Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09103 Corylus avellana HOM05D003558 ORTHO05D004392 0.0e+00 1256.1 620 100.0
Cfa011973 Carpinus fangiana HOM05D003558 ORTHO05D004392 1.7e-61 241.5 128 94.5
QL05p030756 Quercus lobata HOM05D003558 ORTHO05D004392 2.9e-61 240.7 162 77.2
TAR375G0349 Trochodendron aralioides HOM05D003558 ORTHO05D004392 7.2e-60 236.1 164 76.2
COL.COLO4_35445 Corchorus olitorius HOM05D003558 ORTHO05D004392 1.6e-59 235.0 129 90.7
Thecc.05G207600 Theobroma cacao HOM05D003558 ORTHO05D004392 3.6e-59 233.8 128 91.4
CSS0024989 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 4.7e-59 233.4 128 92.2
Lalb_Chr07g0188951 Lupinus albus HOM05D003558 ORTHO05D004392 4.7e-59 233.4 128 91.4
SalBow8G5190 Salvia bowleyana HOM05D003558 ORTHO05D004392 4.7e-59 233.4 127 92.1
TAR374G0657 Trochodendron aralioides HOM05D003558 ORTHO05D004392 4.7e-59 233.4 164 75.0
TAR425G0004 Trochodendron aralioides HOM05D003558 ORTHO05D004392 4.7e-59 233.4 164 75.6
COL.COLO4_08911 Corchorus olitorius HOM05D003558 ORTHO05D004392 6.1e-59 233.0 129 90.7
Duzib128G1157 Durio zibethinus HOM05D003558 ORTHO05D004392 6.1e-59 233.0 128 90.6
MSTRG.1797 Avicennia marina HOM05D003558 ORTHO05D004392 1.0e-58 232.3 128 90.6
Ca_13177_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 1.0e-58 232.3 127 92.1
Ca_18846_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 1.0e-58 232.3 127 92.1
Glyma.08G082000 Glycine max HOM05D003558 ORTHO05D004392 1.0e-58 232.3 128 91.4
Phvul.002G197600 Phaseolus vulgaris HOM05D003558 ORTHO05D004392 1.0e-58 232.3 128 91.4
CSS0022214 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.4e-58 231.9 128 90.6
Cpa.g.sc79.5 Carica papaya HOM05D003558 ORTHO05D004392 1.4e-58 231.9 122 93.4
Lj8A204G66 Lonicera japonica HOM05D003558 ORTHO05D004392 1.4e-58 231.9 128 90.6
Medtr1g016750 Medicago truncatula HOM05D003558 ORTHO05D004392 1.4e-58 231.9 127 92.1
Nn2g12717 Nelumbo nucifera HOM05D003558 ORTHO05D004392 1.4e-58 231.9 127 91.3
Psat6g019440 Pisum sativum HOM05D003558 ORTHO05D004392 1.4e-58 231.9 127 92.1
CSS0001609 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.8e-58 231.5 128 89.8
HanXRQChr14g0460421 Helianthus annuus HOM05D003558 ORTHO05D004392 2.3e-58 231.1 164 73.2
GSVIVG01019594001 Vitis vinifera HOM05D003558 ORTHO05D004392 2.3e-58 231.1 164 74.4
arahy.Tifrunner.gnm1.ann1.HE7D3F Arachis hypogaea HOM05D003558 ORTHO05D004392 3.0e-58 230.7 127 91.3
arahy.Tifrunner.gnm1.ann1.R1RJVJ Arachis hypogaea HOM05D003558 ORTHO05D004392 3.0e-58 230.7 127 91.3
CiPaw.12G080800 Carya illinoinensis HOM05D003558 ORTHO05D004392 3.0e-58 230.7 128 89.8
Prupe.5G124300 Prunus persica HOM05D003558 ORTHO05D004392 3.0e-58 230.7 164 75.0
QL02p029625 Quercus lobata HOM05D003558 ORTHO05D004392 3.0e-58 230.7 128 89.8
Sc01g0010420 Simmondsia chinensis HOM05D003558 ORTHO05D004392 3.0e-58 230.7 128 89.8
Psat0s889g0080 Pisum sativum HOM05D003558 ORTHO05D004392 3.9e-58 230.3 127 91.3
Psat7g261400 Pisum sativum HOM05D003558 ORTHO05D004392 3.9e-58 230.3 127 91.3
VMungo0251G1601 Vigna mungo HOM05D003558 ORTHO05D004392 3.9e-58 230.3 128 90.6
MELO3C016262.2 Cucumis melo HOM05D003558 ORTHO05D004392 5.2e-58 229.9 128 89.8
Dinv38812 Davidia involucrata HOM05D003558 ORTHO05D004392 5.2e-58 229.9 164 74.4
ECA246G0145 Erigeron canadensis HOM05D003558 ORTHO05D004392 5.2e-58 229.9 164 72.6
Lalb_Chr12g0208821 Lupinus albus HOM05D003558 ORTHO05D004392 5.2e-58 229.9 128 90.6
TPR.G13178 Trifolium pratense HOM05D003558 ORTHO05D004392 5.2e-58 229.9 127 91.3
CANSAT21G2039 Cannabis sativa HOM05D003558 ORTHO05D004392 6.7e-58 229.6 161 75.2
Glyma.05G127300 Glycine max HOM05D003558 ORTHO05D004392 6.7e-58 229.6 128 90.6
vmacro21480 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 6.7e-58 229.6 128 90.6
Dinv37501 Davidia involucrata HOM05D003558 ORTHO05D004392 8.8e-58 229.2 128 90.6
MD14G1132800 Malus domestica HOM05D003558 ORTHO05D004392 8.8e-58 229.2 164 74.4
CiPaw.11G117400 Carya illinoinensis HOM05D003558 ORTHO05D004392 1.5e-57 228.4 128 89.8
Lsat_1_v5_gn_3_12881 Lactuca sativa HOM05D003558 ORTHO05D004392 1.5e-57 228.4 127 90.6
MSTRG.13893 Avicennia marina HOM05D003558 ORTHO05D004392 2.0e-57 228.0 128 89.1
CsaV3_4G006830 Cucumis sativus L. HOM05D003558 ORTHO05D004392 2.0e-57 228.0 127 89.8
Eucgr.E00889 Eucalyptus grandis HOM05D003558 ORTHO05D004392 2.0e-57 228.0 128 88.3
Lj4g0003124 Lotus japonicus HOM05D003558 ORTHO05D004392 2.6e-57 227.6 128 89.1
CSS0014298 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 4.4e-57 226.9 128 88.3
Actinidia22742 Actinidia chinensis HOM05D003558 ORTHO05D004392 5.7e-57 226.5 128 89.8
DCAR_006513 Daucus carota HOM05D003558 ORTHO05D004392 5.7e-57 226.5 128 87.5
Sed0022053 Sechium edule HOM05D003558 ORTHO05D004392 5.7e-57 226.5 128 88.3
HanXRQChr15g0472881 Helianthus annuus HOM05D003558 ORTHO05D004392 7.4e-57 226.1 127 89.0
Cc08_g16370 Coffea canephora HOM05D003558 ORTHO05D004392 1.3e-56 225.3 127 89.0
SGA_v2.0_scaffold111G31394 Striga asiatica HOM05D003558 ORTHO05D004392 1.3e-56 225.3 128 89.1
vmacro13883 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 1.3e-56 225.3 128 89.1
Gohir.1Z049372 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.7e-56 224.9 128 89.1
Gohir.A08G223500 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.7e-56 224.9 128 89.1
Gorai.004G260100 Gossypium raimondii HOM05D003558 ORTHO05D004392 1.7e-56 224.9 128 89.1
Sed0010282 Sechium edule HOM05D003558 ORTHO05D004392 1.7e-56 224.9 128 88.3
Ciclev10021697m.g Citrus clementina HOM05D003558 ORTHO05D004392 2.2e-56 224.6 127 88.2
MD06G1111600 Malus domestica HOM05D003558 ORTHO05D004392 2.8e-56 224.2 164 73.8
ATR0602G090 Amborella trichopoda HOM05D003558 ORTHO05D004392 3.7e-56 223.8 128 86.7
ClCG07G011380 Citrullus lanatus HOM05D003558 ORTHO05D004392 3.7e-56 223.8 128 87.5
Nitab4.5_0000357g0410 Nicotiana tabacum HOM05D003558 ORTHO05D004392 3.7e-56 223.8 154 75.3
Solyc08g082700.3 Solanum lycopersicum HOM05D003558 ORTHO05D004392 4.8e-56 223.4 128 87.5
Sopen08g030930 Solanum pennellii HOM05D003558 ORTHO05D004392 4.8e-56 223.4 128 87.5
PGSC0003DMG400012259 Solanum tuberosum HOM05D003558 ORTHO05D004392 4.8e-56 223.4 128 87.5
DCAR_026273 Daucus carota HOM05D003558 ORTHO05D004392 6.3e-56 223.0 128 87.5
Duzib106G0520 Durio zibethinus HOM05D003558 ORTHO05D004392 6.3e-56 223.0 128 88.3
Aqoxy2G02732 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 8.2e-56 222.6 161 73.9
Nn1g00283 Nelumbo nucifera HOM05D003558 ORTHO05D004392 8.2e-56 222.6 127 89.0
Nitab4.5_0002793g0010 Nicotiana tabacum HOM05D003558 ORTHO05D004392 8.2e-56 222.6 171 70.8
Nitab4.5_0003266g0030 Nicotiana tabacum HOM05D003558 ORTHO05D004392 1.1e-55 222.2 153 75.2
CSS0013121 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.4e-55 221.9 128 87.5
Nitab4.5_0002367g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 1.4e-55 221.9 171 70.2
CARHR046430 Cardamine hirsuta HOM05D003558 ORTHO05D004392 1.8e-55 221.5 127 88.2
Duzib177G1044 Durio zibethinus HOM05D003558 ORTHO05D004392 1.8e-55 221.5 129 88.4
PSO170G3792 Papaver somniferum HOM05D003558 ORTHO05D004392 2.4e-55 221.1 127 87.4
COL.COLO4_23475 Corchorus olitorius HOM05D003558 ORTHO05D004392 3.1e-55 220.7 158 74.7
Migut.A00609 Erythranthe guttata HOM05D003558 ORTHO05D004392 3.1e-55 220.7 128 89.1
Peaxi162Scf00074g00546 Petunia axillaris HOM05D003558 ORTHO05D004392 3.1e-55 220.7 127 86.6
PGR042G0055 Punica granatum HOM05D003558 ORTHO05D004392 3.1e-55 220.7 128 84.4
TWI81G0268 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 3.1e-55 220.7 128 86.7
Oeu041397.1 Olea europaea HOM05D003558 ORTHO05D004392 4.1e-55 220.3 128 88.3
RcHm_v2.0_Chr7g0186141 Rosa chinensis HOM05D003558 ORTHO05D004392 4.1e-55 220.3 164 73.2
BcaB07g31471 Brassica carinata HOM05D003558 ORTHO05D004392 5.3e-55 219.9 128 86.7
Lj3g0002122 Lotus japonicus HOM05D003558 ORTHO05D004392 5.3e-55 219.9 127 88.2
BcaB07g31496 Brassica carinata HOM05D003558 ORTHO05D004392 7.0e-55 219.5 127 87.4
PSO017G6909 Papaver somniferum HOM05D003558 ORTHO05D004392 7.0e-55 219.5 127 86.6
A09p14640 Brassica napus HOM05D003558 ORTHO05D004392 9.1e-55 219.2 127 87.4
BraA09t37110Z Brassica rapa HOM05D003558 ORTHO05D004392 9.1e-55 219.2 127 87.4
Sp2g00230 Schrenkiella parvula HOM05D003558 ORTHO05D004392 9.1e-55 219.2 127 87.4
Sp7g00080 Schrenkiella parvula HOM05D003558 ORTHO05D004392 9.1e-55 219.2 128 85.9
Atru.chr9.1940 Acer truncatum HOM05D003558 ORTHO05D004392 1.2e-54 218.8 128 85.9
HPP92_006339 Vanilla planifolia HOM05D003558 ORTHO05D004392 1.6e-54 218.4 127 86.6
EL10Ac5g12950 Beta vulgaris HOM05D003558 ORTHO05D004392 2.0e-54 218.0 128 85.2
Thhalv10023640m.g Eutrema salsugineum HOM05D003558 ORTHO05D004392 2.0e-54 218.0 127 86.6
FvH4_5g11650 Fragaria vesca HOM05D003558 ORTHO05D004392 2.0e-54 218.0 122 90.2
FAN04G1402 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.0e-54 218.0 122 90.2
FAN08G1805 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.0e-54 218.0 122 90.2
FAN18G4084 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.0e-54 218.0 122 90.2
FAN18G4304 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.0e-54 218.0 122 90.2
BcaC04g22576 Brassica carinata HOM05D003558 ORTHO05D004392 2.6e-54 217.6 122 89.3
BcaC04g22613 Brassica carinata HOM05D003558 ORTHO05D004392 2.6e-54 217.6 122 89.3
A09p14400 Brassica napus HOM05D003558 ORTHO05D004392 2.6e-54 217.6 122 89.3
BolC9t54634H Brassica oleracea HOM05D003558 ORTHO05D004392 2.6e-54 217.6 122 89.3
Manes.02G006900 Manihot esculenta HOM05D003558 ORTHO05D004392 2.6e-54 217.6 128 85.2
FAN13G2808 Fragaria x ananassa HOM05D003558 ORTHO05D004392 4.5e-54 216.9 122 89.3
BraA09t37087Z Brassica rapa HOM05D003558 ORTHO05D004392 5.9e-54 216.5 122 88.5
Carub.0002s0023 Capsella rubella HOM05D003558 ORTHO05D004392 7.7e-54 216.1 127 86.6
AUR62007010 Chenopodium quinoa HOM05D003558 ORTHO05D004392 7.7e-54 216.1 128 84.4
AUR62019874 Chenopodium quinoa HOM05D003558 ORTHO05D004392 7.7e-54 216.1 128 84.4
Oeu009980.1 Olea europaea HOM05D003558 ORTHO05D004392 7.7e-54 216.1 128 86.7
Os07g0435100 Oryza sativa ssp. japonica HOM05D003558 ORTHO05D004392 7.7e-54 216.1 122 89.3
C09p17320 Brassica napus HOM05D003558 ORTHO05D004392 1.0e-53 215.7 122 88.5
C09p17720 Brassica napus HOM05D003558 ORTHO05D004392 1.0e-53 215.7 122 88.5
BolC9t54666H Brassica oleracea HOM05D003558 ORTHO05D004392 1.0e-53 215.7 122 88.5
Potri.001G088200 Populus trichocarpa HOM05D003558 ORTHO05D004392 1.0e-53 215.7 122 88.5
Hma1.2p1_0440F.1_g153570 Hydrangea macrophylla HOM05D003558 ORTHO05D004392 1.7e-53 214.9 172 68.6
Manes.01G045195 Manihot esculenta HOM05D003558 ORTHO05D004392 1.7e-53 214.9 128 86.7
THA.LOC104817564 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 1.7e-53 214.9 122 88.5
AL2G10280 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 5.0e-53 213.4 127 85.0
AT1G64520 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 5.0e-53 213.4 127 85.0
AL7G47120 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 6.5e-53 213.0 127 84.3
THA.LOC104809321 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 8.5e-53 212.6 122 87.7
Aa31LG2G1510 Aethionema arabicum HOM05D003558 ORTHO05D004392 1.1e-52 212.2 128 84.4
CAN.G567.30 Capsicum annuum HOM05D003558 ORTHO05D004392 1.1e-52 212.2 128 83.6
Potri.003G142700 Populus trichocarpa HOM05D003558 ORTHO05D004392 1.1e-52 212.2 127 84.3
Hund11374 Selenicereus undatus HOM05D003558 ORTHO05D004392 1.1e-52 212.2 127 83.5
TWI60G0493 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 1.9e-52 211.5 128 82.8
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 2.5e-52 211.1 122 86.1
Ah.12g052830 Amaranthus hybridus HOM05D003558 ORTHO05D004392 3.2e-52 210.7 128 81.2
SEGI_23551 Sequoiadendron giganteum HOM05D003558 ORTHO05D004392 5.5e-52 209.9 161 68.9
Zm00001eb413880 Zea mays HOM05D003558 ORTHO05D004392 5.5e-52 209.9 122 86.1
Sabra03G0103300 Salix brachista HOM05D003558 ORTHO05D004392 9.4e-52 209.1 129 81.4
Zm00001eb121180 Zea mays HOM05D003558 ORTHO05D004392 1.0e-50 205.7 122 84.4
Oeu055020.1 Olea europaea HOM05D003558 ORTHO05D004392 5.2e-50 203.4 127 83.5
Mapoly0071s0017 Marchantia polymorpha HOM05D003558 ORTHO05D004392 8.8e-50 202.6 122 82.8
Pp3c17_21360 Physcomitrium patens HOM05D003558 ORTHO05D004392 8.8e-50 202.6 122 83.6
Pp3c14_17630 Physcomitrium patens HOM05D003558 ORTHO05D004392 1.7e-48 198.4 122 82.0
AagrBONN_evm.TU.Sc2ySwM_228.783 Anthoceros agrestis HOM05D003558 ORTHO05D004392 2.2e-48 198.0 122 81.1
Peaxi162Scf00117g00921 Petunia axillaris HOM05D003558 ORTHO05D004392 3.1e-47 194.1 111 85.6
CBR_g36847 Chara braunii HOM05D003558 ORTHO05D004392 1.0e-45 189.1 122 77.9
Eucgr.E00943 Eucalyptus grandis HOM05D003558 ORTHO05D004392 6.1e-43 179.9 112 79.5
CSS0017714 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 4.0e-42 177.2 120 78.3
Eucgr.E00914 Eucalyptus grandis HOM05D003558 ORTHO05D004392 2.2e-40 171.4 103 82.5
Nitab4.5_0007285g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 9.1e-39 166.0 133 67.7
CSS0031875 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.5e-38 164.1 88 92.0
RcHm_v2.0_Chr2g0138681 Rosa chinensis HOM05D003558 ORTHO05D004392 3.5e-38 164.1 132 70.5
SMO196G0279 Selaginella moellendorffii HOM05D003558 ORTHO05D004392 6.5e-37 159.8 122 68.9
HPP92_027865 Vanilla planifolia HOM05D003558 ORTHO05D004392 1.5e-36 158.7 92 87.0
Eucgr.E00681 Eucalyptus grandis HOM05D003558 ORTHO05D004392 1.0e-34 152.5 133 63.9
FvH4_6g31620 Fragaria vesca HOM05D003558 ORTHO05D004392 1.4e-34 152.1 139 64.7
AT5G42040 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 1.8e-34 151.8 87 86.2
FAN09G0436 Fragaria x ananassa HOM05D003558 ORTHO05D004392 3.4e-33 147.5 130 66.9
Eucgr.E00961 Eucalyptus grandis HOM05D003558 ORTHO05D004392 4.4e-33 147.1 98 77.6
PRCOL_00000075 Prasinoderma coloniale HOM05D003558 ORTHO05D004392 2.7e-30 137.9 131 53.4
Eucgr.E00934 Eucalyptus grandis HOM05D003558 ORTHO05D004392 9.5e-28 129.4 94 71.3
MCO10G293 Micromonas commoda HOM05D003558 ORTHO05D004392 3.6e-27 127.5 122 50.0
Cre17.g708300 Chlamydomonas reinhardtii HOM05D003558 ORTHO05D004392 1.7e-24 118.6 161 43.5
CSS0010814 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.6e-22 112.1 78 75.6
Actinidia22185 Actinidia chinensis HOM05D003558 ORTHO05D005715 1.8e-18 98.6 86 62.8
Sc07g0010140 Simmondsia chinensis HOM05D003558 ORTHO05D004392 2.6e-17 94.7 60 80.0
CSS0046828 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.7e-16 92.0 52 82.7
CSS0000450 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.2e-15 87.8 50 84.0
CSS0004905 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.3e-12 77.8 44 81.8
CSS0029558 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.1e-10 71.2 37 91.9
CSS0047737 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.1e-10 71.2 37 91.9
Aqoxy2G02711 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 2.7e-06 58.2 31 87.1


User provided reference genes

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