Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 8.1e-269 929.9 482 100.0
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.2e-235 819.7 485 91.5
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.3e-141 507.3 488 62.1
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 3.6e-107 392.9 453 56.1
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 2.2e-96 357.1 451 50.8
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 1.8e-95 354.0 450 52.0
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 9.1e-87 325.1 472 47.5
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 4.7e-83 312.8 442 49.3
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 4.1e-79 299.7 485 44.5
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 4.5e-78 296.2 446 46.2
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.3e-77 293.9 464 45.9
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.3e-77 293.9 486 43.4
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 8.6e-77 292.0 436 47.5
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.3e-76 290.0 462 46.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 7.3e-76 288.9 465 45.2
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 9.5e-76 288.5 448 46.4
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 3.6e-75 286.6 416 46.2
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.3e-74 283.9 463 46.4
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.2e-73 281.6 437 47.1
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 1.2e-73 281.6 478 41.8
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.9e-72 276.9 456 44.1
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.9e-72 276.9 425 45.2
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 3.2e-71 273.5 473 42.5
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.2e-70 271.6 468 44.2
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 1.9e-68 264.2 365 49.9
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 5.6e-68 262.7 428 44.9
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 6.4e-64 249.2 433 43.0
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 8.3e-64 248.8 444 43.5
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.5e-62 243.4 444 41.7
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 7.8e-62 242.3 359 48.7
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.0e-61 241.9 373 44.5
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 8.6e-61 238.8 424 42.9
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.1e-60 238.4 430 43.7
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.5e-60 237.3 470 41.1
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 4.0e-58 229.9 521 40.5
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 1.1e-55 221.9 443 39.7
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 2.7e-54 217.2 397 44.3
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 1.5e-52 211.5 421 40.4
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 5.4e-47 193.0 455 36.0
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.6e-46 191.4 418 36.8
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 6.6e-45 186.0 431 38.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 9.6e-44 182.2 455 40.4
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 2.8e-43 180.6 453 37.5
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 2.0e-41 174.5 505 32.1
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 3.4e-41 173.7 431 37.4
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 2.9e-40 170.6 319 44.2
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 7.1e-39 166.0 566 30.9
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 7.1e-39 166.0 418 34.7
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 3.0e-37 160.6 400 35.5
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 3.3e-36 157.1 411 36.5
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 4.3e-36 156.8 585 29.6
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 8.1e-35 152.5 504 29.8
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 9.0e-34 149.1 430 34.2
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.5e-33 148.3 569 28.6
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 2.6e-33 147.5 507 31.8
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 7.1e-31 139.4 486 32.5
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.2e-30 138.7 449 31.6
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.3e-29 135.2 470 30.9
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 9.6e-28 129.0 256 39.5
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.3e-27 128.6 470 30.6
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.8e-27 127.5 458 30.1
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 1.8e-26 124.8 378 35.4
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 3.1e-26 124.0 467 28.9
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 4.0e-26 123.6 479 28.8
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 6.9e-26 122.9 493 27.4
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 3.4e-25 120.6 496 29.4
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.0e-24 119.0 323 37.2
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 1.0e-24 119.0 323 37.2
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.5e-24 116.3 256 37.1
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.1e-23 115.5 279 37.6
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 1.2e-22 112.1 395 30.6
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 6.0e-22 109.8 440 30.5
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 3.0e-21 107.5 302 32.5
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 3.0e-21 107.5 422 29.4
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 6.2e-19 99.8 335 31.6
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 2.5e-15 87.8 324 29.0
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 7.2e-15 86.3 309 31.4
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.1e-10 72.4 106 39.6
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 9.4e-07 59.3 58 48.3
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 2.7e-06 57.8 96 39.6


User provided reference genes

Program Settings