Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 5.5e-242 840.5 406 100.0
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 7.5e-167 590.9 387 79.1
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 1.8e-160 569.7 387 74.7
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 3.5e-156 555.4 387 72.6
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 3.3e-154 548.9 390 70.0
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 8.1e-153 544.3 387 69.5
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.8e-152 543.1 387 71.3
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.4e-152 542.7 390 69.0
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.8e-152 541.2 390 68.7
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.8e-152 541.2 387 69.8
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.4e-151 538.9 380 69.7
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 5.8e-151 538.1 387 69.5
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.9e-150 535.8 390 68.2
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.8e-150 535.4 387 70.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.9e-149 533.1 387 68.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 4.1e-149 531.9 390 67.9
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 4.1e-149 531.9 387 67.7
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.2e-148 530.4 387 68.5
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 2.7e-148 529.3 389 68.1
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 6.0e-148 528.1 387 69.3
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 7.8e-148 527.7 380 68.7
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.3e-147 526.9 380 69.7
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.3e-147 526.9 375 70.7
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 2.3e-147 526.2 404 65.3
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.0e-147 525.8 387 70.0
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 3.9e-147 525.4 380 70.0
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 1.1e-146 523.9 384 68.5
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.9e-146 523.1 390 68.2
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 2.5e-146 522.7 387 68.2
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.5e-146 522.7 387 67.2
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 4.3e-146 521.9 387 69.3
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 3.6e-145 518.8 387 67.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 4.7e-145 518.5 387 67.2
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 5.2e-144 515.0 380 68.2
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.9e-144 514.6 376 69.7
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.5e-143 513.5 387 66.9
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.3e-142 510.4 375 67.7
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.3e-142 510.4 380 67.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 1.3e-142 510.4 390 65.4
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.9e-142 509.2 380 67.4
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 2.9e-142 509.2 390 64.4
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.9e-142 509.2 380 66.6
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.4e-141 506.9 390 64.6
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 1.4e-141 506.9 388 66.0
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.9e-141 506.5 375 68.0
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.6e-140 503.4 380 65.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.6e-140 503.4 386 64.5
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.1e-140 503.1 381 67.2
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 2.7e-140 502.7 377 66.3
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 2.7e-140 502.7 380 64.7
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 3.5e-140 502.3 380 65.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 4.6e-140 501.9 380 64.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 7.8e-140 501.1 380 64.7
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.0e-139 500.7 380 64.7
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.3e-139 500.4 390 63.6
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 3.0e-139 499.2 387 64.1
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 3.0e-139 499.2 380 63.9
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 3.0e-139 499.2 380 63.7
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 3.9e-139 498.8 390 63.3
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 3.9e-139 498.8 388 65.2
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 5.1e-139 498.4 390 62.6
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 8.7e-139 497.7 390 62.8
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.1e-138 497.3 378 66.7
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.5e-138 496.9 380 64.2
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.5e-138 496.9 380 64.5
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 5.6e-138 495.0 390 62.6
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 3.6e-137 492.3 390 61.5
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 4.8e-137 491.9 377 64.7
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.4e-136 490.3 380 63.4
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 2.0e-135 486.5 380 63.9
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.2e-134 483.0 390 62.8
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 6.4e-134 481.5 415 60.0
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 7.1e-133 478.0 371 62.8
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.6e-132 476.9 380 61.6
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.1e-131 471.9 387 64.6
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 6.7e-131 471.5 380 59.5
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 3.3e-130 469.2 367 63.2
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.6e-130 467.6 376 65.4
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.2e-127 460.7 377 60.7
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.5e-127 460.3 380 60.8
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 9.9e-127 457.6 387 59.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.9e-125 453.4 397 58.9
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.6e-124 450.3 366 62.3
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.9e-122 443.4 362 60.5
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.8e-120 436.8 363 61.7
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 9.0e-120 434.5 407 58.7
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.5e-119 433.7 378 56.6
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.9e-117 426.8 359 60.4
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.1e-117 424.9 357 59.7
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 4.6e-116 422.2 390 56.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 7.2e-109 398.3 367 57.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 4.2e-93 345.9 253 66.8
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 3.7e-89 332.8 260 63.1
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.0e-83 314.7 221 67.9
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 6.3e-81 305.4 393 48.1
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.6e-68 264.2 336 39.3
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 8.3e-57 225.3 348 37.1
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 9.2e-56 221.9 330 37.9
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 2.6e-50 203.8 334 32.3
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 4.4e-50 203.0 117 80.3
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 7.5e-50 202.2 115 79.1
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.7e-47 193.7 106 83.0
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 8.3e-41 172.2 105 75.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 8.3e-41 172.2 263 32.7
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 2.7e-39 167.2 134 62.7
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 2.7e-39 167.2 134 62.7
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 3.0e-38 163.7 105 72.4
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 8.1e-28 129.0 78 75.6
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 3.5e-23 113.6 75 73.3
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.5e-15 87.0 49 77.6
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.0e-14 85.5 49 77.6
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.3e-14 85.1 50 74.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 8.1e-12 75.9 48 70.8
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.2e-10 72.0 45 73.3
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 2.6e-10 70.9 63 54.0
FAN21G2570 Fragaria x ananassa HOM05D011847 ORTHO05D013847 8.7e-06 55.8 47 57.4


User provided reference genes

Program Settings