Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-163 579.7 297 100.0
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 3.1e-162 575.1 297 99.0
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.3e-139 500.0 297 86.9
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 2.2e-139 499.2 297 84.2
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.5e-137 491.5 299 85.6
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 4.1e-130 468.4 298 79.2
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 1.9e-127 459.5 299 79.3
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 4.3e-127 458.4 299 78.9
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 9.5e-127 457.2 297 79.5
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.8e-126 455.7 299 78.6
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.1e-125 453.8 297 78.5
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.1e-125 453.8 297 78.5
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 1.2e-124 450.3 297 77.1
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.5e-124 449.9 297 78.1
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 2.6e-124 449.1 299 76.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 3.4e-124 448.7 297 77.4
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 7.5e-124 447.6 297 77.1
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.7e-123 446.4 297 76.8
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.7e-123 445.3 297 78.8
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.2e-122 442.2 297 76.4
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 3.2e-122 442.2 297 76.1
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.1e-122 441.8 297 76.1
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.2e-122 440.7 297 76.8
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.2e-121 440.3 297 76.8
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.2e-121 440.3 297 75.4
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.7e-121 439.1 297 76.4
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 3.5e-121 438.7 300 75.3
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 3.5e-121 438.7 298 76.8
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 4.6e-121 438.3 297 76.8
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 4.6e-121 438.3 297 76.8
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 4.6e-121 438.3 299 76.3
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 6.0e-121 438.0 300 75.0
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 7.8e-121 437.6 297 77.1
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 7.8e-121 437.6 297 77.1
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 1.0e-120 437.2 297 74.7
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.3e-120 436.8 297 77.4
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.3e-120 436.8 297 75.4
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 1.7e-120 436.4 299 75.6
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.3e-120 436.0 297 76.1
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 2.3e-120 436.0 297 76.4
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 3.0e-120 435.6 297 76.1
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.9e-120 435.3 297 75.8
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.9e-120 435.3 297 76.1
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 8.6e-120 434.1 295 76.3
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 8.6e-120 434.1 297 75.8
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.9e-119 433.0 297 77.1
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 3.3e-119 432.2 299 73.6
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.3e-119 432.2 295 76.3
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 4.3e-119 431.8 297 77.1
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 7.3e-119 431.0 295 76.3
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 7.3e-119 431.0 297 74.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 9.5e-119 430.6 297 75.8
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 9.5e-119 430.6 297 74.7
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 9.5e-119 430.6 297 74.7
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 9.5e-119 430.6 297 74.7
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 9.5e-119 430.6 295 75.9
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.6e-118 429.9 297 73.4
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 2.1e-118 429.5 295 77.3
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 2.8e-118 429.1 295 75.6
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.8e-118 429.1 295 77.3
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 2.8e-118 429.1 292 75.0
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 2.8e-118 429.1 297 76.1
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 3.6e-118 428.7 295 75.3
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 4.7e-118 428.3 295 74.9
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 8.1e-118 427.6 298 74.5
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 8.1e-118 427.6 297 74.7
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 8.1e-118 427.6 296 75.7
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 1.4e-117 426.8 297 74.4
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.4e-117 426.8 297 74.4
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.4e-117 426.8 297 74.1
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.4e-117 426.8 297 76.1
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 2.3e-117 426.0 298 73.8
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.3e-117 426.0 297 74.4
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 4.0e-117 425.2 298 73.8
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.0e-117 425.2 295 74.6
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 5.2e-117 424.9 297 74.1
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 5.2e-117 424.9 296 73.6
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 6.8e-117 424.5 300 74.0
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-116 423.7 297 74.4
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.0e-116 422.9 299 73.6
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.0e-116 422.9 289 77.2
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 3.4e-116 422.2 284 78.9
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 4.4e-116 421.8 295 73.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 7.5e-116 421.0 289 76.8
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 9.9e-116 420.6 295 75.3
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.3e-115 420.2 297 74.4
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 1.3e-115 420.2 297 73.7
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-115 420.2 289 76.1
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 1.1e-114 417.2 295 74.9
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 4.1e-114 415.2 290 74.5
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 9.2e-114 414.1 296 73.0
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 2.1e-113 412.9 299 73.2
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 2.1e-113 412.9 295 73.2
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.6e-113 411.8 296 72.3
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.7e-112 409.8 297 73.4
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.3e-112 409.5 289 74.4
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 3.0e-112 409.1 296 72.6
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 4.3e-111 405.2 295 73.9
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 7.3e-111 404.4 295 73.6
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.2e-110 403.7 300 72.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.6e-110 402.1 296 72.3
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 6.2e-110 401.4 285 73.7
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.1e-109 400.6 295 71.5
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.1e-109 400.6 298 72.8
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.1e-109 399.1 295 71.2
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 5.2e-109 398.3 296 69.9
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 5.2e-109 398.3 296 69.9
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 1.2e-108 397.1 296 70.6
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.6e-108 396.0 302 70.5
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 5.8e-108 394.8 296 68.9
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 9.9e-108 394.0 298 69.8
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.7e-107 393.3 297 69.7
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.2e-107 392.9 296 70.6
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 3.8e-107 392.1 298 69.5
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 8.4e-107 391.0 303 69.3
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 8.4e-107 391.0 300 69.0
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 3.2e-106 389.0 301 69.8
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 9.2e-106 387.5 295 70.5
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 3.5e-105 385.6 290 70.7
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 4.6e-105 385.2 300 69.0
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 4.6e-105 385.2 301 68.1
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 7.8e-105 384.4 297 69.7
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 1.3e-104 383.6 306 67.3
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 1.7e-104 383.3 297 69.0
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 3.0e-104 382.5 292 66.8
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 3.9e-104 382.1 296 70.9
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 8.7e-104 380.9 288 70.8
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.1e-103 380.6 277 72.9
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 3.3e-103 379.0 302 67.5
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 4.7e-102 375.2 294 67.3
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 1.4e-101 373.6 301 65.8
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.8e-101 373.2 295 69.8
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.8e-101 373.2 296 69.3
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.8e-101 373.2 297 67.3
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 6.9e-101 371.3 302 67.9
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 2.6e-100 369.4 303 66.0
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 7.6e-100 367.9 305 66.6
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 6.4e-99 364.8 305 66.2
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.7e-97 359.4 294 64.6
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 1.0e-96 357.5 297 67.0
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.5e-92 343.6 296 65.5
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 1.8e-88 330.1 295 61.4
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 8.7e-88 327.8 267 64.0
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-80 304.3 250 66.8
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 6.9e-77 291.6 219 72.1
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 6.5e-75 285.0 285 53.7
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 2.8e-70 269.6 199 73.4
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 6.9e-69 265.0 286 52.1
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.0e-67 261.2 285 51.2
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 9.1e-61 238.0 287 47.4
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 1.2e-60 237.7 282 51.4
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 3.8e-59 232.6 144 80.6
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 7.2e-58 228.4 273 50.2
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 4.7e-49 199.1 114 91.2
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 4.7e-49 199.1 151 70.2
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 8.0e-49 198.4 170 65.9
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 1.0e-48 198.0 127 75.6
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 1.7e-46 190.7 113 89.4
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 6.1e-41 172.2 150 63.3
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 2.6e-39 166.8 99 90.9
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 2.3e-32 143.7 88 84.1
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 4.8e-30 136.0 90 85.6
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 3.5e-28 129.8 104 65.4
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 3.0e-24 116.7 72 87.5
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 2.6e-23 113.6 339 27.7
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 4.0e-16 89.7 73 60.3
TWI18G0424 Tripterygium wilfordii HOM05D005748 ORTHO05D007123 8.3e-06 55.5 157 31.8


User provided reference genes

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