Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 0.0e+00 1385.5 714 100.0
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 2.1e-249 865.9 633 76.0
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 2.6e-247 859.0 627 76.9
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 1.1e-213 747.3 632 66.5
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.4e-213 746.9 662 63.7
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.4e-213 746.9 662 63.7
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 2.5e-213 746.1 627 67.3
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 1.4e-211 740.3 630 65.7
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 3.9e-211 738.8 643 65.0
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 3.3e-210 735.7 642 64.2
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 4.8e-209 731.9 634 64.7
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.4e-208 730.3 641 65.8
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 1.0e-206 724.2 575 68.5
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.7e-206 723.4 642 65.0
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 3.8e-206 722.2 631 65.3
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 6.5e-206 721.5 641 63.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.1e-205 720.7 638 63.8
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.9e-205 719.9 641 63.5
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.9e-205 719.9 641 63.7
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 3.9e-203 712.2 647 63.4
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 5.1e-203 711.8 646 64.1
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 1.3e-201 707.2 640 63.6
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.4e-200 703.7 639 62.1
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.5e-199 700.3 637 61.9
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 3.8e-198 695.7 640 62.2
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 6.5e-198 694.9 584 67.0
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.2e-197 692.6 637 63.4
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.6e-196 689.1 630 62.9
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 8.8e-195 684.5 626 62.1
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 2.6e-194 682.9 639 60.6
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 5.7e-194 681.8 609 62.4
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 5.7e-194 681.8 635 59.8
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 7.4e-194 681.4 639 59.9
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 4.8e-193 678.7 612 64.4
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 3.5e-191 672.5 638 59.2
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 3.5e-191 672.5 628 62.1
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 1.1e-189 667.5 633 60.5
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.1e-189 667.5 608 60.7
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.9e-189 666.8 578 63.7
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 2.5e-189 666.4 596 61.7
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 3.2e-189 666.0 635 59.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 7.2e-189 664.8 578 63.1
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 2.7e-188 662.9 619 59.9
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 3.6e-188 662.5 595 62.0
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 3.6e-188 662.5 578 63.3
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.0e-187 661.0 627 60.9
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 1.4e-187 660.6 572 62.2
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.4e-187 660.6 572 63.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 3.0e-187 659.4 571 62.9
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 3.4e-186 656.0 636 60.7
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 4.4e-186 655.6 635 59.8
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 9.7e-186 654.4 631 59.4
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.7e-185 653.7 558 63.3
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.7e-185 652.5 641 59.4
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 4.8e-185 652.1 570 61.8
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 1.8e-184 650.2 642 59.0
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 4.1e-184 649.0 635 58.3
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 5.3e-184 648.7 652 58.1
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 9.1e-184 647.9 573 60.9
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 1.6e-183 647.1 595 60.3
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 7.7e-183 644.8 634 56.6
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.2e-182 643.3 633 58.5
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 8.5e-182 641.3 549 64.1
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 2.1e-180 636.7 626 58.5
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.4e-179 634.0 683 56.1
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.8e-179 633.6 451 74.5
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.2e-178 630.9 611 59.4
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 4.8e-177 625.5 611 58.6
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 8.3e-177 624.8 641 58.2
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 2.4e-176 623.2 551 60.4
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 2.0e-175 620.2 567 60.5
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.9e-174 616.3 538 60.8
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 5.0e-174 615.5 644 54.7
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.5e-173 614.0 675 56.1
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 1.9e-173 613.6 628 57.5
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 7.2e-173 611.7 580 60.3
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 2.1e-172 610.1 635 56.1
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.5e-165 587.4 547 61.1
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 5.6e-165 585.5 556 59.5
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 3.9e-158 562.8 640 51.6
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 5.0e-158 562.4 654 51.5
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 9.5e-157 558.1 547 58.0
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 8.3e-153 545.0 565 56.6
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 1.2e-151 541.2 613 53.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.5e-149 534.3 590 54.6
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 3.1e-147 526.6 649 52.2
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 6.8e-147 525.4 599 50.9
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.9e-141 507.3 577 51.5
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 3.6e-132 476.5 298 81.9
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 1.9e-128 464.2 308 76.6
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 7.1e-128 462.2 565 45.5
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 3.4e-122 443.4 578 45.2
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 7.6e-122 442.2 592 42.2
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 2.9e-113 413.7 548 43.6
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.4e-107 394.0 450 48.0
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 8.5e-89 332.4 571 39.8
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 3.5e-82 310.5 221 75.6
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.7e-65 255.0 300 55.3
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 4.0e-62 243.8 317 52.1
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 2.0e-58 231.5 344 45.1
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.8e-57 227.3 199 55.3
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 3.3e-56 224.2 253 49.8
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 1.4e-54 218.8 188 68.6
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 6.4e-52 209.9 273 47.3
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 5.6e-48 196.8 608 29.4
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.3e-46 191.4 307 42.3
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 4.6e-42 177.2 142 70.4
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.3e-38 164.9 274 42.3
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 8.1e-23 113.2 71 88.7
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.4e-22 111.7 102 59.8
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 7.4e-08 63.5 49 75.5


User provided reference genes

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