Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09448 Corylus avellana HOM05D007784 ORTHO05D008654 5.9e-64 247.7 152 100.0
Cfa020564 Carpinus fangiana HOM05D007784 ORTHO05D008654 8.5e-55 217.2 139 97.8
QL08p022546 Quercus lobata HOM05D007784 ORTHO05D008654 5.2e-36 154.8 144 70.8
CiPaw.11G171500 Carya illinoinensis HOM05D007784 ORTHO05D008654 3.8e-31 138.7 129 75.2
FvH4_3g19630 Fragaria vesca HOM05D007784 ORTHO05D008654 1.4e-28 130.2 148 66.2
FAN11G2265 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.4e-28 130.2 148 66.2
FAN21G3158 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.4e-28 130.2 148 66.2
Duzib213G0720 Durio zibethinus HOM05D007784 ORTHO05D008654 5.2e-28 128.3 127 70.1
CiPaw.12G119800 Carya illinoinensis HOM05D007784 ORTHO05D008654 1.5e-27 126.7 139 71.2
Duzib268G0159 Durio zibethinus HOM05D007784 ORTHO05D008654 5.7e-27 124.8 143 63.6
Thecc.07G095100 Theobroma cacao HOM05D007784 ORTHO05D008654 9.8e-27 124.0 126 65.9
FAN16G2579 Fragaria x ananassa HOM05D007784 ORTHO05D008654 1.3e-26 123.6 88 70.5
Prupe.4G177000 Prunus persica HOM05D007784 ORTHO05D008654 1.7e-26 123.2 151 68.9
Ciclev10010505m.g Citrus clementina HOM05D007784 ORTHO05D008654 3.7e-26 122.1 131 72.5
COL.COLO4_36703 Corchorus olitorius HOM05D007784 ORTHO05D008654 6.3e-26 121.3 125 68.8
RcHm_v2.0_Chr5g0032821 Rosa chinensis HOM05D007784 ORTHO05D008654 2.4e-25 119.4 88 68.2
ClCG11G017920 Citrullus lanatus HOM05D007784 ORTHO05D008654 7.0e-25 117.9 85 75.3
FAN25G3654 Fragaria x ananassa HOM05D007784 ORTHO05D008654 9.1e-25 117.5 148 63.5
MD03G1230800 Malus domestica HOM05D007784 ORTHO05D008654 1.6e-24 116.7 147 69.4
Gohir.A01G061700 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.7e-24 115.9 123 68.3
Gohir.D01G048300 Gossypium hirsutum HOM05D007784 ORTHO05D008654 2.7e-24 115.9 123 68.3
Gorai.002G068100 Gossypium raimondii HOM05D007784 ORTHO05D008654 2.7e-24 115.9 123 68.3
MELO3C025600.2 Cucumis melo HOM05D007784 ORTHO05D008654 3.5e-24 115.5 86 73.3
Cpa.g.c36086 Carica papaya HOM05D007784 ORTHO05D008654 1.7e-23 113.2 135 65.2
CsaV3_4G033550 Cucumis sativus L. HOM05D007784 ORTHO05D008654 5.5e-22 108.2 86 72.1
CANSAT56G4083 Cannabis sativa HOM05D007784 ORTHO05D008654 7.2e-22 107.8 99 64.6
Lalb_Chr03g0030731 Lupinus albus HOM05D007784 ORTHO05D008654 2.1e-21 106.3 136 57.4
Potri.001G398000 Populus trichocarpa HOM05D007784 ORTHO05D008654 2.1e-21 106.3 134 59.7
Potri.011G116600 Populus trichocarpa HOM05D007784 ORTHO05D008654 1.0e-20 104.0 131 62.6
Atru.chr2.2433 Acer truncatum HOM05D007784 ORTHO05D008654 1.8e-20 103.2 89 66.3
PGR031G1623 Punica granatum HOM05D007784 ORTHO05D008654 4.0e-20 102.1 147 58.5
Manes.15G088900 Manihot esculenta HOM05D007784 ORTHO05D008654 5.7e-19 98.2 139 66.2
Gorai.013G169700 Gossypium raimondii HOM05D007784 ORTHO05D008654 9.8e-19 97.4 132 62.9
Gohir.D13G151926 Gossypium hirsutum HOM05D007784 ORTHO05D008654 1.7e-18 96.7 133 63.2
Sabra11G0102100 Salix brachista HOM05D007784 ORTHO05D008654 1.7e-18 96.7 128 60.2
Duzib170G0657 Durio zibethinus HOM05D007784 ORTHO05D008654 3.1e-17 92.4 120 64.2
Glyma.12G163035 Glycine max HOM05D007784 ORTHO05D008654 3.1e-17 92.4 79 62.0
MSTRG.15239 Avicennia marina HOM05D007784 ORTHO05D008654 5.4e-17 91.7 82 63.4
Manes.03G106700 Manihot esculenta HOM05D007784 ORTHO05D008654 5.4e-17 91.7 141 63.1
Glyma.06G238300 Glycine max HOM05D007784 ORTHO05D008654 7.0e-17 91.3 81 61.7
Rhsim06G0201400 Rhododendron simsii HOM05D007784 ORTHO05D008654 1.2e-16 90.5 84 60.7
Sabra16G0260800 Salix brachista HOM05D007784 ORTHO05D008654 1.6e-16 90.1 134 51.5
Hma1.2p1_0387F.1_g141980 Hydrangea macrophylla HOM05D007784 ORTHO05D008654 2.7e-16 89.4 130 47.7
Lj3g0015921 Lotus japonicus HOM05D007784 ORTHO05D008654 3.5e-16 89.0 65 70.8
Cc05_g11830 Coffea canephora HOM05D007784 ORTHO05D008654 5.9e-16 88.2 84 58.3
Dinv14932 Davidia involucrata HOM05D007784 ORTHO05D008654 5.9e-16 88.2 83 57.8
Peaxi162Scf00069g01710 Petunia axillaris HOM05D007784 ORTHO05D008654 1.0e-15 87.4 135 45.2
PGSC0003DMG400012442 Solanum tuberosum HOM05D007784 ORTHO05D008654 2.9e-15 85.9 133 60.9
Sed0023140 Sechium edule HOM05D007784 ORTHO05D008654 3.8e-15 85.5 58 75.9
Phvul.011G165000 Phaseolus vulgaris HOM05D007784 ORTHO05D008654 6.6e-15 84.7 74 62.2
CSS0002410 Camellia sinensis var. sinensis HOM05D007784 ORTHO05D008654 8.6e-15 84.3 87 56.3
VMungo1127G1039 Vigna mungo HOM05D007784 ORTHO05D008654 1.5e-14 83.6 76 60.5
Aqoxy1G02344 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 2.5e-14 82.8 130 53.1
Aqoxy5G00008 Aquilegia oxysepala HOM05D007784 ORTHO05D008654 2.5e-14 82.8 130 53.1
TPR.G18874 Trifolium pratense HOM05D007784 ORTHO05D008654 4.3e-14 82.0 127 47.2
Oeu051079.1 Olea europaea HOM05D007784 ORTHO05D008654 1.2e-13 80.5 140 48.6
Psat4g131560 Pisum sativum HOM05D007784 ORTHO05D008654 1.2e-13 80.5 122 45.9
Medtr0598s0020 Medicago truncatula HOM05D007784 ORTHO05D008654 1.6e-13 80.1 125 56.0
PSO541G4378 Papaver somniferum HOM05D007784 ORTHO05D008654 5.2e-12 75.1 78 57.7
TWI38G0880 Tripterygium wilfordii HOM05D007784 ORTHO05D008654 8.9e-12 74.3 90 56.7
AL1G61530 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 2.0e-11 73.2 68 57.4
Actinidia09697 Actinidia chinensis HOM05D007784 ORTHO05D008654 2.6e-11 72.8 78 55.1
AT1G53163 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 2.6e-11 72.8 85 54.1
THA.LOC104810461 Tarenaya hassleriana HOM05D009851 ORTHO05D008654 2.6e-11 72.8 84 54.8
CARHR090230 Cardamine hirsuta HOM05D009851 ORTHO05D008654 3.4e-11 72.4 67 58.2
Lalb_Chr01g0006591 Lupinus albus HOM05D007784 ORTHO05D008654 3.4e-11 72.4 129 48.1
AL3G27640 Arabidopsis lyrata HOM05D009851 ORTHO05D008654 5.7e-11 71.6 71 57.7
Thhalv10021913m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 5.7e-11 71.6 70 54.3
Ca_23050_v3 Cicer arietinum L. HOM05D007784 ORTHO05D008654 7.5e-11 71.2 70 55.7
Carub.0003s1490 Capsella rubella HOM05D009851 ORTHO05D008654 1.3e-10 70.5 66 56.1
PGR083G0236 Punica granatum HOM05D007784 ORTHO05D008654 1.3e-10 70.5 117 38.5
Carub.0001s4232 Capsella rubella HOM05D009851 ORTHO05D008654 2.2e-10 69.7 68 55.9
Sp3g13450 Schrenkiella parvula HOM05D009851 ORTHO05D008654 2.9e-10 69.3 66 56.1
BcaB03g11679 Brassica carinata HOM05D009851 ORTHO05D008654 8.3e-10 67.8 52 67.3
C05p51990 Brassica napus HOM05D009851 ORTHO05D008654 8.3e-10 67.8 52 67.3
Sp1g39710 Schrenkiella parvula HOM05D009851 ORTHO05D008654 1.1e-09 67.4 82 50.0
Solyc07g062960.1 Solanum lycopersicum HOM05D007784 ORTHO05D008654 1.1e-09 67.4 113 61.9
Sopen07g031150 Solanum pennellii HOM05D007784 ORTHO05D008654 1.1e-09 67.4 105 65.7
AT3G15250 Arabidopsis thaliana HOM05D009851 ORTHO05D008654 1.4e-09 67.0 71 53.5
Migut.M00785 Erythranthe guttata HOM05D007784 ORTHO05D008654 1.4e-09 67.0 75 58.7
Sc16g0007130 Simmondsia chinensis HOM05D007784 ORTHO05D008654 2.4e-09 66.2 81 53.1
BcaB06g29548 Brassica carinata HOM05D009851 ORTHO05D008654 3.2e-09 65.9 61 57.4
CAN.G162.41 Capsicum annuum HOM05D007784 ORTHO05D008654 3.2e-09 65.9 93 51.6
A05p34230 Brassica napus HOM05D009851 ORTHO05D008654 4.1e-09 65.5 52 65.4
BraA05t22243Z Brassica rapa HOM05D009851 ORTHO05D008654 4.1e-09 65.5 52 65.4
A06p01160 Brassica napus HOM05D009851 ORTHO05D008654 7.0e-09 64.7 82 50.0
BolC5t33884H Brassica oleracea HOM05D009851 ORTHO05D008654 7.0e-09 64.7 52 65.4
BcaB06g29549 Brassica carinata HOM05D009851 ORTHO05D008654 9.2e-09 64.3 58 56.9
SalBow8G3696 Salvia bowleyana HOM05D007784 ORTHO05D008654 1.2e-08 63.9 79 51.9
BcaB07g33353 Brassica carinata HOM05D009851 ORTHO05D008654 1.6e-08 63.5 83 48.2
BraA06t23343Z Brassica rapa HOM05D009851 ORTHO05D008654 1.6e-08 63.5 82 48.8
BcaC08g43508 Brassica carinata HOM05D009851 ORTHO05D008654 2.0e-08 63.2 82 47.6
C06p08940 Brassica napus HOM05D009851 ORTHO05D008654 2.0e-08 63.2 82 47.6
BolC6t35972H Brassica oleracea HOM05D009851 ORTHO05D008654 2.0e-08 63.2 82 47.6
Thhalv10012165m.g Eutrema salsugineum HOM05D009851 ORTHO05D008654 2.0e-08 63.2 82 48.8
TAR627G0175 Trochodendron aralioides HOM05D007784 ORTHO05D008654 2.0e-08 63.2 108 45.4
TAR627G0444 Trochodendron aralioides HOM05D007784 ORTHO05D008654 2.0e-08 63.2 108 45.4
CARHR043380 Cardamine hirsuta HOM05D009851 ORTHO05D008654 2.7e-08 62.8 82 47.6
Nn1g04167 Nelumbo nucifera HOM05D007784 ORTHO05D008654 4.6e-08 62.0 144 51.4
AUR62019455 Chenopodium quinoa HOM05D007784 ORTHO05D008654 1.0e-07 60.8 71 53.5
AUR62036175 Chenopodium quinoa HOM05D007784 ORTHO05D008654 1.0e-07 60.8 71 53.5
EL10Ac4g08222 Beta vulgaris HOM05D007784 ORTHO05D008654 2.3e-07 59.7 85 47.1
Nn1g06458 Nelumbo nucifera HOM05D007784 ORTHO05D008654 6.6e-07 58.2 131 38.9
DCAR_017127 Daucus carota HOM05D007784 ORTHO05D008654 3.3e-06 55.8 77 44.2
SGA_v2.0_scaffold73G24239 Striga asiatica HOM05D007784 ORTHO05D008654 7.3e-06 54.7 59 50.8


User provided reference genes

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