Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09187 Corylus avellana HOM05D000275 ORTHO05D000181 2.5e-52 208.4 95 100.0
Cfa011911 Carpinus fangiana HOM05D000275 ORTHO05D000181 8.2e-40 166.8 95 78.9
CiPaw.12G083200 Carya illinoinensis HOM05D033107 ORTHO05D000181 9.1e-15 83.6 92 38.0
Prupe.5G118600 Prunus persica HOM05D000275 ORTHO05D000181 2.0e-14 82.4 88 35.2
Haze_25363 Corylus avellana HOM05D033107 ORTHO05D000181 5.9e-14 80.9 91 38.5
Nn1g09584 Nelumbo nucifera HOM05D000275 ORTHO05D000181 1.7e-13 79.3 88 35.2
Prupe.5G119400 Prunus persica HOM05D000354 ORTHO05D000181 1.7e-13 79.3 88 37.5
Prupe.5G119200 Prunus persica HOM05D000354 ORTHO05D000181 3.8e-13 78.2 88 36.4
Ah.12g052540 Amaranthus hybridus HOM05D002290 ORTHO05D002532 3.2e-12 75.1 83 36.1
TAR636G0501 Trochodendron aralioides HOM05D000275 ORTHO05D000181 9.5e-12 73.6 91 35.2
Manes.02G010200 Manihot esculenta HOM05D000275 ORTHO05D000181 1.6e-11 72.8 87 32.2
Phvul.006G112211 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 2.8e-11 72.0 85 34.1
Actinidia22157 Actinidia chinensis HOM05D000275 ORTHO05D000181 3.6e-11 71.6 84 34.5
PGSC0003DMG400025988 Solanum tuberosum HOM05D000275 ORTHO05D000181 3.6e-11 71.6 80 38.8
Actinidia22158 Actinidia chinensis HOM05D000275 ORTHO05D000181 4.7e-11 71.2 81 34.6
Aqoxy7G00106 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 4.7e-11 71.2 84 33.3
Solyc01g090350.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 4.7e-11 71.2 80 37.5
Sopen01g036140 Solanum pennellii HOM05D000275 ORTHO05D000181 4.7e-11 71.2 80 37.5
Cpa.g.sc96.4 Carica papaya HOM05D002290 ORTHO05D002532 6.1e-11 70.9 86 36.0
MD06G1106500 Malus domestica HOM05D009669 ORTHO05D000181 6.1e-11 70.9 86 32.6
Prupe.2G187100 Prunus persica HOM05D000275 ORTHO05D000181 8.0e-11 70.5 86 34.9
TAR374G1222 Trochodendron aralioides HOM05D000275 ORTHO05D000181 2.3e-10 68.9 86 31.4
PSO210G3257 Papaver somniferum HOM05D000275 ORTHO05D000181 3.0e-10 68.6 89 33.7
MD01G1079700 Malus domestica HOM05D000275 ORTHO05D000181 4.0e-10 68.2 86 32.6
AUR62019837 Chenopodium quinoa HOM05D002290 ORTHO05D002532 6.8e-10 67.4 83 31.3
Ciclev10022824m.g Citrus clementina HOM05D000275 ORTHO05D000181 6.8e-10 67.4 83 34.9
RcHm_v2.0_Chr1g0359331 Rosa chinensis HOM05D000275 ORTHO05D000181 6.8e-10 67.4 85 29.4
Peaxi162Scf00786g00431 Petunia axillaris HOM05D000275 ORTHO05D000181 8.8e-10 67.0 91 30.8
CAN.G1473.26 Capsicum annuum HOM05D000275 ORTHO05D000181 1.2e-09 66.6 80 33.8
PGSC0003DMG400025987 Solanum tuberosum HOM05D000275 ORTHO05D000181 1.2e-09 66.6 80 35.0
Thecc.01G343500 Theobroma cacao HOM05D000275 ORTHO05D000181 1.2e-09 66.6 85 29.4
CAN.G1473.25 Capsicum annuum HOM05D000275 ORTHO05D000181 1.5e-09 66.2 80 35.0
SGA_v2.0_scaffold5G03013 Striga asiatica HOM05D004730 ORTHO05D005705 2.6e-09 65.5 84 31.0
Rhsim13G0125200 Rhododendron simsii HOM05D000275 ORTHO05D010802 3.4e-09 65.1 77 35.1
CANSAT56G2214 Cannabis sativa HOM05D000275 ORTHO05D000181 4.4e-09 64.7 87 26.4
CAN.G986.13 Capsicum annuum HOM05D000275 ORTHO05D000181 4.4e-09 64.7 91 31.9
Dinv32580 Davidia involucrata HOM05D009669 ORTHO05D000181 4.4e-09 64.7 85 35.3
PGR042G1181 Punica granatum HOM05D000275 ORTHO05D000181 4.4e-09 64.7 87 33.3
ATR0765G001 Amborella trichopoda HOM05D000275 ORTHO05D000181 5.7e-09 64.3 86 32.6
Actinidia10131 Actinidia chinensis HOM05D000275 ORTHO05D000181 7.5e-09 63.9 90 31.1
CAN.G1473.29 Capsicum annuum HOM05D000275 ORTHO05D000181 7.5e-09 63.9 80 33.8
Lalb_Chr10g0106431 Lupinus albus HOM05D000275 ORTHO05D000181 7.5e-09 63.9 78 34.6
Potri.014G098000 Populus trichocarpa HOM05D000275 ORTHO05D000181 7.5e-09 63.9 83 26.5
Glyma.03G257200 Glycine max HOM05D000275 ORTHO05D000181 1.3e-08 63.2 82 31.7
Solyc01g090360.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 1.3e-08 63.2 80 32.5
Sopen01g036150 Solanum pennellii HOM05D000275 ORTHO05D000181 1.3e-08 63.2 80 32.5
CANSAT56G1709 Cannabis sativa HOM05D000275 ORTHO05D000181 1.7e-08 62.8 87 25.3
CAN.G1473.30 Capsicum annuum HOM05D000275 ORTHO05D000181 1.7e-08 62.8 80 32.5
MD07G1148600 Malus domestica HOM05D000275 ORTHO05D000181 1.7e-08 62.8 86 30.2
Nitab4.5_0000838g0170 Nicotiana tabacum HOM05D009669 ORTHO05D000181 1.7e-08 62.8 87 32.2
Os11g0115100 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 1.7e-08 62.8 80 31.2
Os12g0114800 Oryza sativa ssp. japonica HOM05D000275 ORTHO05D000181 1.7e-08 62.8 80 31.2
Migut.H00916 Erythranthe guttata HOM05D000275 ORTHO05D000181 2.2e-08 62.4 79 34.2
MD06G1106400 Malus domestica HOM05D000275 ORTHO05D000181 2.2e-08 62.4 70 32.9
Nitab4.5_0004999g0110 Nicotiana tabacum HOM05D009669 ORTHO05D000181 2.8e-08 62.0 87 32.2
AUR62023470 Chenopodium quinoa HOM05D000275 ORTHO05D000181 3.7e-08 61.6 85 29.4
PSO063G4293 Papaver somniferum HOM05D000275 ORTHO05D000181 3.7e-08 61.6 80 30.0
Sc01g0002760 Simmondsia chinensis HOM05D000275 ORTHO05D000181 4.9e-08 61.2 88 30.7
Lalb_Chr15g0076251 Lupinus albus HOM05D000275 ORTHO05D000181 6.3e-08 60.8 82 31.7
CAN.G986.14 Capsicum annuum HOM05D000275 ORTHO05D000181 8.3e-08 60.5 83 34.9
AUR62004483 Chenopodium quinoa HOM05D000275 ORTHO05D000181 8.3e-08 60.5 85 29.4
Ciclev10018033m.g Citrus clementina HOM05D000275 ORTHO05D010802 8.3e-08 60.5 80 31.2
PSO832G2396 Papaver somniferum HOM05D000275 ORTHO05D000181 8.3e-08 60.5 80 28.8
CiPaw.02G040200 Carya illinoinensis HOM05D000275 ORTHO05D000181 1.1e-07 60.1 83 27.7
Cpa.g.c30210.2 Carica papaya HOM05D000275 ORTHO05D010802 1.4e-07 59.7 80 31.2
Cpa.g.sc489.7 Carica papaya HOM05D000275 ORTHO05D010802 1.4e-07 59.7 80 31.2
CsaV3_3G008100 Cucumis sativus L. HOM05D000275 ORTHO05D000181 1.4e-07 59.7 82 28.0
PSO063G5480 Papaver somniferum HOM05D000275 ORTHO05D000181 1.4e-07 59.7 80 28.8
CAN.G986.15 Capsicum annuum HOM05D000275 ORTHO05D000181 1.8e-07 59.3 83 33.7
TAR627G1030 Trochodendron aralioides HOM05D000275 ORTHO05D000181 1.8e-07 59.3 80 28.8
PSO541G4088 Papaver somniferum HOM05D000275 ORTHO05D000181 2.4e-07 58.9 77 29.9
Thecc.06G008800 Theobroma cacao HOM05D000275 ORTHO05D010802 2.4e-07 58.9 80 27.5
TAR627G0711 Trochodendron aralioides HOM05D000275 ORTHO05D000181 2.4e-07 58.9 80 28.8
ATR0213G029 Amborella trichopoda HOM05D000275 ORTHO05D000181 3.1e-07 58.5 86 32.6
Aqoxy2G02542 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 3.1e-07 58.5 84 33.3
Aqoxy4G00405 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 3.1e-07 58.5 74 32.4
Actinidia08273 Actinidia chinensis HOM05D000275 ORTHO05D000181 4.1e-07 58.2 91 28.6
Hma1.2p1_0674F.1_g201540 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 4.1e-07 58.2 80 31.2
PGSC0003DMG400001322 Solanum tuberosum HOM05D000275 ORTHO05D000181 4.1e-07 58.2 79 31.6
Thecc.04G152700 Theobroma cacao HOM05D000275 ORTHO05D000181 4.1e-07 58.2 80 31.2
Aa31sc23G310 Aethionema arabicum HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 31.2
Hma1.2p1_0674F.1_g201550 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 31.2
Hma1.2p1_0674F.1_g201630 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 31.2
Hma1.2p1_0674F.1_g201650 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 31.2
Nitab4.5_0000851g0010 Nicotiana tabacum HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 32.5
Nitab4.5_0006615g0010 Nicotiana tabacum HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 32.5
Nitab4.5_0006615g0020 Nicotiana tabacum HOM05D000275 ORTHO05D000181 5.4e-07 57.8 80 32.5
Hma1.2p1_0674F.1_g201560 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 7.0e-07 57.4 80 31.2
Hma1.2p1_0674F.1_g201620 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 7.0e-07 57.4 80 31.2
Phvul.008G198600 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.0e-07 57.4 80 31.2
Solyc02g087910.3 Solanum lycopersicum HOM05D000275 ORTHO05D000181 7.0e-07 57.4 79 31.6
Sopen02g032630 Solanum pennellii HOM05D000275 ORTHO05D000181 7.0e-07 57.4 79 31.6
Hma1.2p1_0674F.1_g201640 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 9.2e-07 57.0 80 31.2
Hma1.2p1_0674F.1_g201660 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 9.2e-07 57.0 80 31.2
PSO017G0615 Papaver somniferum HOM05D000275 ORTHO05D000181 9.2e-07 57.0 94 27.7
Rhsim02G0104700 Rhododendron simsii HOM05D000275 ORTHO05D003378 9.2e-07 57.0 81 30.9
COL.COLO4_26882 Corchorus olitorius HOM05D000275 ORTHO05D010802 1.2e-06 56.6 80 28.8
HanXRQChr15g0472531 Helianthus annuus HOM05D000275 ORTHO05D000181 1.2e-06 56.6 75 38.7
PSO478G0326 Papaver somniferum HOM05D000275 ORTHO05D000181 1.2e-06 56.6 80 27.5
Ah.08g209500 Amaranthus hybridus HOM05D000275 ORTHO05D000181 1.6e-06 56.2 76 28.9
Cc02_g25070 Coffea canephora HOM05D000275 ORTHO05D000181 1.6e-06 56.2 80 30.0
Nitab4.5_0003696g0090 Nicotiana tabacum HOM05D000275 ORTHO05D000181 1.6e-06 56.2 77 29.9
PSO478G3364 Papaver somniferum HOM05D000275 ORTHO05D000181 1.6e-06 56.2 80 27.5
PGSC0003DMG400020821 Solanum tuberosum HOM05D000275 ORTHO05D000181 1.6e-06 56.2 86 34.9
COL.COLO4_28960 Corchorus olitorius HOM05D000275 ORTHO05D000181 2.0e-06 55.8 80 27.5
Prupe.3G183000 Prunus persica HOM05D000275 ORTHO05D000181 2.0e-06 55.8 80 26.2
TWI23G1017 Tripterygium wilfordii HOM05D000275 ORTHO05D000181 2.0e-06 55.8 80 30.0
PSO017G1555 Papaver somniferum HOM05D000275 ORTHO05D000181 2.7e-06 55.5 80 27.5
COL.COLO4_26881 Corchorus olitorius HOM05D000275 ORTHO05D010802 3.5e-06 55.1 80 27.5
Hma1.2p1_0674F.1_g201610 Hydrangea macrophylla HOM05D000275 ORTHO05D000181 3.5e-06 55.1 80 30.0
Nitab4.5_0006382g0010 Nicotiana tabacum HOM05D000275 ORTHO05D000181 3.5e-06 55.1 77 28.6
Ciclev10024405m.g Citrus clementina HOM05D000275 ORTHO05D000181 5.9e-06 54.3 62 35.5
Lalb_Chr21g0316631 Lupinus albus HOM05D000275 ORTHO05D000181 5.9e-06 54.3 82 28.0
Nitab4.5_0000564g0110 Nicotiana tabacum HOM05D000275 ORTHO05D000181 5.9e-06 54.3 79 30.4
PSO478G2029 Papaver somniferum HOM05D000275 ORTHO05D000181 5.9e-06 54.3 80 27.5
Peaxi162Scf00001g06113 Petunia axillaris HOM05D000275 ORTHO05D000181 7.8e-06 53.9 77 31.2
Peaxi162Scf00129g00232 Petunia axillaris HOM05D000275 ORTHO05D000181 7.8e-06 53.9 79 29.1
Phvul.008G197800 Phaseolus vulgaris HOM05D000275 ORTHO05D000181 7.8e-06 53.9 80 30.0


User provided reference genes

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