Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 2.1e-95 352.4 186 100.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 1.6e-55 219.9 175 69.7
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 8.5e-49 197.6 154 79.2
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 1.2e-42 177.2 151 58.9
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 2.0e-42 176.4 151 58.9
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 5.0e-41 171.8 151 66.9
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 6.5e-41 171.4 150 66.7
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 6.5e-41 171.4 150 57.3
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 1.9e-40 169.9 147 57.8
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 2.5e-40 169.5 163 65.0
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 4.7e-39 165.2 150 67.3
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 6.1e-39 164.9 152 68.4
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.4e-38 163.7 151 58.3
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 5.2e-38 161.8 154 55.8
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 3.1e-35 152.5 166 51.8
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 4.1e-35 152.1 152 55.3
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 7.7e-34 147.9 154 53.2
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 7.7e-34 147.9 106 67.9
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 7.7e-34 147.9 124 59.7
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 1.0e-33 147.5 86 80.2
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 2.2e-33 146.4 154 62.3
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.2e-33 146.4 152 52.6
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 3.8e-33 145.6 158 51.9
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.1e-32 144.1 119 61.3
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 1.9e-32 143.3 99 68.7
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 3.2e-32 142.5 81 76.5
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 4.2e-32 142.1 85 75.3
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 7.2e-32 141.4 84 77.4
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 3.6e-31 139.0 85 75.3
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 4.7e-31 138.7 87 73.6
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 6.1e-31 138.3 73 84.9
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 8.0e-31 137.9 132 55.3
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 1.0e-30 137.5 165 58.8
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.4e-30 137.1 91 71.4
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 2.3e-30 136.3 91 70.3
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 2.3e-30 136.3 73 84.9
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 4.0e-30 135.6 88 72.7
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 4.0e-30 135.6 150 50.7
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 5.2e-30 135.2 75 82.7
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 5.2e-30 135.2 153 51.6
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 6.8e-30 134.8 95 66.3
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 8.8e-30 134.4 75 78.7
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 8.8e-30 134.4 64 90.6
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 1.2e-29 134.0 65 87.7
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 1.2e-29 134.0 83 71.1
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.5e-29 133.7 73 82.2
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 1.5e-29 133.7 65 87.7
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 2.0e-29 133.3 98 65.3
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 2.0e-29 133.3 73 79.5
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 2.0e-29 133.3 67 83.6
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 2.6e-29 132.9 109 63.3
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 2.6e-29 132.9 83 73.5
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 2.6e-29 132.9 93 67.7
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 2.6e-29 132.9 83 73.5
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 2.6e-29 132.9 64 89.1
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 2.6e-29 132.9 69 85.5
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 3.4e-29 132.5 64 89.1
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.4e-29 132.5 72 83.3
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 3.4e-29 132.5 81 72.8
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 4.4e-29 132.1 150 58.7
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 4.4e-29 132.1 76 78.9
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 5.7e-29 131.7 92 67.4
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 7.5e-29 131.3 76 75.0
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 7.5e-29 131.3 96 64.6
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 7.5e-29 131.3 69 82.6
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 7.5e-29 131.3 64 89.1
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 9.8e-29 131.0 77 74.0
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 9.8e-29 131.0 79 70.9
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 9.8e-29 131.0 66 84.8
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 9.8e-29 131.0 84 70.2
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.3e-28 130.6 87 69.0
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.3e-28 130.6 69 81.2
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.7e-28 130.2 150 58.7
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.7e-28 130.2 150 58.7
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.7e-28 130.2 150 58.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 1.7e-28 130.2 64 85.9
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 2.2e-28 129.8 64 87.5
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 2.2e-28 129.8 80 73.8
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 4.8e-28 128.6 65 86.2
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 4.8e-28 128.6 72 76.4
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 4.8e-28 128.6 77 75.3
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 8.3e-28 127.9 65 81.5
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 8.3e-28 127.9 87 66.7
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 3.1e-27 125.9 65 81.5
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 4.1e-27 125.6 64 84.4
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 4.1e-27 125.6 82 68.3
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.1e-27 125.6 77 72.7
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 4.1e-27 125.6 64 84.4
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 4.1e-27 125.6 81 69.1
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 5.4e-27 125.2 81 70.4
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 7.0e-27 124.8 82 68.3
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 7.0e-27 124.8 82 68.3
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.2e-26 124.0 82 68.3
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.2e-26 124.0 82 68.3
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.2e-26 124.0 82 68.3
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 3.5e-26 122.5 81 69.1
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 3.5e-26 122.5 81 69.1
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 4.5e-26 122.1 81 67.9
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 1.1e-24 117.5 73 71.2
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 5.5e-24 115.2 64 78.1
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 2.1e-23 113.2 82 62.2
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 3.6e-23 112.5 79 65.8
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.3e-20 104.0 52 82.7
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 4.9e-20 102.1 74 60.8
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 3.1e-14 82.8 66 51.5
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 2.6e-13 79.7 63 50.8
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 9.5e-08 61.2 53 47.2
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 1.1e-06 57.8 48 54.2


User provided reference genes

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