Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 2.5e-56 222.2 147 100.0
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.5e-45 186.4 150 90.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.1e-43 180.3 192 68.8
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 3.3e-40 168.7 149 83.9
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 3.6e-34 148.7 145 71.0
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 5.2e-33 144.8 111 65.8
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 6.7e-33 144.4 151 72.2
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 2.0e-32 142.9 161 71.4
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.3e-31 140.2 110 62.7
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.7e-31 139.8 113 61.1
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 1.8e-30 136.3 122 59.0
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 3.1e-30 135.6 155 67.7
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 7.0e-30 134.4 121 57.9
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 9.1e-30 134.0 110 60.9
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 2.0e-29 132.9 107 57.9
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 4.5e-29 131.7 108 62.0
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 1.7e-28 129.8 121 57.9
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 3.8e-28 128.6 114 59.6
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 6.5e-28 127.9 107 56.1
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 8.5e-28 127.5 122 54.9
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 1.9e-27 126.3 111 53.2
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 4.2e-27 125.2 111 52.3
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.6e-26 123.2 111 52.3
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 1.6e-26 123.2 150 67.3
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 2.7e-26 122.5 103 55.3
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 2.7e-26 122.5 111 51.4
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.7e-26 122.5 104 53.8
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 3.6e-26 122.1 114 56.1
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 4.7e-26 121.7 120 54.2
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 4.7e-26 121.7 107 54.2
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 4.0e-25 118.6 150 63.3
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 2.0e-24 116.3 111 55.0
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 2.6e-24 115.9 83 66.3
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 3.4e-24 115.5 152 66.4
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 4.4e-24 115.2 155 65.2
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 4.4e-24 115.2 127 55.1
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.7e-24 114.8 115 56.5
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 1.3e-23 113.6 108 54.6
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.2e-23 112.8 108 51.9
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 2.8e-23 112.5 121 55.4
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 4.8e-23 111.7 155 64.5
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 4.8e-23 111.7 160 63.8
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 4.8e-23 111.7 156 67.3
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.4e-22 110.2 114 53.5
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.4e-22 110.2 114 53.5
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.4e-22 110.2 113 54.9
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 1.4e-22 110.2 98 55.1
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.8e-22 109.8 114 52.6
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.8e-22 109.8 87 60.9
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 2.4e-22 109.4 113 54.0
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 2.4e-22 109.4 116 54.3
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 3.1e-22 109.0 116 50.9
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 4.1e-22 108.6 113 52.2
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.1e-22 108.6 114 52.6
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 5.4e-22 108.2 114 52.6
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 7.0e-22 107.8 113 54.0
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 9.1e-22 107.5 113 54.0
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.1e-22 107.5 114 51.8
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.2e-21 107.1 162 61.7
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.2e-21 107.1 162 61.7
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.6e-21 106.7 114 53.5
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.0e-21 106.3 162 61.7
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 2.7e-21 105.9 163 60.1
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 7.7e-21 104.4 158 59.5
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.3e-20 102.8 126 48.4
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 2.3e-20 102.8 106 50.9
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 3.8e-20 102.1 149 62.4
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 6.6e-20 101.3 153 56.9
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 1.9e-19 99.8 120 46.7
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 3.3e-19 99.0 82 59.8
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 3.3e-19 99.0 88 55.7
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 4.2e-19 98.6 112 48.2
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 4.2e-19 98.6 111 50.5
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 4.2e-19 98.6 155 60.0
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.5e-19 98.2 124 48.4
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 9.5e-19 97.4 117 47.9
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 9.5e-19 97.4 126 46.8
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 9.5e-19 97.4 119 47.1
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 9.5e-19 97.4 124 46.8
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 1.2e-18 97.1 124 46.0
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 2.1e-18 96.3 124 44.4
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 2.1e-18 96.3 124 44.4
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 2.1e-18 96.3 124 44.4
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 2.8e-18 95.9 138 52.9
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 3.6e-18 95.5 124 45.2
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 3.6e-18 95.5 124 45.2
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 6.1e-18 94.7 126 44.4
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 6.1e-18 94.7 138 62.3
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 1.8e-17 93.2 108 45.4
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 2.3e-17 92.8 106 77.4
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.9e-17 90.9 74 59.5
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.5e-16 90.1 89 48.3
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 2.0e-16 89.7 102 46.1
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.4e-16 89.0 112 47.3
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 3.7e-15 85.5 114 44.7
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 1.4e-14 83.6 67 58.2
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 5.4e-14 81.6 111 41.4
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 9.2e-14 80.9 100 43.0
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 2.7e-13 79.3 100 42.0
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 5.9e-13 78.2 106 41.5
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 8.9e-09 64.3 56 48.2
Lsat_1_v5_gn_7_15460 Lactuca sativa HOM05D002014 ORTHO05D001958 6.4e-07 58.2 105 40.0
Oeu016058.1 Olea europaea HOM05D002014 ORTHO05D001958 8.3e-07 57.8 78 43.6
Solyc02g036220.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 1.4e-06 57.0 63 49.2
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.4e-06 56.2 97 37.1
Dinv13928 Davidia involucrata HOM05D002014 ORTHO05D001958 4.1e-06 55.5 86 41.9
Sabra10G0176000 Salix brachista HOM05D002014 ORTHO05D001958 4.1e-06 55.5 83 43.4
Sabra10G0176400 Salix brachista HOM05D002014 ORTHO05D001958 4.1e-06 55.5 83 43.4
Solyc02g036240.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 4.1e-06 55.5 66 45.5
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 5.4e-06 55.1 79 41.8
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 5.4e-06 55.1 79 41.8
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 5.4e-06 55.1 79 41.8
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.4e-06 55.1 79 41.8
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 5.4e-06 55.1 79 41.8
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 5.4e-06 55.1 67 44.8
PGSC0003DMG400021488 Solanum tuberosum HOM05D002014 ORTHO05D001958 7.0e-06 54.7 65 46.2
Nn1g07227 Nelumbo nucifera HOM05D002014 ORTHO05D001958 9.2e-06 54.3 93 40.9
Potri.004G007100 Populus trichocarpa HOM05D002014 ORTHO05D001958 9.2e-06 54.3 90 38.9
Solyc02g036180.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 9.2e-06 54.3 66 45.5
Sopen02g011600 Solanum pennellii HOM05D002014 ORTHO05D001958 9.2e-06 54.3 66 45.5


User provided reference genes

Program Settings