Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 4.2e-69 264.6 137 100.0
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.1e-60 235.7 142 88.7
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.1e-60 235.7 142 88.7
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 5.3e-48 194.5 143 76.2
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 3.6e-44 181.8 129 79.1
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 2.3e-27 125.9 148 56.1
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 3.9e-27 125.2 148 55.4
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 6.7e-27 124.4 141 56.0
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.0e-26 122.9 151 51.0
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 5.7e-26 121.3 130 58.5
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 4.5e-23 111.7 136 51.5
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 5.9e-23 111.3 145 51.7
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.3e-22 110.2 110 59.1
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.2e-21 105.5 110 58.2
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.2e-21 105.5 110 58.2
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.2e-21 105.5 110 58.2
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 4.2e-21 105.1 139 47.5
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 8.8e-19 97.4 134 50.0
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 8.8e-19 97.4 114 51.8
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.2e-18 97.1 118 52.5
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 3.4e-18 95.5 143 46.9
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 9.7e-18 94.0 137 43.1
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.8e-17 92.4 121 48.8
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.7e-17 92.0 137 43.1
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.4e-16 90.1 139 43.9
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.4e-16 89.4 140 43.6
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 2.4e-16 89.4 140 43.6
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.1e-16 89.0 140 44.3
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 5.3e-16 88.2 113 47.8
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 5.3e-16 88.2 140 43.6
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 5.3e-16 88.2 140 43.6
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 1.6e-15 86.7 119 47.1
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.6e-15 86.7 141 44.7
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.5e-15 85.1 122 44.3
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.0e-14 84.0 140 42.1
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 1.3e-14 83.6 131 46.6
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 1.3e-14 83.6 117 47.9
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.2e-14 82.8 65 63.1
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.2e-14 82.8 65 63.1
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 5.0e-14 81.6 132 43.2
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 5.0e-14 81.6 121 45.5
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 8.5e-14 80.9 125 48.8
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 2.5e-13 79.3 118 47.5
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 4.2e-13 78.6 133 42.9
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 4.2e-13 78.6 104 51.0
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 5.5e-13 78.2 123 43.1
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 5.5e-13 78.2 106 50.9
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.5e-13 78.2 115 44.3
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 7.2e-13 77.8 83 55.4
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 7.2e-13 77.8 83 55.4
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 7.2e-13 77.8 113 45.1
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 4.7e-12 75.1 99 55.6
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.0e-12 74.3 81 54.3
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.0e-11 73.9 62 64.5
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.0e-11 73.9 140 37.9
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 1.4e-11 73.6 108 45.4
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 1.4e-11 73.6 100 45.0
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 2.3e-11 72.8 127 42.5
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.0e-11 72.0 132 41.7
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.0e-11 72.0 112 42.0
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 8.8e-11 70.9 119 43.7
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 1.2e-10 70.5 52 65.4
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 2.0e-10 69.7 132 41.7
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.6e-10 69.3 116 46.6
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 2.6e-10 69.3 104 49.0
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.4e-10 68.9 112 40.2
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 4.4e-10 68.6 102 44.1
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 7.5e-10 67.8 106 46.2
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 9.8e-10 67.4 102 44.1
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.7e-09 66.6 102 39.2
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.7e-09 66.6 102 39.2
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 2.2e-09 66.2 113 43.4
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 2.8e-09 65.9 127 40.2
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 3.1e-08 62.4 92 41.3
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.1e-08 62.4 66 50.0
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 4.1e-08 62.0 72 48.6
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 5.4e-08 61.6 45 64.4
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 7.0e-08 61.2 53 56.6
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.2e-07 60.5 88 43.2
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 1.2e-07 60.5 88 42.0
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 1.2e-07 60.5 160 36.9
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 1.6e-07 60.1 81 46.9
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.6e-07 60.1 109 36.7
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 2.7e-07 59.3 115 36.5
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 2.7e-07 59.3 95 40.0
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 2.7e-07 59.3 50 52.0
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.7e-07 59.3 131 35.1
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 3.5e-07 58.9 131 27.5
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 3.5e-07 58.9 102 39.2
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 4.5e-07 58.5 158 36.7
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 1.0e-06 57.4 115 36.5
Sabra03G0101200 Salix brachista HOM05D007727 ORTHO05D009078 1.7e-06 56.6 109 40.4
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 2.3e-06 56.2 115 35.7
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 6.6e-06 54.7 120 35.0


User provided reference genes

Program Settings