 60.0
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.1e-102 377.5 344 62.2
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.4e-102 377.1 291 68.0
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.9e-102 376.7 345 61.2
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.9e-102 376.7 346 59.5
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.5e-102 376.3 347 60.5
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 3.2e-102 375.9 346 61.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 7.1e-102 374.8 343 60.6
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 9.3e-102 374.4 348 57.5
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 3.5e-101 372.5 352 59.1
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 4.6e-101 372.1 354 60.2
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 3.0e-100 369.4 348 60.9
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 3.9e-100 369.0 355 59.4
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 5.1e-100 368.6 346 60.7
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 6.7e-100 368.2 269 72.9
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.5e-99 367.1 344 60.8
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 4.8e-98 362.1 350 58.9
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 2.4e-97 359.8 284 66.2
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 9.0e-97 357.8 274 70.1
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 6.7e-92 341.7 347 56.2
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.9e-91 340.1 343 56.9
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 7.4e-91 338.2 349 55.3
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 7.4e-91 338.2 348 57.2
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 9.7e-91 337.8 275 63.6
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.3e-90 337.4 349 55.9
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.3e-90 337.4 313 61.0
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 6.3e-90 335.1 344 56.4
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 1.5e-88 330.5 345 55.9
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.0e-88 330.1 345 55.7
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.7e-87 327.0 344 55.2
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.7e-87 327.0 344 55.2
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.7e-87 327.0 296 60.5
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 8.5e-87 324.7 349 55.9
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 8.5e-87 324.7 282 58.5
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 1.1e-86 324.3 352 54.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.9e-86 323.6 348 55.2
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 9.4e-86 321.2 348 56.6
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 4.5e-80 302.4 350 52.6
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 3.0e-76 289.7 289 58.8
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 1.6e-72 277.3 339 48.7
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 3.6e-69 266.2 204 65.7
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 3.2e-62 243.0 310 47.4
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 3.6e-61 239.6 299 44.8
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 3.1e-57 226.5 183 61.2
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 4.1e-57 226.1 232 56.0
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 2.3e-52 210.3 132 75.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 1.5e-46 191.0 266 39.8
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 3.0e-44 183.3 121 72.7
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 3.7e-34 149.8 272 37.1
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 2.7e-32 143.7 114 67.5
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 2.3e-31 140.6 272 33.8
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 7.3e-30 135.6 241 43.2
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 2.9e-26 123.6 131 50.4
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.7e-26 123.2 234 41.5
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 7.8e-24 115.5 114 56.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.8e-18 96.7 267 29.2
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 1.7e-10 71.2 103 37.9
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 7.8e-08 62.4 322 24.2


User provided reference genes

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